mapk1 (mapk1,LOC103371039,LOC107386038)


Basic Information

Item Value
gene id mapk1
gene name mapk1,LOC103371039,LOC107386038
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 32440375 ~ 32470827 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU88699
GGTGAATTTGTGTTTTAAGCCAAGAtaaacaatttgtttgtgtctcAAAGGCATTCGGCTATGGCTATTCCTATTCAAGACCTTTTATGTCCAGGTGAATGACCGTGATAGActagctgttgtgttttttggtGCAACGGTCGTGGTTATAACTCAGCCTACATTGCACAAACAAGCAACAGTAGATTACTAAGAATCATCCATCATAAAAAGGGGGTCTTTTGAATTTTCTAACCTTTGTCGCACTGTTACAAGGGGTACCTTgatctttatctttttttttttctctctttatcgctttgaaaaaagaaaaactgaattaaAATAACTGATTTATGCAATGAAATCACATAATCAgtcacagacaaaaaaaaagggccAAAAGCCATCACTTGAAGTTGAGGATCTATATTTTAACAAATACCTATTTTaatccttcacacacacacacacggcccaAATGCAAG
>XM_039803502.1
CTCCGCTACTCGCTCCTGCCTGCGACAGCACAGCAGTGGTGTGGTCGCTCTGAACGCACATTAacggaaagaagaaaaacactaaGTGAAGGCCTTTACCACACCGAAAACTGTTGCAGTCACAGCGACGACggatataaaaacacatttatttgttttctaaTCTTAGTTGCTGTGTTTTTCATTTGATAGccttgtaaaaaaagaaaaaagccagAGCTCATAATGGCGACAGCTGCGGTGTCTGCCCCTGCTGGCTGCGGCCCCAGCCCCGGGTCGGGAACAGAGCTGGTCCGCGGGCAGGCCTTCGACGTCGGGCCTCGGTACAGCAACCTCTCCTACATCGGGGAGGGAGCCTACGGCATGGTGTGCTCTGCCTATGACCGGGACAACAAGATACGTGTGGCCATTAAGAAGATTAGCCCTTTTGAGCACCAGACGTACTGCCAACGCACCCTGAGAGAGATCAAAATCCTGCTGCGCTTCAAACATGAAAACATCATCGGCATCAACGACATCATCCGCACACCAACCATTGACCAGATGAAGGACGTATATATTGTCCAGGATCTCATGGAGACAGACCTGTACAAGCTCCTGAAGACTCAACACCTGAGCAACGACCACATCTGCTACTTCCTCTACCAGATCCTACGAGGGCTCAAGTACATCCACTCTGCCAACGTCCTGCATCGCGACCTGAAGCCCTCCAACCTTCTGCTTAACACCACCTGTGATCTCAAGATCTGTGATTTTGGTTTGGCTCGTGTGGCTGATCCTGACCATGATCACACTGGTTTCCTGACAGAGTATGTAGCCACCCGTTGGTACAGAGCACCTGAGATCATGCTCAACTCCAAGGGCTATACCAAGTCCATAGACATCTGGTCAGTGGGTTGCATCCTGGCTGAGATGTTGTCCAACAGGCCAATCTTTCCTGGGAAGCACTACTTGGATCAGCTTAACCACATTTTGGGGATCCTGGGTTCTCCCTCTCAGGAGGATCTCAACTGCATCATCAACATTAAGGCCAGGAACTATCTTTTGTCGCTGCCTTTGCGCTGCAAAGTGCCGTGGAACCGCCTCTTCCCCAACGCTGATCCCAAAGCTTTGGACCTGTTGGACAAGATGTTAACCTTTAATCCTCACAAGAGGATTGAGGTGGAGGAGGCCCTGGCGCACCCTTACCTGGAGCAGTATTACGACCCCACGGATGAGCCTGTTGCCGAGGCCCCATTCAAGTTTGACATGGAGCTGGATGACTTACCCAAAGAGACGCTGAAGGAGCTCATCTTTAAAGAAACTGCACGTTTCCAGTCCGGCTTAAGGTCCTAACATCTCACACAGATGTTTCTGTGGACCGGCTTTGGCATTgctactcctcctcctcacctccACACTTTTgctgtgatatatatatatatttttgggggttttattTTACTATCCTGTTGTCCACATCACCTGGATTCCTTGGGTCTCACTCGTCAAATCCAATTTGCTCAGGAATGGCGTCaggaatcaatcaatcaaccattctcttgtctctctttctatttctcttttctcgctctctccctgaggtgggtgggggggggggcaggggtTCAACATCACAGCTTACAGTTTGGGGGTGAATTTGTGTTTTAAGCCAAGAtaaacaatttgtttgtgtctcAAAGGCATTCGGCTATGGCTATTCCTATTCAAGACCTTTTATGTCCAGGTGAATGACCGTGATAGActagctgttgtgttttttggtGCAACGGTCGTGGTTATAACTCAGCCTACATTGCACAAACAAGCAACAGTAGATTACTAAGAATCATCCATCATAAAAAGGGGGTCTTTTGAATTTTCTAACCTTTGTCGCACTGTTACAAGGGGTACCTTgatctttatctttttttttttctctctttatcgctttgaaaaaagaaaaactgaattaaAATAACTGATTTATGCAATGAAATCACATAATCAgtcacagacaaaaaaaaagggccAAAAGCCATCACTTGAAGTTGAGGATCTATATTTTAACAAATACCTATTTTaatccttcacacacacacacacggcccaAATGCAAGta

Function

symbol description
mapk1 Predicted to enable MAP kinase activity. Acts upstream of or within gastrulation. Predicted to be active in cytoplasm and nucleus. Is expressed in several structures, including EVL; brain; cardiovascular system; retina; and superficial blastomere. Human ortholog(s) of this gene implicated in Noonan syndrome 13; adenocarcinoma (multiple); pulmonary hypertension; and renal cell carcinoma. Orthologous to human MAPK1 (mitogen-activated protein kinase 1).

NR:

description
PREDICTED: mitogen-activated protein kinase 1

GO:

id name namespace
GO:0000165 MAPK cascade biological_process
GO:0006468 protein phosphorylation biological_process
GO:0007369 gastrulation biological_process
GO:0005524 ATP binding molecular_function
GO:0004707 MAP kinase activity molecular_function

KEGG:

id description
K04371 ERK, MAPK1_3; mitogen-activated protein kinase 1/3

RNA

RNA id representative length rna type GC content exon number start site end site
TU88699 False 467 lncRNA 0.36 1 32470359 32470825
XM_039803502.1 True 2101 mRNA 0.47 9 32440375 32470827

Neighbor

gene id symbol gene type direction distance location
rufy3 rufy3 coding upstream 13993 32404387 ~ 32426382 (+)
smarca2 smarca2 coding upstream 473641 31906122 ~ 31966734 (+)
dmrt2a dmrt2 coding upstream 614657 31820669 ~ 31825718 (+)
dmrt1 NA coding upstream 637922 31770292 ~ 31802453 (+)
kank1a kank1 coding upstream 682871 31699526 ~ 31757504 (+)
trnap-ugg NA coding downstream 100861 32571688 ~ 32571759 (+)
ascc2 ascc2 coding downstream 144065 32614892 ~ 32626689 (+)
LOC120560720 sec14l2 coding downstream 166009 32636836 ~ 32659330 (+)
rusc2 rusc2,LOC104944866 coding downstream 383887 32854714 ~ 32901547 (+)
wdfy3 NA coding downstream 486402 32957229 ~ 33070510 (+)
G66255 NA non-coding upstream 149356 32290772 ~ 32291019 (+)
G66253 NA non-coding upstream 191135 32249001 ~ 32249240 (+)
LOC120561307 NA non-coding upstream 676602 31759188 ~ 31763773 (+)
G66117 NA non-coding upstream 930019 31461798 ~ 31510356 (+)
G66294 NA non-coding downstream 358 32471185 ~ 32474048 (+)
G66295 NA non-coding downstream 3660 32474487 ~ 32475080 (+)
G66293 NA non-coding downstream 40792 32511619 ~ 32515505 (+)
G66319 NA non-coding downstream 142172 32612999 ~ 32613908 (+)
LOC120560708 NA non-coding downstream 214442 32685269 ~ 32694087 (+)
G66263 LOC106536102 other upstream 70391 32364860 ~ 32369984 (+)
G66256 slc4a5,LOC102211952,LOC101484802 other upstream 110385 32322507 ~ 32329990 (+)
adamts3 adamts3,LOC100699019,LOC101479253,LOC102313231 other upstream 230841 32032576 ~ 32209534 (+)
G66231 NA other upstream 303409 32126293 ~ 32136966 (+)
dmrt3a dmrt3 other upstream 628822 31807795 ~ 31811553 (+)
LOC120560610 ypel1,ypelc,YPEL1,ypeld,LOC103374080,LOC106586007,LOC106931471 other downstream 6211 32477038 ~ 32510737 (+)
slc39a14 slc39a14 other downstream 101373 32572200 ~ 32612938 (+)
cds1 cds1,LOC103364266,LOC106922331,LOC103134889,LOC107386064 other downstream 606419 33077246 ~ 33112816 (+)
antxr2a antxr2 other downstream 1046772 33517599 ~ 33603625 (+)
G66578 NA other downstream 1305098 33775925 ~ 33776398 (+)

Expression


Co-expression Network