LOC120560529 (LOC104929280,LOC106096593,LOC106456402,LOC105940769,LOC105925442,LOC104963572,LOC105354747)


Basic Information

Item Value
gene id LOC120560529
gene name LOC104929280,LOC106096593,LOC106456402,LOC105940769,LOC105925442,LOC104963572,LOC105354747
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 17591945 ~ 17593975 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039803150.1
ATGGCGACGGCAAGAAAAGGGAGAGAGCTTTTTACTATTTTGGAAACTAGCGCGGACGCAGAAAGTAGCACGGTGTGCGACAGCCAAGACTCTCCGCTCAATCTTTCGGCCGATGTGAAGTGGTTTGAAATTCCTTACAGAAAGCCAGACTCGGACGAGGAAGACGAAGTGCGGGAGGAGGAGGACGGCGAGGGGGAGAATGGAATCACGGGCACGGCGGCGCCAGCCGCGGCGGAGACTGCAGACGCGGCCAGCTTCATCGCAGGAGGAGGCTGCAACATAATTCTAGTCACTGGCAGCAGTAATGGGATCAAGCACGACGAGGAGGAGTACGCGGAGGACTGTTATTATTCTACCTCCACTAACTGCTCTGATACCACCTCGAACGATTCGGATATTGATTTCTCCGatttggaggaggaggagcgcaGGAGTTTTTTCAGCTTCGAAGATGACTCGGACGAGGACTGCACTTCTCTCGACTTCTGGGGCGAACCTGATCAGGTCATATCAATCGAACCGTTCACCGCTGTCAGCGGCCCTCAGCACTCGCTGGGGGACGATGCTGACACCCGTGACTATTTCCGGATACTCTTCCCAGATTCTCTTTTTGAACACATGgtagaacaaacaaacaaatacgcCCTCTATCGGCAAAGGAGGAGTGGAAAATCAGACCCCCACTGGCACCCCACTGATGTCAGAGAAATGAAAGCTTATGTAGGTCTGAACATTCTTATGGGCATCAATCAGCTTCCAGACACTGGCATGTACTGGGCCAGTGACATTTTCATAGGCAATGCgggctttaaaaaaacaatgacagcCAGGCGCTTTGAAAAGCTCACCCAGTATCTCCAGCTGTGTGACCGTGACTCTGAGCCTGTGCGTGGAGAGCGGGGGTATGATGCCCTCTTCAAAATCAGGCCTGTCCTTGATGTGGTGGAGAACACCATGTGGGATGCATACACGCCCAATCGCTGCTTAACCATAGACAAGTGTGCCATTGTCATGAAGGGACGTTTCTCCCCCACCCAGTACATGCCCTCCAAGCCCCTGAGGAAAGGGCTGACCGTGTGGATGCTGTGTGACTCGCGCACTGGCTACTGCCACCGGGCCAAGATGTACGTAGGCAAGCCCGGTGAAGATGAAGCAACGGCCTCCCTGACCTACAGGGTGGTGACCTCCCTAGTGCGTGGCCTGGAGGGTCAGTACCACCACCTCTTCATGGACAGCTTCTTCACCTCAGTGCCCCTCCTCCAGCGGCTGCTGAAGGACGGACTGTACGCCTGCGGGCCCACCCAGCCGGGGCGCAAAGGTTACCCAGAGGTGCTGCGCCCCCGTAATGTCGGAAAGCTGTCACAGGGGGAGTTCTACCAGTGCCAGCGTGGCAATCTGGTTGCTACGGTGACACGGGATGTCAAGGTGGTTAGCTGCCTCTCCACCAACTGTGCTCCGGGGATTGTGGGTATCAGTCCAGGCCGGCAGCTGCATGAGACAGACGGGGAGGGCGAAAGCGACAGCATGAACTGCTCCGGTTTGTCGTACGGTGTACCCCGCCCTCTGCCCTTGCTGCTGTACCAGGAGAACATGAGGGGCGTCGACCTGTGCGACCAGCTGAGGGAGTGCTACCAGGTCGGCAGGCCGTGTAAGAAGTGGTGGCGCTTCTTCCTGTGGTTCTACGTCAATCTGTGCATCGTCAACGCTTACATCATCCTGAGGGAGAGCAGAGGGGGCACGCCACCGGCGGGCTTCAACGGCAAGCAGTTCACCCAGCGTCACTTCCGGGTGCGCCTGGCGCAGCAGCTGATTGGGGACTACCAGGGGGCAAGGGGCATGGAGCGGGCAGCACGCAAGAGACACGCAGATTCACCCATAGAGTACGGACACCGCCTGGAGCGCATGTCAGAGCGCTCTCGCCGCTGCAGGAACTGCACCAACAAGGGACTGCGACATGAAAGTGTGTTCGGCTGCAAGATATGCAATGTCCACCTATGCAGGGGAGGCTGCTTCTCTGAGTTTCATAAATAA

Function

NR:

description
PiggyBac transposable element-derived protein 4

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039803150.1 True 2031 mRNA 0.57 1 17591945 17593975

Neighbor

gene id symbol gene type direction distance location
LOC120561427 NA coding upstream 111388 17472263 ~ 17480557 (+)
ccnh ccnh coding upstream 566977 17018577 ~ 17024968 (+)
tmem161b tmem161b coding upstream 613550 16959457 ~ 16978395 (+)
mef2cb mef2c coding upstream 696757 16824815 ~ 16895188 (+)
si:dkey-40c11.2 LOC104955420,LOC104955419 coding upstream 928248 16628521 ~ 16663697 (+)
si:ch211-130m23.3 ssbp2 coding downstream 47568 17641543 ~ 17704206 (+)
LOC120560622 LOC103357060,LOC104963569 coding downstream 116215 17710190 ~ 17712781 (+)
LOC120560621 LOC102798399,LOC107393894 coding downstream 118945 17712920 ~ 17715065 (+)
f2rl2 f2rl2,LOC104963555 coding downstream 139593 17733568 ~ 17735949 (+)
poc5 LOC104956951 coding downstream 207470 17801445 ~ 17810258 (+)
LOC120560616 NA non-coding upstream 47037 17536842 ~ 17544908 (+)
G62217 NA non-coding upstream 75848 17515654 ~ 17516097 (+)
G62214 NA non-coding upstream 98746 17492892 ~ 17493199 (+)
G62213 NA non-coding upstream 99216 17492390 ~ 17492729 (+)
G62204 NA non-coding upstream 176596 17414652 ~ 17415349 (+)
G62280 NA non-coding downstream 163880 17757855 ~ 17758057 (+)
G62294 NA non-coding downstream 219614 17813589 ~ 17813813 (+)
G62344 NA non-coding downstream 345052 17939027 ~ 17940846 (+)
G62372 NA non-coding downstream 460824 18054799 ~ 18056149 (+)
G62406 NA non-coding downstream 533561 18127536 ~ 18127745 (+)
tmem167a tmem167a,LOC103397084 other upstream 19240 17568013 ~ 17572705 (+)
LOC120560947 edil3 other upstream 177350 17285648 ~ 17414595 (+)
LOC120560897 LOC105925468 other upstream 1057770 16532916 ~ 16534175 (+)
LOC120560890 NA other upstream 1116040 16468310 ~ 16475905 (+)
fam172a fam172a,LOC102785942 other upstream 1492461 15943698 ~ 16099484 (+)
cmya5 cmya5,LOC106958347,LOC104953151 other downstream 404711 17998686 ~ 18011030 (+)
thbs4a thbs4,LOC104953147,LOC106958346 other downstream 421430 18015405 ~ 18029386 (+)
setbp1 setbp1,LOC102781608 other downstream 480793 18074768 ~ 18129069 (+)
G62513 NA other downstream 736730 18330705 ~ 18331230 (+)
tbx5b tbx5,LOC103470367 other downstream 813373 18407348 ~ 18419590 (+)

Expression


Co-expression Network