dmrt1


Basic Information

Item Value
gene id dmrt1
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 31770292 ~ 31802453 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039804489.1
TTTCCTCCCACAAGTCACAGCAGCAGGGCGGGGAGGGACGGTGACCTTATAGCCTCTATCGTGGCACCAGTACAGGGCTTTAACCAGCCGAGCCTGCTGGGACGAACCCTTTAGTTGCTAAAGTCTGACTTTTGTTGTTCTTGGgtagtttagttttttgttgaGGTTTTATTATTCCAGTAGACATGAGTAAGGACAAGCAGAGCAAGCAGGTGCCGGAGTGCACCGGACCTCTGTCCCCATCTAAAGGCCAGAAACCCCCGAGAATGCCCAAGTGCTCCCGGTGTAGGAACCATGGCTACGTGTCTCCTCTGAAGGGACACAAGCGCTTCTGCAACTGGAGGGACTGTCAGTGTCCCAAATGCAAACTGATAGCTGAGAGGCAAAGAGTCATGGCGGCCCAGGTCGCCCTGAGACGGCAGCAGGCTCAGGAGGAGGAGCTTGGGATTTGTAGTCCGGTGTCTCTGACTGGCCCTGAGGTGATGGTAAAAAATGAAGCTGGAGCAGACTGCTTGTTCTCTTTGGAGGGACGATCCCCAACTCCAACCAGTACCTCTACTTCTTCTCATGCTGTCACAGGGAGTCGCTCGGCATTGTCCCCCAGCCCGTCAGCTGGTGCCCGCGCTCATACTGAGGGATCGGCAGACCTGCTGCTGGAAACTTCCTATTACAACTTCTACCAGCCTTCCCGCTACCCCACCTATTACGGCAACCTCTACAACTACCAGCAATACCAGCAGATGCCCCATGGTGATGGCCGCGTGTCTAGCCACAACATGTCTTCTCAGTACCGCATGCATTCCTACTACCCAGCAGCCACCTACTTGAGTCAGGGCCTGGGCTCCACCACCTGTGTGCCACCCCTCTTCAGCAtcgacgacaacaacaacaacaacaataacaacaactgCTCTGAGACAATGGCAGCCTCCTTCTCCCCCAGCAGCATCACCACTGGTCACGACTCCACCATGACCTGCAGGTCCATCAGCTCCCTGGTTAACTCCGATGTCAGTGCTGAGTGCGAGGTCGGCAGCGAGACGCCAAACTTCACCATCGACTCCATCATCGATGGTGACGCCACCAAATAAAAGAAGCTAAGGATAACTTTACACAACAAAAGCATTTACGAGATCAGTTGATTAAAGTTACTGCAGTTACTGTTTGCTGCAggtttctctgtttctgtccAGGAGGCACGATAACGTATTTTCCACACCGTAGTTGAGAATACAGGTTGTCTTCGTATTTTAGCTAATTTTTAgctgttaaatgttttattgaagCCAGTTCACCAGCATAGAAAGTGCTCGGAAAGTAAAACAATGTACACGTTTACAAATAACATGCAATTACTTGAGAAGCATTCTCCAGAAGATAAAGATAACCAAACATACATTGAATAAGTCTCTTGATTATCAGTAATCAAGATTGGACCAAATTATTCAAACTAGACGGTTGTACACTAGTTTTTCCTCTTCGGAATTAGGCTGTTTGGATGAACCCTTTATAAAGGCGACTAAACGTAGAGTAAATAAGTGacgtgttgtgtttttgtaaaattgtaCCCTTGTTTTTCCTTTTCGGAAAGCAACTGTTAATGCAAAgtgaagtattttttttattatccaaAAGATAAAGTGACGCAACATGCTGAATAATGGTATTCAAATCCTTTTCTAGCATGCAGTAAAATTGACCAGTGCAGTTTTGACACGGTATGGTATTAGTGGACGATCTTTTGACAATCAGAATACAGGCTTAGTGTTTGCAATCACCGTTACTTTACATCTCAAGCACTTATTTAGAAATTTTCAAAGGCTAAATTTGGCCAAGTGCCCTGGTTGACATGCAATACATGTAGCATTATTTAGCAATAGCAATTGTTTTTTAGTTTGTattagtttattgtttttcagcTTTTGAAGTCTGTTTTGTGGTCCAGTTAACCAGTAGACAAAGTTGAGCCCATCCTTTTTAGTAAGCACTGATTTGGTGATTTGCAGGTCAAAAGATGTCAAGGTTAAATAGTAACTCAACACCAGGCTGAATAGCAGCGTTTTTCTGCCCTTTTTGGTTGACAGTTTCAAGTGGGTTTCACCTGTGTTACCAAACCCAACTGTGATGTCACGGTGCACCGACACACCCAGGAGTACACATCTACATCACTGCAACAAAGGGGAGAAGTTAAACCACTGGAGGTCAGCAAAATAAAGACGTTCAGGGGGTGTTAGGCTACATATAATAGTTGTTTCAACAGTATTTAAGtgactgtgtatatatatatatatatatatatatatatatatatatatatatatatatatatttatgtatataaatatataaatattgtcaTTAAGACTTTGTAAAAAACGGATACTGGATTTTTGAGGATGAAATTTTTGAGGATGCTAAAAAACTTTTAGCATACATCGGATGCCAATTTTTCATAGACACATAAACATTTTTGATAAGGATTCCTTAAATTTTAACAAATTGTGACAATTAAGATAAGGTATATTTTATCAGACGTTATATAAACTAATTCATCTGGTGGTTTATTTAATGGTTTCCAAATTATTTCAAACATttctttggcatttctgtactGCAATTACTTGTTGACATGTACACCACTATGAATATATCTGCTGAAATTGGATAGCCTGAACTATTTATCCACCTAGCTCTATCAAAAACTTTCAAACCAAATATTGCCCAGATTTATGCCTAAACTAATGCCAAAGACATCTTTTGACCTGTTTGTACAGTATGAACAACGATCAGATAGTTTTGGAAAAATATGTGAAAacggcatttccttttgtccggtataaataaatgtgtcactgaattaaagtagaaaacaTCTCTGATAGAGACTCTGGGATATCCTCCTGCAGGACGACGTGTGACTGGAGGGTTAGCGGGGAGAAAAACAGGCAGGTTAGACATAAATCATGTTTCCCTCCGTTGCGTTGGCATGTGATGAGCACCGGCTGCTTATTTATGGCACCGATCCAGCAGCATCATTTATTCCACAGAATTTGCATGTCTATTGTATATTTAACCCCTTCAGGCCTGGAGTTTTACTGAACACATGGGTTACTGTTTACACAGCTTGGTACGGCCTTGTAGATACAGCGGTAGCTGAGGACCTGGATTTGTAGCAGTGATGTGTAGAGTTGAAACAATTTGTTGATTAGTTGACCCAGAAAATGAATCAGCAACCATTTGATAATCAGTTAATcatttaaggcatttttcaaGCAATGTTGTCTTAAATTGAAGTCAATTTTCTTTTGGATTTGGACTGTTGTGTGATGTCACTTTGGGATCTGGGAAAATGCCACTTTGCATTGTTTTCTGATGCTTTATAGACCAAAtaactaatcaattaataaataaataattagattaatctataataaaaaatgtcaaaaaattgttagttgtgtttttttaacataaataccTGGTCACAGTTTTGCTTTGTGTAAGTAAATACCCCAAAAGCAGTTTTTTCATTCCATGAACTAATGAATGTAATCCTGTGTTGCCCACTTTTGAGTTGTGTTGTTTGagtgttaattaaaaaaaacaactcatatGAGATTTTGCCAACTTTTCTGCCTTTGTGAAGCCGACTAGTACACCACTGTACTGCATATCGttgatgtgttttgtgttttatgtagATTCATTTCCAATTGCATGCTTTGaaagtgtttatttgtgtttgcGTTTGAATAAGACAGCAACAAAAGTAATTTGGAGTCTCGGAGTTTATGTCGCTACAACTTTTAGGTAAATAAAAACGCTTTAAAGtgatggagtgtaaatgtgatGCTGGAAACAACAATATAAAACAGACAAAGAGAA
>XM_039804490.1
TTTCCTCCCACAAGTCACAGCAGCAGGGCGGGGAGGGACGGTGACCTTATAGCCTCTATCGTGGCACCAGTACAGGGCTTTAACCAGCCGAGCCTGCTGGGACGAACCCTTTAGTTGCTAAAGTCTGACTTTTGTTGTTCTTGGgtagtttagttttttgttgaGGTTTTATTATTCCAGTAGACATGAGTAAGGACAAGCAGAGCAAGCAGGTGCCGGAGTGCACCGGACCTCTGTCCCCATCTAAAGGCCAGAAACCCCCGAGAATGCCCAAGTGCTCCCGGTGTAGGAACCATGGCTACGTGTCTCCTCTGAAGGGACACAAGCGCTTCTGCAACTGGAGGGACTGTCAGTGTCCCAAATGCAAACTGATAGCTGAGAGGCAAAGAGTCATGGCGGCCCAGGTCGCCCTGAGACGGCAGCAGGCTCAGGAGGAGGAGCTTGGGATTTGTAGTCCGGTGTCTCTGACTGGCCCTGAGGTGATGGTAAAAAATGAAGCTGGAGCAGACTGCTTGTTCTCTTTGGAGGGACGATCCCCAACTCCAACCAGTACCTCTACTTCTTCTCATGCTGTCACAGGGAGTCGCTCGGCATTGTCCCCCAGCCCGTCAGCTGGTGCCCGCGCTCATACTGAGGGATCGGCAGACCTGCTGCTGGAAACTTCCTATTACAACTTCTACCAGCCTTCCCGCTACCCCACCTATTACGGCAACCTCTACAACTACCAGCAATACCAGATGCCCCATGGTGATGGCCGCGTGTCTAGCCACAACATGTCTTCTCAGTACCGCATGCATTCCTACTACCCAGCAGCCACCTACTTGAGTCAGGGCCTGGGCTCCACCACCTGTGTGCCACCCCTCTTCAGCAtcgacgacaacaacaacaacaacaataacaacaactgCTCTGAGACAATGGCAGCCTCCTTCTCCCCCAGCAGCATCACCACTGGTCACGACTCCACCATGACCTGCAGGTCCATCAGCTCCCTGGTTAACTCCGATGTCAGTGCTGAGTGCGAGGTCGGCAGCGAGACGCCAAACTTCACCATCGACTCCATCATCGATGGTGACGCCACCAAATAAAAGAAGCTAAGGATAACTTTACACAACAAAAGCATTTACGAGATCAGTTGATTAAAGTTACTGCAGTTACTGTTTGCTGCAggtttctctgtttctgtccAGGAGGCACGATAACGTATTTTCCACACCGTAGTTGAGAATACAGGTTGTCTTCGTATTTTAGCTAATTTTTAgctgttaaatgttttattgaagCCAGTTCACCAGCATAGAAAGTGCTCGGAAAGTAAAACAATGTACACGTTTACAAATAACATGCAATTACTTGAGAAGCATTCTCCAGAAGATAAAGATAACCAAACATACATTGAATAAGTCTCTTGATTATCAGTAATCAAGATTGGACCAAATTATTCAAACTAGACGGTTGTACACTAGTTTTTCCTCTTCGGAATTAGGCTGTTTGGATGAACCCTTTATAAAGGCGACTAAACGTAGAGTAAATAAGTGacgtgttgtgtttttgtaaaattgtaCCCTTGTTTTTCCTTTTCGGAAAGCAACTGTTAATGCAAAgtgaagtattttttttattatccaaAAGATAAAGTGACGCAACATGCTGAATAATGGTATTCAAATCCTTTTCTAGCATGCAGTAAAATTGACCAGTGCAGTTTTGACACGGTATGGTATTAGTGGACGATCTTTTGACAATCAGAATACAGGCTTAGTGTTTGCAATCACCGTTACTTTACATCTCAAGCACTTATTTAGAAATTTTCAAAGGCTAAATTTGGCCAAGTGCCCTGGTTGACATGCAATACATGTAGCATTATTTAGCAATAGCAATTGTTTTTTAGTTTGTattagtttattgtttttcagcTTTTGAAGTCTGTTTTGTGGTCCAGTTAACCAGTAGACAAAGTTGAGCCCATCCTTTTTAGTAAGCACTGATTTGGTGATTTGCAGGTCAAAAGATGTCAAGGTTAAATAGTAACTCAACACCAGGCTGAATAGCAGCGTTTTTCTGCCCTTTTTGGTTGACAGTTTCAAGTGGGTTTCACCTGTGTTACCAAACCCAACTGTGATGTCACGGTGCACCGACACACCCAGGAGTACACATCTACATCACTGCAACAAAGGGGAGAAGTTAAACCACTGGAGGTCAGCAAAATAAAGACGTTCAGGGGGTGTTAGGCTACATATAATAGTTGTTTCAACAGTATTTAAGtgactgtgtatatatatatatatatatatatatatatatatatatatatatatatatatatttatgtatataaatatataaatattgtcaTTAAGACTTTGTAAAAAACGGATACTGGATTTTTGAGGATGAAATTTTTGAGGATGCTAAAAAACTTTTAGCATACATCGGATGCCAATTTTTCATAGACACATAAACATTTTTGATAAGGATTCCTTAAATTTTAACAAATTGTGACAATTAAGATAAGGTATATTTTATCAGACGTTATATAAACTAATTCATCTGGTGGTTTATTTAATGGTTTCCAAATTATTTCAAACATttctttggcatttctgtactGCAATTACTTGTTGACATGTACACCACTATGAATATATCTGCTGAAATTGGATAGCCTGAACTATTTATCCACCTAGCTCTATCAAAAACTTTCAAACCAAATATTGCCCAGATTTATGCCTAAACTAATGCCAAAGACATCTTTTGACCTGTTTGTACAGTATGAACAACGATCAGATAGTTTTGGAAAAATATGTGAAAacggcatttccttttgtccggtataaataaatgtgtcactgaattaaagtagaaaacaTCTCTGATAGAGACTCTGGGATATCCTCCTGCAGGACGACGTGTGACTGGAGGGTTAGCGGGGAGAAAAACAGGCAGGTTAGACATAAATCATGTTTCCCTCCGTTGCGTTGGCATGTGATGAGCACCGGCTGCTTATTTATGGCACCGATCCAGCAGCATCATTTATTCCACAGAATTTGCATGTCTATTGTATATTTAACCCCTTCAGGCCTGGAGTTTTACTGAACACATGGGTTACTGTTTACACAGCTTGGTACGGCCTTGTAGATACAGCGGTAGCTGAGGACCTGGATTTGTAGCAGTGATGTGTAGAGTTGAAACAATTTGTTGATTAGTTGACCCAGAAAATGAATCAGCAACCATTTGATAATCAGTTAATcatttaaggcatttttcaaGCAATGTTGTCTTAAATTGAAGTCAATTTTCTTTTGGATTTGGACTGTTGTGTGATGTCACTTTGGGATCTGGGAAAATGCCACTTTGCATTGTTTTCTGATGCTTTATAGACCAAAtaactaatcaattaataaataaataattagattaatctataataaaaaatgtcaaaaaattgttagttgtgtttttttaacataaataccTGGTCACAGTTTTGCTTTGTGTAAGTAAATACCCCAAAAGCAGTTTTTTCATTCCATGAACTAATGAATGTAATCCTGTGTTGCCCACTTTTGAGTTGTGTTGTTTGagtgttaattaaaaaaaacaactcatatGAGATTTTGCCAACTTTTCTGCCTTTGTGAAGCCGACTAGTACACCACTGTACTGCATATCGttgatgtgttttgtgttttatgtagATTCATTTCCAATTGCATGCTTTGaaagtgtttatttgtgtttgcGTTTGAATAAGACAGCAACAAAAGTAATTTGGAGTCTCGGAGTTTATGTCGCTACAACTTTTAGGTAAATAAAAACGCTTTAAAGtgatggagtgtaaatgtgatGCTGGAAACAACAATATAAAACAGACAAAGAGAA

Function

NR:

description
doublesex- and mab-3-related transcription factor 1

GO:

id name namespace
GO:0006355 regulation of transcription, DNA-templated biological_process
GO:0005634 nucleus cellular_component
GO:0043565 sequence-specific DNA binding molecular_function
GO:0003700 DNA-binding transcription factor activity molecular_function

KEGG:

id description
K19488 DMRT1; doublesex- and mab-3-related transcription factor 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039804489.1 True 3885 mRNA 0.40 5 31770292 31802453
XM_039804490.1 False 3882 mRNA 0.40 5 31770292 31802453

Neighbor

gene id symbol gene type direction distance location
kank1a kank1 coding upstream 12788 31699526 ~ 31757504 (+)
ctsla LOC104932682 coding upstream 95177 31670525 ~ 31675115 (+)
dapk1 dapk1 coding upstream 110025 31570042 ~ 31660267 (+)
LOC120560726 LOC103353430,LOC108242814,LOC103397877 coding upstream 205129 31513308 ~ 31565163 (+)
LOC120560109 NA coding upstream 280766 31485063 ~ 31489526 (+)
dmrt2a dmrt2 coding downstream 18216 31820669 ~ 31825718 (+)
smarca2 smarca2 coding downstream 103669 31906122 ~ 31966734 (+)
rufy3 rufy3 coding downstream 601934 32404387 ~ 32426382 (+)
trnap-ugg NA coding downstream 769235 32571688 ~ 32571759 (+)
ascc2 ascc2 coding downstream 812439 32614892 ~ 32626689 (+)
LOC120561307 NA non-coding upstream 6519 31759188 ~ 31763773 (+)
G66117 NA non-coding upstream 259936 31461798 ~ 31510356 (+)
LOC120560111 LOC108434293 non-coding upstream 285291 31478501 ~ 31485001 (+)
G66107 NA non-coding upstream 352032 31409955 ~ 31418260 (+)
G66092 LOC103362337,LOC101472255,LOC102204493,LOC102311726,LOC100707713 non-coding upstream 361136 31351198 ~ 31409156 (+)
G66253 NA non-coding downstream 446548 32249001 ~ 32249240 (+)
G66255 NA non-coding downstream 488319 32290772 ~ 32291019 (+)
G66294 NA non-coding downstream 668732 32471185 ~ 32474048 (+)
G66295 NA non-coding downstream 672034 32474487 ~ 32475080 (+)
G66293 NA non-coding downstream 709166 32511619 ~ 32515505 (+)
LOC120561064 NA other upstream 877012 30857580 ~ 30893280 (+)
G65899 taok3 other upstream 1192133 30574086 ~ 30578159 (+)
LOC120560820 NA other upstream 1518773 30246887 ~ 30251519 (+)
fbxo21 fbxo21 other upstream 1558184 30186848 ~ 30212108 (+)
ubac1 ubac1 other upstream 2418536 29344580 ~ 29351756 (+)
dmrt3a dmrt3 other downstream 5342 31807795 ~ 31811553 (+)
adamts3 adamts3,LOC100699019,LOC101479253,LOC102313231 other downstream 230123 32032576 ~ 32209534 (+)
G66231 NA other downstream 323840 32126293 ~ 32136966 (+)
G66256 slc4a5,LOC102211952,LOC101484802 other downstream 520054 32322507 ~ 32329990 (+)
G66263 LOC106536102 other downstream 562407 32364860 ~ 32369984 (+)

Expression


Co-expression Network