ctsla (LOC104932682)


Basic Information

Item Value
gene id ctsla
gene name LOC104932682
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 31670525 ~ 31675115 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039804358.1
AATTGGGGGCGGGgcagaccaatcagagagcTCGGTGGGACGTTCTTCAGCGGCCAGCCAGGCCTTTATAAACTTGGCGTACCTCGACCAAAGGATATCTTCTGCTTCGTCTTCATCCTCGACTTGGAAGAATATACATATATAGCAACAATGCTGCCTCTAGCCGTGTTGGTCGTGTGCCTTAGCGCAGCCTTCTCCGCCCCCAGCCTGGACCGTCAGCTGGATGACCACTGGGACCTGTGGAAGAGCTGGCACAGTAAAAATTATCATGAgaaGGAGGAGGGCTGGAGGAGAATGGTGTGGGAGAAGAACCTGAGGAAGATTGAGATGCACAACCTGGAGCACTCCATGGGCGCACACACTTACCGCCTGGGCATGAACCACTTTGGAGACATGACTTACGAGGAGTTCAGGCAGATCATGAACGGCTACAAGCACAAAGCCGATAGGAAGGTCATGGGGTCCCTGTTCATGGAGCCCAACTTTCTGGAGGCCCCACGTTCTGTGGACTGGAGGGACAACGGTTACGTTACTCCCGTAAAGGACCAGGGTCACTGTGGCTCTTGCTGGGCTTTCAGCGCCACTGGCGCTCTGGAGGGTCAGGTCTTCAGGAAGACTGGCAAACTGGTGTCTCTGAGCGAGCAGAACCTGGTGGAGTGCTCCAGACCCGAGGGCAATGAGGGCTGCAACGGCGGTCTGATGGACCAGGCCTTCCAGTACGTCAAGGACAACCAGGGCCTGGACTCTGAGGAGTCCTACCCATACCTGGCAACGGACGACAAGCCATGTCACTACGACCCCATGTACAACTCTGCTAACGACACCGGGTTCGTCGACATACCCAGCGGTAAGGAGCACGCTCTGATGAAGGCCGTAGCTTCCGTGGGACCCGTTTCAGTCGCCATCGACGCCGGCCACGAGTCTTTCCAGTTTTACCAATCAGgAATCTACTACGAGAAGGACTGCAGCAGCGAGGAGCTGGACCACGGCGTGCTGGCCGTGGGTTATGGCTTCGAGGGAGAAGATGTGGATGGCAAGAAATACTGGATCGTGAAGAACAGCTGGAGTGACAAATGGGGAGACAAAGGCTACATCTACATGGCTAGAGATAGAAAGAACCACTGTGGAATTGCAACAGCAGCCAGTTATCCTCTCGTTTAACGTTTGCACAGCTCCACTTTCTAGCTCCATAGTGTGCTTTTTTTTGCAATAGCTTGGCTGACAGCAACTGACGAGGCTTCGGTCAGGAAGACATCAGCAGGAGATTGTGATGTTTTATGGAGAAACACTGTTTTTAGGCAAATGGCGCCATTTTGTGTTTGGCTGGTTTTATGCcactttgtttttctaaaaacatttttagtctggtgttttctttgtaaatatGTAATGCTACTTCGGTAAGTGATACATTAACACTTTGatcattgtaaatgt

Function

NR:

description
procathepsin L precursor

GO: NA

KEGG:

id description
K01365 CTSL; cathepsin L

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039804358.1 True 1437 mRNA 0.52 8 31670525 31675115

Neighbor

gene id symbol gene type direction distance location
dapk1 dapk1 coding upstream 10258 31570042 ~ 31660267 (+)
LOC120560726 LOC103353430,LOC108242814,LOC103397877 coding upstream 105362 31513308 ~ 31565163 (+)
LOC120560109 NA coding upstream 180999 31485063 ~ 31489526 (+)
LOC120561065 NA coding upstream 209081 31456500 ~ 31461444 (+)
LOC120560681 LOC108242800,LOC106510782,LOC101474983 coding upstream 354103 31315299 ~ 31316422 (+)
kank1a kank1 coding downstream 24411 31699526 ~ 31757504 (+)
dmrt1 NA coding downstream 95177 31770292 ~ 31802453 (+)
dmrt2a dmrt2 coding downstream 145554 31820669 ~ 31825718 (+)
smarca2 smarca2 coding downstream 231007 31906122 ~ 31966734 (+)
rufy3 rufy3 coding downstream 729272 32404387 ~ 32426382 (+)
G66117 NA non-coding upstream 160169 31461798 ~ 31510356 (+)
LOC120560111 LOC108434293 non-coding upstream 185524 31478501 ~ 31485001 (+)
G66107 NA non-coding upstream 252265 31409955 ~ 31418260 (+)
G66092 LOC103362337,LOC101472255,LOC102204493,LOC102311726,LOC100707713 non-coding upstream 261369 31351198 ~ 31409156 (+)
G66069 NA non-coding upstream 352051 31317576 ~ 31318474 (+)
LOC120561307 NA non-coding downstream 84073 31759188 ~ 31763773 (+)
G66253 NA non-coding downstream 573886 32249001 ~ 32249240 (+)
G66255 NA non-coding downstream 615657 32290772 ~ 32291019 (+)
G66294 NA non-coding downstream 796070 32471185 ~ 32474048 (+)
G66295 NA non-coding downstream 799372 32474487 ~ 32475080 (+)
LOC120561064 NA other upstream 777245 30857580 ~ 30893280 (+)
G65899 taok3 other upstream 1092366 30574086 ~ 30578159 (+)
LOC120560820 NA other upstream 1419006 30246887 ~ 30251519 (+)
fbxo21 fbxo21 other upstream 1458417 30186848 ~ 30212108 (+)
ubac1 ubac1 other upstream 2318769 29344580 ~ 29351756 (+)
dmrt3a dmrt3 other downstream 132680 31807795 ~ 31811553 (+)
adamts3 adamts3,LOC100699019,LOC101479253,LOC102313231 other downstream 357461 32032576 ~ 32209534 (+)
G66231 NA other downstream 451178 32126293 ~ 32136966 (+)
G66256 slc4a5,LOC102211952,LOC101484802 other downstream 647392 32322507 ~ 32329990 (+)
G66263 LOC106536102 other downstream 689745 32364860 ~ 32369984 (+)

Expression


Co-expression Network