tmem161b (tmem161b)


Basic Information

Item Value
gene id tmem161b
gene name tmem161b
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 16959457 ~ 16978395 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039803345.1
GCGTGACCTCTACTGCAGTTGAAAATACTTGGGAGCGGAGGTTGAATCCATTGATTTTTGACGATGTAACCCATCTCTCCAAGGATACGGTGACACTTTGAATGAGAAACCCCTTCATTGTGTGCATACCCATCGCAAGAAGGGCTTATGTGCTCCTCGCCGCTTGATTTCCGACTCGGGGTGCTCAGTGTTGTTGGGGTAGAGTCCGTTTCAGCTGCACTGCATCAACATGGGTGTGATCGGTGTGCAGCTGGTGGTTACCATGGTAATGGCCAGTGTAATTCAGAAAATCATACCTCATTATTCCTTCGCAAGATGGCTACTCTGCAGTGGCAGTCTGCGGTGGTATCAGCACCCTACGGAAGATGAGTTGAGGAGCTTAGCTGGGAAACAAAAAGGACAGAAGAAGAAAGACAGGAAGTACAATGGTCACATAGACAATAAGCCACTAACCGTTCCCAAGGACATAGACTTACAGCTGGAGACGAAATGCATCACAGAAGTCGACACATTAGCGTTGCACTACTTCCCAGAGTTCCAGTGGCTGGTGGATTTCACGGTAGCGGCAACTGTGGTCTATCTGATAACAGAACTCTACTACAGTGTGGCTCAGCCCTCGGGAGAGATGAACATCAGTGTGGTCTGGTGCCTGCTAGTACTCGCTTTTGTCATCAAGACCCTTTTCTCTCTAACCGCCCACTATTTCAAGCtggaggaaggaggggaacGTTCACTCTGCATtacttttgctttcttcttttttgtcaaAGCCATGGCCATTCTCATTGTCACTGAAAACTACCTGGAGTTCGGTCTGGAGACAGGTTTTGCAAACTTCTCTGACAGTGCTCTACAGTTTCTGGAGCACCAGGGCTTAGAGTCCCAGGGTCCCATATCTAAACTCACCTTCAAGCTGATCCTGGCCCTGCTCTGCTCCCTGATTGGAGCATTTCTAACTTTCCCCGGTCTACGATTGGCCCAGATGCACCTAGATGCACTCAATCTGACCACAGCCAAATTTACACAGACTCTGCTTCATGTCAACTTCCTCTCCCCTCTTATCATGGTCTTGTTGTGGGTGAAGCCCATTACCAAGGACTACCTAATGAACCCCACTCTGGAGAAGGAGAATGTGCCTTTGATGACTGAGGATACGTACGATACGCTGCGGTTATGGGCCATCATACTGATGTGTATACTCCGGCTCGCTATGATGAGACATCATTTGCAGGCCTACCTCAACCTGGCCCAGAAGGGTGTGGACCAGATGAAGAAGGAAGCGGGGCGGATAAGTACCGTTGACCTGCAGAAGATGGTTGCACGTGTTTTTTACTACTTGTGTGTAATCGCCCTACAGTATGTGGCACCACTGGTGATGCTGCTGCACACAACTTTGCTGCTAAAAACCTTAGGTGGACACTCCTGGTGGGTCTCTCCTGAAGAAGACCTGCCTTGCGTCTATGAAATGAACTCTGACTCTGTGATGGGGGCGGCACCATTAGCAGCCCCAACACCCGCTTCAGTGGTAGAAACAGGAGCCCGGGCGTCAGTAGCCCAGCTGTCAGTGGCCCTGGGAGGCCTGCGGACTGTCTTCAGCCCCTTGCTTTTCCGGGGCCTCTTCTCCTTCTTTACTTGGTGGATTGCTGCATGCCTCTTCTCCACCTCACTCTTTGGCCTCTTTTACCATCAGTATCTCATGGCAGCATAGCATCACCAACCCCACAGTGGCAGCCAGACTCCCACAGGGCTGCTGCGTGTTCGGTCTGATCAGAAAGGACTGACTGGGGGCAACGGAGGCATATTGATGACTCTGCTCCACGactcctccttccctccctctctccctccctcccttccttagACCAACTCGACAACGACTGACCATATCATCAGAGCTCCTGGTTCGACTTCCAGTGCTTCCTCCACAGATGAGTCTGTGAACTCTTGTCATTGTTTTTACTACAACGATCactaccttttttttaattttaaaaagcagGATTTATAAAGCTTAATAACAGACTAAAGAAGAATATTATTCAGTGTCTGTGGTGTATTGGCAGAGTAATGCTAAATTGGTCTAGTTTGCTGTGTGAAATTTGGCTGATATGAGTTAAAATAATGTACCTCAGATGCTGATTGCAATTCATTTTACGTGTTGAAATGTGGTGTGGCAGTTCCACCagtgttaagggaaagtttAATTAATGTTGTTGTTCatatttgtttttcacaactgATCTCTTGTAACGAGTTTGATCCATCAACATCTTCAGAACCATGATGTCTTTTAACTTTGGAAAGTCCTAAATGCAGCCTCCTATAGCTTCGTGCATGTACTGAAGTGTGCAGAGTCGATTTCAGTCCGTTATCCTCCTATTTAAatccttttattttcagtggTCACTGATGTTTCTTTAAGCTAGTATTGGCAAAGAATAACATCGCAGAGTTATCCAGGAACCACTACGGGAGGTATACTGCGTGACTTGGTGCAGTTTGGTTGGTACTAAGGCCTTGACGTTAGGAGTCATGCAACCATCTATATTCCAGTCTGTATCACAGTCCATGATGGGGCTAATTTTCCACAGTGATACATTGTAAAGAAGCTACATTTaggtgaaaaaacataattgaATCTGGAGATGTCCTTGGAGGCTAATATGTGATTAGCCCAAAATCACCTTTTATGTTTTCCTCGTGTTTTCGTACATTTTGGGGAAACAAATAACTGACATATTTGTGTCCCATGTGCGTCTTTTGATCATTTGTTTTTAAGCAAAATTGCTTTGTTTGTTTACTCACATGTCTATAATCCATTGCCACGGACCACAGAAGTGTCTAAAATAGTCTTAAAAAGTCTCTGTCtgtaggaggaggaagaggaggaggaggaggaggggggaggggcagCCTATTTCCAGAATGGCTGTCAGCTAAACGGGGTCTGAGGGTGGACAACTGAAGAAAAGCTGTACCTGAAGAGGAGATGTTAAACTCATGGGGAGACATCTCATTGACTTGAAGTTgatgtatgtaaatgtttattTGGCGTCGTGACCTCCCTGGTTTTAACTGAGCCATTTTAGAAGCTATGAGAGAATTTGAAGCTCTTTTTTTCTGAGCAGCAGAGATGATTTAAAGGGAGGACAGCACTGAGGGCTCAGTCAAGATAtgtgcttgtgtctgtgtgtctgtctgcatgtatAGGATCTCTGCTGTAGGTCAGCTGTAATCCGAAAGGGCATTGTGATCAAGAGGAGATGATGTCACCTACTGTTGATAAGCTACTGCCTTTTATGttctgctttctttcttttttacttttacccATCCATTGCTTTTTAACTCATCTGAGAACAAACATTTTGTTATAGTTTTTTCTAATGGATCAAATTGTGAATTTGTAAAAGTTTAAATTTTTAAAATGGTGCCAATTGAGTCTGTTTCCCTGTCCCAATGGCTATAGATTTGGTGTCTGCTAGTGTTTGGAACTATAACTGGACTACATCTCTGTGGCCTTCTTTTTTCTGTAATTCCATCTTCATAAGGAGGGAGTCCCAAGCCCTGGTTCACAACAAGACTTAAAGGAATGAACTGTCTTTGCATACTGTTATACTGCATACTCTTTGGTGGGTAAATGTATGCACAGTCATTGTGCTATACACCGGGCCAATATGATTGTCCAGTCCATTCAGGAATGTAGGGTACGTGGTGCCAGGTAGATTACAGAATACACAATCTTGTGTTTCTCTGgcgtttttatttcattattatattatagagCTGTACTTGGGGTACTACAAAATCAAACCGCATCATATCACATTTTTTAGCTCCTGATGTCGAAAGTCTTAGCTTcggttttgtctgtttttaaatgaTGGGGAATATGCACATAATGAATGTATCTATCCTGCCTAATTTCTAAATTGTTTTCATGAGAATGATTTGTATGGTGAGTTAATTTAACACCCCCTGCCCTTCCTGAACCCTTTACTTGTCTACTACCATCTGTAAAATGTACCTTTCAAACTAAATCTAATTTGTCCTAATGACTGTTTGTATTGATCAATTtatctttgtttttgtatttataaCACATGTCGAGGCCTGTAAGCATTTCTAATTTTAACAgcaaacactttattttgttattggAAAGTGTGATGGCTTAAATCAGTTTTGAAGACGTGTTTGACAAATCATTTACAGATTAACCTTTTTTAATGGTCTGGTCCGTTAAGAAGTAGCTGGGATACTTTCAGAATTCAGTGACCTGATGAGGCAATGTTTCTTCTTTGTTACCACTGAAAGTGTTTATTATTCATTGTTGAGTTCACAAAGTAAATCACATTGTtctttcatgtatttatttctgcTTTAGATTTTGTCTTAAATAAATTATGTTCTTTACtatg

Function

symbol description
tmem161b Predicted to be located in membrane. Predicted to be integral component of membrane. Is expressed in adaxial cell; head; mucus secreting cell; pronephric duct; and pronephros. Orthologous to human TMEM161B (transmembrane protein 161B).

NR:

description
PREDICTED: transmembrane protein 161B

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039803345.1 True 4421 mRNA 0.43 12 16959457 16978395

Neighbor

gene id symbol gene type direction distance location
mef2cb mef2c coding upstream 64269 16824815 ~ 16895188 (+)
si:dkey-40c11.2 LOC104955420,LOC104955419 coding upstream 295760 16628521 ~ 16663697 (+)
rhobtb4 LOC103362416,LOC103470451 coding upstream 343201 16572328 ~ 16616256 (+)
wdr54 wdr54 coding upstream 404945 16550250 ~ 16554512 (+)
LOC120560896 LOC103362386,LOC102790232,LOC102295658,LOC102208013 coding upstream 419272 16537126 ~ 16540185 (+)
ccnh ccnh coding downstream 40182 17018577 ~ 17024968 (+)
LOC120561427 NA coding downstream 493868 17472263 ~ 17480557 (+)
LOC120560529 LOC104929280,LOC106096593,LOC106456402,LOC105940769,LOC105925442,LOC104963572,LOC105354747 coding downstream 613550 17591945 ~ 17593975 (+)
si:ch211-130m23.3 ssbp2 coding downstream 663148 17641543 ~ 17704206 (+)
LOC120560622 LOC103357060,LOC104963569 coding downstream 731795 17710190 ~ 17712781 (+)
G62126 NA non-coding upstream 5820 16952925 ~ 16953637 (+)
LOC120560795 NA non-coding upstream 16281 16896588 ~ 16943176 (+)
G62085 NA non-coding upstream 339321 16610477 ~ 16620136 (+)
G62082 NA non-coding upstream 391743 16567482 ~ 16567714 (+)
G62033 aqp3,LOC103362379,LOC107393848,LOC105031174 non-coding upstream 445414 16512171 ~ 16514043 (+)
G62184 NA non-coding downstream 99508 17077903 ~ 17084516 (+)
G62186 NA non-coding downstream 112861 17091256 ~ 17091484 (+)
G62188 NA non-coding downstream 114974 17093369 ~ 17093740 (+)
G62193 NA non-coding downstream 145211 17123606 ~ 17124484 (+)
G62196 NA non-coding downstream 220994 17199389 ~ 17199599 (+)
LOC120560897 LOC105925468 other upstream 425282 16532916 ~ 16534175 (+)
LOC120560890 NA other upstream 483552 16468310 ~ 16475905 (+)
fam172a fam172a,LOC102785942 other upstream 859973 15943698 ~ 16099484 (+)
mctp1a mctp1,LOC102782783 other upstream 1182316 15636798 ~ 15777141 (+)
LOC120560526 NA other upstream 1426661 15518780 ~ 15532796 (+)
LOC120560947 edil3 other downstream 307253 17285648 ~ 17414595 (+)
tmem167a tmem167a,LOC103397084 other downstream 589618 17568013 ~ 17572705 (+)
cmya5 cmya5,LOC106958347,LOC104953151 other downstream 1020291 17998686 ~ 18011030 (+)
thbs4a thbs4,LOC104953147,LOC106958346 other downstream 1037010 18015405 ~ 18029386 (+)
setbp1 setbp1,LOC102781608 other downstream 1096373 18074768 ~ 18129069 (+)

Expression


Co-expression Network