LOC120560432


Basic Information

Item Value
gene id LOC120560432
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 21672207 ~ 21679064 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039802946.1
AGTGCAACCACTTTTGAGAATTTGTGATAACATTTGTAACCctgtgaaaatgttttaatgtgtaaggacattttaaaaagttaaatcCGACGCATGGTCTTGGAAATATTATTACTGGTTTTGTGGTGTAGCCTAATAGGTGTACTATAGGCCTACTATCTTTAAATTAACTCAAATTACATATAttgaattaaatgatttaatcagACCGCTCGCAGTGGCCCCCATGTAAGGAATTGTACATTATAAATTGTAGGCTACCACAGATAATATAAAGGTGTAGGATTTGTATCTACACCACCTGCGCAGTCCGGTCAGAGCTGGCACTCGTTCACACAACTTCCTGCCGAGTCATCGGGACAGACGCGCAGCTCCGCCCCGGGACTCTGGCCTCCTCCAGCTCCGCTCGTCCTCATTGGCAACAGCGCAGACAGGACGGAGATGTCCGCTGCGGGGAAAGGTGAACCGACAGCACCGGGTGATTGTCAAAGGTCTGAAACGATCCACGTCGCCGTGAAAAGTCTCACAGAGAGCAAAGACTTCACCGTTAGGGAAGGCTGCACCGTCAGACAGctgaaATGGGGTGTAGCAGAGCGCCTGGGAGTCCCGGCAGAGCAGCTGGTGCTGAGCCACTCCGGCCGGGTGCTCGAAGGGTCAGAACTCCTGAGTCATCTTAAAGAACAAGATGAGTCAGTCTGTCTCTGCATGATCCAAAGGTCTCAGCATTTATCTGCTGCGACCACCTGTGATCCAGGTTCAGAAATGGTCCAGTCGGAGCTCACAGCCCTTCTCGATCCTGACCCTGATAGCTTCACACCGTCTCCCACCTCTCCCCTTTGTCTGGTGGAAGGTCTGGACAGTCTTGGCCTAACAAATAGTGGGCCTGGCTTCTTTCCTGCACTCCAGCGTCCGATGGAGAGCCAGCTTCTGGCTGACCCGGAGATGATGTGCCGTGTCCTGGGCAGCCCCTTCGTGCAGAGCACCCTCTCTACCTACAGCCCTCAACTAACGAGACAGCTCATTCTATCTAACCCCCAAATTCAGCAGCTCCTGCAGACAAACCCAGAGGTGGGGGATATCCTTAACCACACAGTTCTTATCACACAGGTGACGGAGCGTGTCAGGAACCCTGACATGATAGGGGAAGTGATGCATGATGAAGACAGAGCATTAGTCAATTTGCAGCCAGAGCAGGAAAACCCTGAAAGCATCACTGGTGATTCTGATGGGTTTCAGAAAAATGTCCAGATCCAGACAGGAGCACCTCCAGTGGTGACTACATCATCTGGGACTCAACAGCCAACTGAAAGAGAAAGCAACGAGACTCCACAGGTCTCCAGTCCCTCCACGGATCCTCTCAGAGAATGGACCGCCACGGCCAGAGTTGACCCAAACCCTCAGAGCACTGTTACTGCAGGCATGCAGTCACTGCTAGAGGAGGTCATGGCCAGTCCAGGACTGATGGAGAGCCTGCTCTCTGGCCCTTATGTCAGCAGTCTCCTCAATTGCCTCGGTCAGAACCCTGACCTGGCTGCACAGATGCTGCTGAGTCACCCTTTGTTCTCAGGATAtcctcagctgcagcagcagatgaGACAGCAGATCCCTCTCTTCCTGCAACAGATGCAGAGTCCAGAGCTGCTGTCAGCCATGTTGAACCCCAGAGCCATGGAGGCTCTGCTGCACATCCAACACGGCCTACAGACTCTGGCTGCAGAGGTTCCTGCAGTGATACCTACAGCCAGTGTTAATGCTGCCCCGGAGCTAGCATCTGACTCTTTCCTTAACAGCCAATCAGGAAGTGGTCCTCGTGTTGCCACAGTgacagaggagcagcagcaccAGTTTGTACAACAGATGCTACAGGCGCTGGCTAACGCCAATCATGGGGTCCATGTTGAGGAGGCTGAGTTCCAGGACGAGCTGGAGCATCTGAGCTCAATGGGCTTCGGAGACCGAGAGGCAAACCGTCAGGTTCTCATCAGGACTGGAGGAGACCTCACTACTGCTATACAACATCTGCTCAGTctctgacacatacacacacacacacacagatgttgtTCTGtccacatatacatacataagtGGATGCACATATACCTATTAAATAGAAGCACCCAATACACTAAAACATAATAATATCATTATCAGCaattacaaagtgctttacaaaaaacaaacataggAGACATGCAAGCCATATTCATATTTCTGTACTTTCAGAGACATTAATTCCTTAGCTCTCCTTAATAACCTCCGTCTGCAGTAAGAAATTATATTCAGTCCTagcttagtctatatccacgacgttccacttccgggattgctccgttgctgccggaaattccaccggatgtcactcttttcggccggatgtcagtttcctt
>XM_039802947.1
AGTGCAACCACTTTTGAGAATTTGTGATAACATTTGTAACCctgtgaaaatgttttaatgtgtaaggacattttaaaaagttaaatcCGACGCATGGTCTTGGAAATATTATTACTGGTTTTGTGGTGTAGCCTAATAGGTGTACTATAGGCCTACTATCTTTAAATTAACTCAAATTACATATAttgaattaaatgatttaatcagACCGCTCGCAGTGGCCCCCATGTAAGGAATTGTACATTATAAATTGTAGGCTACCACAGATAATATAAAGGTGTAGGATTTGTATCTACACCACCTGCGCAGTCCGGTCAGAGCTGGCACTCGTTCACACAACTTCCTGCCGAGTCATCGGGACAGACGCGCAGCTCCGCCCCGGGACTCTGGCCTCCTCCAGCTCCGCTCGTCCTCATTGGCAACAGCGCAGACAGGACGGAGATGTCCGCTGCGGGGAAAGGTGAACCGACAGCACCGGGTGATTGTCAAAGGTCTGAAACGATCCACGTCGCCGTGAAAAGTCTCACAGAGAGCAAAGACTTCACCGTTAGGGAAGGCTGCACCGTCAGACAGctgaaATGGGGTGTAGCAGAGCGCCTGGGAGTCCCGGCAGAGCAGCTGGTGCTGAGCCACTCCGGCCGGGTGCTCGAAGGGTCAGAACTCCTGAGTCATCTTAAAGAACAAGATGAGTCAGTCTGTCTCTGCATGATCCAAAGGTCTCAGCATTTATCTGCTGCGACCACCTGTGATCCAGGTTCAGAAATGGTCCAGTCGGAGCTCACAGCCCTTCTCGATCCTGACCCTGATAGCTTCACACCGTCTCCCACCTCTCCCCTTTGTCTGGTGGAAGGTCTGGACAGTCTTGGCCTAACAAATAGTGGGCCTGGCTTCTTTCCTGCACTCCAGCGTCCGATGGAGAGCCAGCTTCTGGCTGACCCGGAGATGATGTGCCGTGTCCTGGGCAGCCCCTTCGTGCAGAGCACCCTCTCTACCTACAGCCCTCAACTAACGAGACAGCTCATTCTATCTAACCCCCAAATTCAGCAGCTCCTGCAGACAAACCCAGAGGTGACGGAGCGTGTCAGGAACCCTGACATGATAGGGGAAGTGATGCATGATGAAGACAGAGCATTAGTCAATTTGCAGCCAGAGCAGGAAAACCCTGAAAGCATCACTGGTGATTCTGATGGGTTTCAGAAAAATGTCCAGATCCAGACAGGAGCACCTCCAGTGGTGACTACATCATCTGGGACTCAACAGCCAACTGAAAGAGAAAGCAACGAGACTCCACAGGTCTCCAGTCCCTCCACGGATCCTCTCAGAGAATGGACCGCCACGGCCAGAGTTGACCCAAACCCTCAGAGCACTGTTACTGCAGGCATGCAGTCACTGCTAGAGGAGGTCATGGCCAGTCCAGGACTGATGGAGAGCCTGCTCTCTGGCCCTTATGTCAGCAGTCTCCTCAATTGCCTCGGTCAGAACCCTGACCTGGCTGCACAGATGCTGCTGAGTCACCCTTTGTTCTCAGGATAtcctcagctgcagcagcagatgaGACAGCAGATCCCTCTCTTCCTGCAACAGATGCAGAGTCCAGAGCTGCTGTCAGCCATGTTGAACCCCAGAGCCATGGAGGCTCTGCTGCACATCCAACACGGCCTACAGACTCTGGCTGCAGAGGTTCCTGCAGTGATACCTACAGCCAGTGTTAATGCTGCCCCGGAGCTAGCATCTGACTCTTTCCTTAACAGCCAATCAGGAAGTGGTCCTCGTGTTGCCACAGTgacagaggagcagcagcaccAGTTTGTACAACAGATGCTACAGGCGCTGGCTAACGCCAATCATGGGGTCCATGTTGAGGAGGCTGAGTTCCAGGACGAGCTGGAGCATCTGAGCTCAATGGGCTTCGGAGACCGAGAGGCAAACCGTCAGGTTCTCATCAGGACTGGAGGAGACCTCACTACTGCTATACAACATCTGCTCAGTctctgacacatacacacacacacacacagatgttgtTCTGtccacatatacatacataagtGGATGCACATATACCTATTAAATAGAAGCACCCAATACACTAAAACATAATAATATCATTATCAGCaattacaaagtgctttacaaaaaacaaacataggAGACATGCAAGCCATATTCATATTTCTGTACTTTCAGAGACATTAATTCCTTAGCTCTCCTTAATAACCTCCGTCTGCAGTAAGAAATTATATTCAGTCCTagcttagtctatatccacgacgttccacttccgggattgctccgttgctgccggaaattccaccggatgtcactcttttcggccggatgtcagtttcctt
>XM_039802948.1
AGTGCAACCACTTTTGAGAATTTGTGATAACATTTGTAACCctgtgaaaatgttttaatgtgtaaggacattttaaaaagttaaatcCGACGCATGGTCTTGGAAATATTATTACTGGTTTTGTGGTGTAGCCTAATAGGTGTACTATAGGCCTACTATCTTTAAATTAACTCAAATTACATATAttgaattaaatgatttaatcagACCGCTCGCAGTGGCCCCCATGTAAGGAATTGTACATTATAAATTGTAGGCTACCACAGATAATATAAAGGTGTAGGATTTGTATCTACACCACCTGCGCAGTCCGGTCAGAGCTGGCACTCGTTCACACAACTTCCTGCCGAGTCATCGGGACAGACGCGCAGCTCCGCCCCGGGACTCTGGCCTCCTCCAGCTCCGCTCGTCCTCATTGGCAACAGCGCAGACAGGACGGAGATGTCCGCTGCGGGGAAAGGTGAACCGACAGCACCGGGTGATTGTCAAAGGTCTGAAACGATCCACGTCGCCGTGAAAAGTCTCACAGAGAGCAAAGACTTCACCGTTAGGGAAGGCTGCACCGTCAGACAGctgaaATGGGGTGTAGCAGAGCGCCTGGGAGTCCCGGCAGAGCAGCTGGTGCTGAGCCACTCCGGCCGGGTGCTCGAAGGGTCAGAACTCCTGAGTCATCTTAAAGAACAAGATGAGTCAGTCTGTCTCTGCATGATCCAAAGGTCTCAGCATTTATCTGCTGCGACCACCTGTGATCCAGGTTCAGAAATGGTCCAGTCGGAGCTCACAGCCCTTCTCGATCCTGACCCTGATAGCTTCACACCGTCTCCCACCTCTCCCCTTTGTCTGGTGGAAGGTCTGGACAGTCTTGGCCTAACAAATAGTGGGCCTGGCTTCTTTCCTGCACTCCAGCGTCCGATGGAGAGCCAGCTTCTGGCTGACCCGGAGATGATGTGCCGTGTCCTGGGCAGCCCCTTCGTGCAGAGCACCCTCTCTACCTACAGCCCTCAACTAACGAGACAGCTCATTCTATCTAACCCCCAAATTCAGCAGCTCCTGCAGACAAACCCAGAGGTGGGGGATATCCTTAACCACACAGTTCTTATCACACAGGTGACGGAGCGTGTCAGGAACCCTGACATGATAGGGGAAGTGATGCATGATGAAGACAGAGCATTAGTCAATTTGCAGCCAGAGCAGGAAAACCCTGAAAGCATCACTGGTGATTCTGATGGGTTTCAGAAAAATGTCCAGATCCAGACAGGAGCACCTCCAGTGGTGACTACATCATCTGGGACTCAACAGCCAACTGAAAGAGAAAGCAACGAGACTCCACAGGTCTCCAGTCCCTCCACGGATCCTCTCAGAGAATGGACCGCCACGGCCAGAGTTGACCCAAACCCTCAGAGCACTGTTACTGCAGGCATGCAGTCACTGCTAGAGGAGGTCATGGCCAGTCCAGGACTGATGGAGAGCCTGCTCTCTGGCCCTTATGTCAGCAGTCTCCTCAATTGCCTCGGTCAGAACCCTGACCTGGCTGCACAGATGCTGCTGAGTCACCCTTTGTTCTCAGGATAtcctcagctgcagcagcagatgaGACAGCAGATCCCTCTCTTCCTGCAACAGATGCAGAGTCCAGAGCTGCTGTCAGCCATGTTGAACCCCAGAGCCATGGAGGCTCTGCTGCACATCCAACACGGCCTACAGACTCTGGCTGCAGAGGTTCCTGCAGTGATACCTACCCAATCAGGAAGTGGTCCTCGTGTTGCCACAGTgacagaggagcagcagcaccAGTTTGTACAACAGATGCTACAGGCGCTGGCTAACGCCAATCATGGGGTCCATGTTGAGGAGGCTGAGTTCCAGGACGAGCTGGAGCATCTGAGCTCAATGGGCTTCGGAGACCGAGAGGCAAACCGTCAGGTTCTCATCAGGACTGGAGGAGACCTCACTACTGCTATACAACATCTGCTCAGTctctgacacatacacacacacacacacagatgttgtTCTGtccacatatacatacataagtGGATGCACATATACCTATTAAATAGAAGCACCCAATACACTAAAACATAATAATATCATTATCAGCaattacaaagtgctttacaaaaaacaaacataggAGACATGCAAGCCATATTCATATTTCTGTACTTTCAGAGACATTAATTCCTTAGCTCTCCTTAATAACCTCCGTCTGCAGTAAGAAATTATATTCAGTCCTagcttagtctatatccacgacgttccacttccgggattgctccgttgctgccggaaattccaccggatgtcactcttttcggccggatgtcagtttcctt
>XM_039802949.1
AGTGCAACCACTTTTGAGAATTTGTGATAACATTTGTAACCctgtgaaaatgttttaatgtgtaaggacattttaaaaagttaaatcCGACGCATGGTCTTGGAAATATTATTACTGGTTTTGTGGTGTAGCCTAATAGGTGTACTATAGGCCTACTATCTTTAAATTAACTCAAATTACATATAttgaattaaatgatttaatcagACCGCTCGCAGTGGCCCCCATGTAAGGAATTGTACATTATAAATTGTAGGCTACCACAGATAATATAAAGGTGTAGGATTTGTATCTACACCACCTGCGCAGTCCGGTCAGAGCTGGCACTCGTTCACACAACTTCCTGCCGAGTCATCGGGACAGACGCGCAGCTCCGCCCCGGGACTCTGGCCTCCTCCAGCTCCGCTCGTCCTCATTGGCAACAGCGCAGACAGGACGGAGATGTCCGCTGCGGGGAAAGGTGAACCGACAGCACCGGGTGATTGTCAAAGGTCTGAAACGATCCACGTCGCCGTGAAAAGTCTCACAGAGAGCAAAGACTTCACCGTTAGGGAAGGCTGCACCGTCAGACAGctgaaATGGGGTGTAGCAGAGCGCCTGGGAGTCCCGGCAGAGCAGCTGGTGCTGAGCCACTCCGGCCGGGTGCTCGAAGGGTCAGAACTCCTGAGTCATCTTAAAGAACAAGATGAGTCAGTCTGTCTCTGCATGATCCAAAGGTCTCAGCATTTATCTGCTGCGACCACCTGTGATCCAGGTTCAGAAATGGTCCAGTCGGAGCTCACAGCCCTTCTCGATCCTGACCCTGATAGCTTCACACCGTCTCCCACCTCTCCCCTTTGTCTGGTGGAAGGTCTGGACAGTCTTGGCCTAACAAATAGTGGGCCTGGCTTCTTTCCTGCACTCCAGCGTCCGATGGAGAGCCAGCTTCTGGCTGACCCGGAGATGATGTGCCGTGTCCTGGGCAGCCCCTTCGTGCAGAGCACCCTCTCTACCTACAGCCCTCAACTAACGAGACAGCTCATTCTATCTAACCCCCAAATTCAGCAGCTCCTGCAGACAAACCCAGAGGTGGGGGATATCCTTAACCACACAGTTCTTATCACACAGGTGACGGAGCGTGTCAGGAACCCTGACATGATAGGGGAAGTGATGCATGATGAAGACAGAGCATTAGTCAATTTGCAGCCAGAGCAGGAAAACCCTGAAAGCATCACTGGTGATTCTGATGGGTTTCAGAAAAATGTCCAGATCCAGACAGGAGCACCTCCAGTGGTGACTACATCATCTGGGACTCAACAGCCAACTGAAAGAGAAAGCAACGAGACTCCACAGGTCTCCAGTCCCTCCACGGATCCTCTCAGAGAATGGACCGCCACGGCCAGAGTTGACCCAAACCCTCAGAGCACTGTTACTGCAGGCATGCAGTCACTGCTAGAGGAGGTCATGGCCAGTCCAGGACTGATGGAGAGCCTGCTCTCTGGCCCTTATGTCAGCAGTCTCCTCAATTGCCTCGGTCAGAACCCTGACCTGGCTGCACAGATGCTGCTGAGTCACCCTTTGTTCTCAGGATAtcctcagctgcagcagcagatgaGACAGCAGATCCCTCTCTTCCTGCAACAGATGCAGAGTCCAGAGCTGCTGTCAGCCATGTTGAACCCCAGAGCCATGGAGGCTCTGCTGCACATCCAACACGGCCTACAGACTCTGGCTGCAGAGGTTCCTGCAGTGATACCTACGTCCATGTTGAGGAGGCTGAGTTCCAGGACGAGCTGGAGCATCTGAGCTCAATGGGCTTCGGAGACCGAGAGGCAAACCGTCAGGTTCTCATCAGGACTGGAGGAGACCTCACTACTGCTATACAACATCTGCTCAGTctctgacacatacacacacacacacacagatgttgtTCTGtccacatatacatacataagtGGATGCACATATACCTATTAAATAGAAGCACCCAATACACTAAAACATAATAATATCATTATCAGCaattacaaagtgctttacaaaaaacaaacataggAGACATGCAAGCCATATTCATATTTCTGTACTTTCAGAGACATTAATTCCTTAGCTCTCCTTAATAACCTCCGTCTGCAGTAAGAAATTATATTCAGTCCTagcttagtctatatccacgacgttccacttccgggattgctccgttgctgccggaaattccaccggatgtcactcttttcggccggatgtcagtttcctt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039802946.1 True 2390 mRNA 0.50 11 21672207 21679064
XM_039802947.1 False 2351 mRNA 0.50 11 21672207 21679064
XM_039802948.1 False 2339 mRNA 0.50 11 21672207 21679064
XM_039802949.1 False 2239 mRNA 0.50 10 21672207 21679064

Neighbor

gene id symbol gene type direction distance location
gkap1 gkap1,LOC102779162 coding upstream 116 21661703 ~ 21672091 (+)
LOC120561417 kif27 coding upstream 11464 21650457 ~ 21660743 (+)
c6h9orf64 LOC103366756,LOC102204152,LOC102298164 coding upstream 22631 21642897 ~ 21649576 (+)
hnrnpk hnrnpk coding upstream 30671 21627012 ~ 21641536 (+)
agtpbp1 agtpbp1 coding upstream 213860 21428343 ~ 21458347 (+)
frmd3 frmd3 coding downstream 13086 21692150 ~ 21751584 (+)
LOC120560723 NA coding downstream 72824 21751888 ~ 21762175 (+)
rasef rasef coding downstream 86562 21765626 ~ 21783917 (+)
LOC120560549 smad4,LOC104933118,LOC101068039,LOC101168872 coding downstream 201066 21880130 ~ 21892139 (+)
tmed7 LOC104949726,LOC102200599,LOC100701005,LOC101484666 coding downstream 224148 21903212 ~ 21906827 (+)
LOC120560273 NA non-coding upstream 51496 21608823 ~ 21620711 (+)
G63641 rmi1,LOC102777824,LOC104967280 non-coding upstream 53605 21616223 ~ 21618602 (+)
G63628 NA non-coding upstream 185169 21486769 ~ 21487038 (+)
G63627 NA non-coding upstream 187541 21479780 ~ 21484666 (+)
G63576 NA non-coding upstream 324690 21346367 ~ 21347517 (+)
G63714 NA non-coding downstream 165768 21844832 ~ 21845138 (+)
G63715 NA non-coding downstream 196381 21875445 ~ 21875687 (+)
G63792 NA non-coding downstream 452820 22131884 ~ 22150124 (+)
G63872 NA non-coding downstream 1224971 22904035 ~ 22905966 (+)
G63914 NA non-coding downstream 1308117 22987181 ~ 22988040 (+)
LOC120560787 NA other upstream 72918 21588876 ~ 21599289 (+)
G63480 rbm19 other upstream 994291 20676417 ~ 20677916 (+)
wdr31 wdr31,LOC102796061 other upstream 1181621 20473651 ~ 20490586 (+)
vps13a vps13a other upstream 1230114 20400947 ~ 20442093 (+)
c6h2orf68 c21h2orf68,c9h2orf68,LOC104941594,LOC103363183,LOC104920309 other upstream 1908683 19759596 ~ 19763524 (+)
G63905 NA other downstream 1250835 22929899 ~ 22930205 (+)
LOC120560905 clg12h9orf3,LOC103358904,LOC102294417,LOC101470200,LOC102214270 other downstream 1808903 23487967 ~ 23562285 (+)
G64108 NA other downstream 2013598 23692662 ~ 23693291 (+)
prxl2c aaed1 other downstream 3142250 24821314 ~ 24823066 (+)
cdc14b cdc14b,LOC102776968,LOC103141798,LOC106948523 other downstream 3144654 24823718 ~ 24837448 (+)

Expression


Co-expression Network