stxbp1b (LOC103353854,LOC103141940,LOC100712335)


Basic Information

Item Value
gene id stxbp1b
gene name LOC103353854,LOC103141940,LOC100712335
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 11728462 ~ 11790629 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039803776.1
TGTTGCTTATTCTTATGAGCTTGACAGTAGTTGTCGCACCggttttagttttctttgcaCAGGTGGACGCGCGGTTCAGTGCTCATCATGGCACCACTTGGACTGAAAGCCATTGTTGGAGAAAAGATAATGAACAACGTCATCAAGAAGgcaagagaaaaaggaaaatggAAGGTGCTGGTGGTGGACAAGCTGAGCATGAGGATGATTTCCTCCTGCTGTAAGATGACAGACATCATGTCAGAGGGAATCACCATTGTAGAAGACATAGGCAAGCCGCGTGAGCCTCTGCCCAGCATGGAGGCCATCTACCTGATCACACCCTCAGATGAGTCTGTTGAGGGTCTGATTGATGACTTCAGAGACCCGAAGTCTCCAAGGTATCGAGGAGCTCACGTCTTCTTTACCGACACAATTCCAGACTTGTTGTTTGGACTGTTGACCAAATCCCGCGCCTCCAAAGCCATGAAGGCCTTGACTGAGATCCACATCGCCTTTCTGCCCTATGAATCTCAGGTCTTCTCCCTGGACAAGATGGATGCCTTTCAGGACTTCTACAGCCCATTCAAGGCTGACGTGAAGAACAACATGCTGGAGCGTTGTGCTGAGCAGATTGCCACCCTCTGTGCCACACTCAAAGAGTATCCTGGAGTCCGATACAGAGGGGAGTACAAAGACTGTGCAGTTCTGGCCCAGATGCTTCAGGAGAAGCTAGATGGCTACAAGGCTGATGACCCTACCATGGGAGAGGGTCCAGACAAGTCTCGTACTCAGCTGCTTATTCTGGATCGTGGCTTTGATCCTGTGTCACCTCTTCTGCATGAGCTCACACTGCAGGCAATGGCCTACGACCTGTTGGGAATTGAGAACGACGTCTACAGTTTTGAGACCAGTGGGATGGGAGAAACGAGAATGAAGGAGGTATTGCTGGATGAGGATGATGACCTGTGGCTGACtctgagacacaaacacatcgcAGAAGTGTCAACGGCTGTGACTCGTTCTCTTAAAGACTTCTCTGCCAGCAAAAAGATGAACACTGGAGAAAAGACCACCATGAAGGAACTGTCTCAGATGCTGAAGAAGATGCCTCAGTATCAGAAAGAGCTCAGCAAGTATTCAACCCATCTCCACTTGGCAGAAGACTGCATGAACCGCTACCAGGGGACTGTGGACAAACTCTGTCGTGTAGAGCAGgATCTGGCGATGGGCATAGATGCAGAGGGAGAGAAGATTAAGGATCCCATGAGGCTCATTGTACCCGTTCTACTAGATGCCACTGTCAGTGTGACTGACAAGATCCGCATTATCCTGCTCTACATCTTCCTTAAGAACGgTGTAACTGAGGAGAACCTGTGTAAGCTTCTTCAGCATGCCAGCATCCCACCAGAGGACAGTGACATAATTTCCAACATGGCCCACATGGGCATTCCCATTGTCTCTGAGGGCACCGCCAAGAAAGCCAAGAAGCCTGATCGTAAAGAGCGAATCAGTGAGCAGACCTACCAGCTCTCTAGGTGGACTCCTCTTGTGAAGGATCTTATTGAGGACGCCATCGAGGACAAACTTGACCCCAAGCAGTACCCGTACATTTCCCAGCGACAAGCATCTGCCAAAGCCAGCGCTCCCTCAAGTGCTCGCTATGGTAACTGGCACAAGAACAGGGGCCCCACAGAGATGAAGACGGGGCCAAGGATTATCGTCTTTATTATTGGAGGGATGACGTACAGCGAGATGCGCTGTGTGTATGAGGTCACCCAGGCCAATGGCAAGTGGGAGGCCCTGATTGGTTCCACCCACATTCTCACCCCACCTAAATACTTAAAGGAACTACAGCACCCAGACTTCCTGGACCCCAACGCCCCTCCAGAGGGGCCAGAGGAGCCGCCTGCAGAATAAAAGACATTTAATCAACTGAAATCTTCACCCCTACTCGCCTTCTAAAAGCCCTCAAAGACTTGTAGAAAGAAGAGCAGACCAGTTAAGAAGTTCCAGTGCTTTGCCTCAGCCCTCAGAAGTAACAAACTACGACTTCTCCTTCTGCTTTATCCCCTGGTATGACACATCAAATATaggctagatgttgtatatgaTTCAGTTGCTGTTTACTCATAAACCAAACTCTTTTAACGTTTTTGAGTGAATTGATATTGATCAAAGTTTATTGGACGAGATTGGATTTGTGTTGAATGTTGTCTACTGTATACTGTGGGACTTTTATTTCTTTGGAAAAGTAATGGATGTGAATTAGTTTAGATGATTGGATAAAATGCTTCAGTATGTGCTATAAATGAAAACTGGTTAAAGAGTATACTGGGACAATTATTTCTCTGCTTCACAGTTAGaacaaaattgtattttgcattgaaGACACACATTGAAGATATACAACCTTCTCATGACAGTTTCATTTCAAGTAGTGCTTTCCTTACAGTAGAAACCATGCCACTAAATCTAAACATTAGATTTTCAGTGATGTGTCTGACCTTGGAAATGCCTACGTAAAGCCACTCTGATGTTATATTCAGCTGTAGATCAAGCATTTTAAAGATAAATTATACAGTAGTTGGATTGTCTCTGTACACAGCAGTGTTTTTTGCagtgtattttatttctgttcCATGTGTTTGACCCTAATGTTGTCATTGGTTATTGTTGTGTAGTGATTCTCTGTAACTAGTAATCCACTGTGTATGAAGACAAATGTCAGTATTACAACAAGAATGTGATTGTATTTCCATGAACAATACTTGCTGCAGGATTTGTGTTAGCTAATAAAATGACTTTCATTAAACTcttta
>XM_039803777.1
aaaggaggaggaggagagagaccaTGACAGgaccatgggagcgagtgaggaaatgATGGAAGAAGAGAGTAgttgacgatgtgAGATAATGAACAACGTCATCAAGAAGgcaagagaaaaaggaaaatggAAGGTGCTGGTGGTGGACAAGCTGAGCATGAGGATGATTTCCTCCTGCTGTAAGATGACAGACATCATGTCAGAGGGAATCACCATTGTAGAAGACATAGGCAAGCCGCGTGAGCCTCTGCCCAGCATGGAGGCCATCTACCTGATCACACCCTCAGATGAGTCTGTTGAGGGTCTGATTGATGACTTCAGAGACCCGAAGTCTCCAAGGTATCGAGGAGCTCACGTCTTCTTTACCGACACAATTCCAGACTTGTTGTTTGGACTGTTGACCAAATCCCGCGCCTCCAAAGCCATGAAGGCCTTGACTGAGATCCACATCGCCTTTCTGCCCTATGAATCTCAGGTCTTCTCCCTGGACAAGATGGATGCCTTTCAGGACTTCTACAGCCCATTCAAGGCTGACGTGAAGAACAACATGCTGGAGCGTTGTGCTGAGCAGATTGCCACCCTCTGTGCCACACTCAAAGAGTATCCTGGAGTCCGATACAGAGGGGAGTACAAAGACTGTGCAGTTCTGGCCCAGATGCTTCAGGAGAAGCTAGATGGCTACAAGGCTGATGACCCTACCATGGGAGAGGGTCCAGACAAGTCTCGTACTCAGCTGCTTATTCTGGATCGTGGCTTTGATCCTGTGTCACCTCTTCTGCATGAGCTCACACTGCAGGCAATGGCCTACGACCTGTTGGGAATTGAGAACGACGTCTACAGTTTTGAGACCAGTGGGATGGGAGAAACGAGAATGAAGGAGGTATTGCTGGATGAGGATGATGACCTGTGGCTGACtctgagacacaaacacatcgcAGAAGTGTCAACGGCTGTGACTCGTTCTCTTAAAGACTTCTCTGCCAGCAAAAAGATGAACACTGGAGAAAAGACCACCATGAAGGAACTGTCTCAGATGCTGAAGAAGATGCCTCAGTATCAGAAAGAGCTCAGCAAGTATTCAACCCATCTCCACTTGGCAGAAGACTGCATGAACCGCTACCAGGGGACTGTGGACAAACTCTGTCGTGTAGAGCAGgATCTGGCGATGGGCATAGATGCAGAGGGAGAGAAGATTAAGGATCCCATGAGGCTCATTGTACCCGTTCTACTAGATGCCACTGTCAGTGTGACTGACAAGATCCGCATTATCCTGCTCTACATCTTCCTTAAGAACGgTGTAACTGAGGAGAACCTGTGTAAGCTTCTTCAGCATGCCAGCATCCCACCAGAGGACAGTGACATAATTTCCAACATGGCCCACATGGGCATTCCCATTGTCTCTGAGGGCACCGCCAAGAAAGCCAAGAAGCCTGATCGTAAAGAGCGAATCAGTGAGCAGACCTACCAGCTCTCTAGGTGGACTCCTCTTGTGAAGGATCTTATTGAGGACGCCATCGAGGACAAACTTGACCCCAAGCAGTACCCGTACATTTCCCAGCGACAAGCATCTGCCAAAGCCAGCGCTCCCTCAAGTGCTCGCTATGGTAACTGGCACAAGAACAGGGGCCCCACAGAGATGAAGACGGGGCCAAGGATTATCGTCTTTATTATTGGAGGGATGACGTACAGCGAGATGCGCTGTGTGTATGAGGTCACCCAGGCCAATGGCAAGTGGGAGGCCCTGATTGGTTCCACCCACATTCTCACCCCACCTAAATACTTAAAGGAACTACAGCACCCAGACTTCCTGGACCCCAACGCCCCTCCAGAGGGGCCAGAGGAGCCGCCTGCAGAATAAAAGACAT

Function

NR:

description
syntaxin-binding protein 1-like isoform X2

GO:

id name namespace
GO:0006904 vesicle docking involved in exocytosis biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039803776.1 True 2801 mRNA 0.46 20 11728462 11790629
XM_039803777.1 False 1865 mRNA 0.51 19 11730594 11788757

Neighbor

gene id symbol gene type direction distance location
LOC120561249 fut7,LOC103353858 coding upstream 152108 11573980 ~ 11576354 (+)
ankrd34bb NA coding upstream 450978 11275018 ~ 11277484 (+)
gtf2h2 LOC100696048,LOC102788170,LOC101466805,LOC102292669,LOC102204724 coding upstream 496575 11218951 ~ 11231887 (+)
oclnb LOC104926565,LOC103397562 coding upstream 522350 11193487 ~ 11206112 (+)
marveld2b LOC104926564,LOC103371582,LOC102788930,LOC102293847,LOC101466532 coding upstream 540251 11173019 ~ 11188211 (+)
LOC120561470 LOC107749966 coding downstream 47129 11837758 ~ 11848140 (+)
dpp7 dpp7 coding downstream 330796 12121425 ~ 12158698 (+)
LOC120561040 NA coding downstream 683452 12474081 ~ 12501550 (+)
LOC120561039 NA coding downstream 683544 12474173 ~ 12485766 (+)
fgf17 fgf17,LOC100689794 coding downstream 950237 12740866 ~ 12748536 (+)
G60822 NA non-coding upstream 124026 11603778 ~ 11604436 (+)
G60821 NA non-coding upstream 124851 11603180 ~ 11603611 (+)
G60780 NA non-coding upstream 183803 11488366 ~ 11544659 (+)
LOC120561253 NA non-coding upstream 199707 11528049 ~ 11528755 (+)
G60730 NA non-coding upstream 493882 11234347 ~ 11234580 (+)
G60864 NA non-coding downstream 5352 11795981 ~ 11796327 (+)
G60876 NA non-coding downstream 77996 11868625 ~ 11873116 (+)
LOC120560076 NA non-coding downstream 82863 11873492 ~ 11876959 (+)
LOC120560077 NA non-coding downstream 86344 11876973 ~ 11880769 (+)
G60891 NA non-coding downstream 107464 11898093 ~ 11898916 (+)
LOC120561144 NA other upstream 976022 10748116 ~ 10752440 (+)
LOC120561142 NA other upstream 981509 10726438 ~ 10746953 (+)
LOC120560959 golga7,LOC104937560,LOC106585131 other upstream 1747408 9926950 ~ 9981054 (+)
ppp3cca LOC104934810,LOC100705072,LOC105915415,LOC101486266,LOC102777092,LOC103366803,LOC102200614,LOC101072650,LOC106932221 other upstream 2672697 9017891 ~ 9055765 (+)
vps37ba vps37b,vps37c,LOC102776795 other upstream 2713559 8991441 ~ 9014903 (+)
G60897 NA other downstream 135554 11926183 ~ 11926601 (+)
G61139 tubb2b,tubb4b,LOC103024866,LOC101061694,LOC105901187 other downstream 1130518 12921147 ~ 12923836 (+)
LOC120560904 crb2,LOC103353841,LOC106959700,LOC106929552 other downstream 1341469 13132098 ~ 13180491 (+)
G61337 LOC100705941,LOC102292089,LOC108234925,LOC106529513,LOC104934772,LOC103365846 other downstream 2316854 14107483 ~ 14109546 (+)
G61338 htr7,LOC104934772,LOC101065316 other downstream 2350813 14141442 ~ 14142050 (+)

Expression


Co-expression Network