G62796


Basic Information

Item Value
gene id G62796
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 18966083 ~ 18982623 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU84099
GTTccatatataatttatttttttggcttaCCATTTCTGTTATTGTTTATTCTGGCCCCTCCTGAAAGCAAAACACAGACTTCTATCAGGCCTTTCTCATGGCAAACATTTTGACTTGATACAGCAGGAAAAGCACTGGAAAAGTGAACTAATAACTACTTCACTTTATTTACGGTAGATGAAACAGTGAGCCAGCATTTTCACTAAGAGGGCCCTGCacttaaattgtgtgtgtgtgtgtgtgtgtccaactGACACCTTCGTGCTGTATAAAAATATAGTCATATGCAGATAACATTCACTTTCCTATGCTCAATTGACTATGCCCGTAATCAGTTGCGGACAGCTCGGTTTACTTGTTGTAAACATGCAATTTTTTCAGATAAATCTGCAGGAGTCAACTTCCGCAATCTCTGGTGTCCTCATGGAGTCCTCGTCTGACACTTAATCTGTACCGAGGTCGCTGTGGGGTCTCACGCAGTCAGCAAGTTATTACTTTAAGTTTCATTAAAAAGGCCCTTTTAGGTTTTAACTAAATAAGTAAGACTGAACTGCAAACCAAGAGAACCACCAGAGACTACACTGAGCAAATTTAGAGACATTAATATACATCGACTTCTTGGAACCACTTTAATAGAACCAAcagttcaataaaaaaaaaaaataaaaaaaaaaaagaaacgacaagtaaaaacaaaaggaaaggcAGTAAGGCA

Function

GO: NA

KEGG:

id description
ko03040 Spliceosome

RNA

RNA id representative length rna type GC content exon number start site end site
TU84099 True 716 lncRNA 0.38 2 18966083 18982623

Neighbor

gene id symbol gene type direction distance location
LOC120560963 NA coding upstream 3275 18961837 ~ 18962808 (+)
gatc gatc coding upstream 4599 18953824 ~ 18961484 (+)
LOC120560962 NA coding upstream 7105 18958006 ~ 18958978 (+)
sgsm1a sgsm1 coding upstream 13941 18924315 ~ 18952142 (+)
ankrd13a ankrd13a coding upstream 61310 18896623 ~ 18904773 (+)
svopa svop coding downstream 2753 18985376 ~ 18992979 (+)
ssh1a ssh1 coding downstream 19673 19002296 ~ 19022881 (+)
LOC120560931 coro1c,LOC102291280,LOC106937262,LOC107393983,LOC107091240,LOC102218412 coding downstream 46784 19029407 ~ 19074342 (+)
sart3 sart3,LOC102781133 coding downstream 105174 19087797 ~ 19099604 (+)
cmklr1 NA coding downstream 137522 19120145 ~ 19122475 (+)
G62755 NA non-coding upstream 101276 18864575 ~ 18864807 (+)
G62741 NA non-coding upstream 192975 18772755 ~ 18773108 (+)
G62732 NA non-coding upstream 217587 18747490 ~ 18748496 (+)
G62667 NA non-coding upstream 328862 18636726 ~ 18637221 (+)
G62656 lztr1 non-coding upstream 348514 18617074 ~ 18617569 (+)
G62836 NA non-coding downstream 102311 19084934 ~ 19086862 (+)
LOC120560789 NA non-coding downstream 168910 19151533 ~ 19153584 (+)
G63005 LOC104920315,LOC103374896,LOC100704901 non-coding downstream 566787 19549410 ~ 19554906 (+)
G63007 NA non-coding downstream 572760 19555383 ~ 19562350 (+)
G63015 LOC107394186,LOC104941583 non-coding downstream 592938 19575561 ~ 19633642 (+)
mvk mvk,LOC102798305 other upstream 223684 18737518 ~ 18742399 (+)
acacb acacb other upstream 280620 18661157 ~ 18685463 (+)
tpcn1 tpcn1 other upstream 491352 18441347 ~ 18474731 (+)
tbx5b tbx5,LOC103470367 other upstream 546493 18407348 ~ 18419590 (+)
G62513 NA other upstream 634853 18330705 ~ 18331230 (+)
tmem119a LOC103353570,LOC104946818 other downstream 93938 19076561 ~ 19081654 (+)
rasl10a rasl10a other downstream 447778 19430401 ~ 19448950 (+)
c6h2orf68 c21h2orf68,c9h2orf68,LOC104941594,LOC103363183,LOC104920309 other downstream 776973 19759596 ~ 19763524 (+)
vps13a vps13a other downstream 1418324 20400947 ~ 20442093 (+)
wdr31 wdr31,LOC102796061 other downstream 1491028 20473651 ~ 20490586 (+)

Expression


Co-expression Network