rfk (rfk,LOC102794611)


Basic Information

Item Value
gene id rfk
gene name rfk,LOC102794611
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 20305357 ~ 20308633 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039804551.1
CTACCGGTCCGCTTTGGTCACGCGGTCAATGACATCAGTAAAAGCTTTACTAAGGCAGATGTGTGTACTGTAACGTTACAACACATGTAATATAGTACCACCTGTGAGCACCAGGGCTTTATTATCACCGTGAGTGGACCTACCGGGACGGACCCAGCAAAAGCAGACAAGCAAAACAGGATAAACCGTTTTAAGGACAGGGTGCCTCTATTGAAGCTAACAACAGTAGTAAGCTTAGCTAGCATACCTGGTGAACTTTTACCATCGCTGCTCTGTGTTTGACAATCAACTTTATCCAACTCGAGCAAGCTAACCAGGCAGCTGAAGCTATATAACATTAGCTAAATGCAAGGACGGACTTTGAACTCTACAAGGGTAAGATTTCAGTTTTGCTAGCTAACTGTCAAAGAGTTTCTAGCTGATTAGCCAGTCCGACTTCCTTGTGTTCGAGGTCATTCTGTTTTCTAAGTGATTGTCGGGAAGCTAGTCATGAAGAGCCTACCGTATTTCTGCCGGGGAGAGGTCATTCGAGGCTTCGGGAGAGGAAGCAAAGAACTGGGAATCCCCACAGCCAACTTCCCTGATTCAGTGGTGGACAATCTTCCAGCAGATATTGGCACAGGAATCTACTATGGCTGGGCCTGTGTCGGTAATGGTGATGTCTACAAGATGGTGATGAGCATTGGCTGGAACCCTTACTACAAAAATACCAAGAAGTCCATGgAGACCCATGTGATTCACACATTTAAAGAAGACTTTTATGGGGAGATTCTCAGTGTTGTCTTGGTGGGCTACATCCGTCCAGAGAGAAGCTACAACTCACTTGAAGCGCTCATTGCAGCCATAAACAGCGACATTGAGGAGGCCAAGGTCACGCTGGAGCTCCCCGAGCATCTCAAACTGAGAGACGACAACTTCTTCACCAGCGCTCCCAGCTCATCGTCAGCCCTGCCCCCCAACACTGCATCCACATCACAGACTATTATAAATGGTCACTGACAGCTGGCTTTGACTGTAGCActttgtgtacacacacacacacacacacacacaccagaaaacATACGTTTCTATATACACACAGGTGTATACACTAATTAAAATGCACACCCTCATTCTGAGATCTCTGACCTGTTGTCATGGCTGCATAAACaaccaatcttttttttttttttttattgtatttttcttttacctccttaatgtgtctcaattgtttaaCTTCTTGAATGGTTTTTTTGCAGACTGCTTTTGTATATACTCACACCAGATTGCCTCATCTAATAGCGTAACTGTGTATCTCTTTGGTCTTACTGGTCCTGCTgtatatttggaatattttATGTAAGAAAGtaccatcaaaaaaaaaaaaatacagattttgGCATAATGGTGACCACAAGtaattttgtaataatttgtaTATAAAGAAAGACACAAATGGGCTGCAATTATTTATTCTAGTTTACACAGGGACCAGGGTTACTGCATGTAGAATTAAAGGTTCAACAATACATTTATGTCAGTTTTGTTATTTCCATATATTAGGGTAAGATGCAGTGGGAATACAATTTATTCTAAATTTGTAAAGCATAAAAAATAGgataaaatatttaaagttaTGCACATGGCTGGCCAAGAGCTCTTTTTGTGACATCACTGGCTGATAACTGCCTGAATGTTGTTATTGTCCTAATATCAGTGATATCAATGGTTTCTTATTATtatgtaattaaaataaaaaagatctcAGAACTTA

Function

symbol description
rfk Predicted to enable riboflavin kinase activity. Predicted to be involved in FMN biosynthetic process and riboflavin metabolic process. Predicted to act upstream of or within riboflavin biosynthetic process. Predicted to be active in mitochondrion. Orthologous to human RFK (riboflavin kinase).

NR:

description
riboflavin kinase

GO:

id name namespace
GO:0016310 phosphorylation biological_process
GO:0009231 riboflavin biosynthetic process biological_process
GO:0008531 riboflavin kinase activity molecular_function

KEGG:

id description
K00861 RFK, FMN1; riboflavin kinase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039804551.1 True 1759 mRNA 0.41 4 20305357 20308633

Neighbor

gene id symbol gene type direction distance location
LOC120561476 LOC103366654,LOC100696819,LOC105919079,LOC104952311 coding downstream 123244 20178184 ~ 20182113 (-)
gtf2h3 gtf2h3 coding downstream 128310 20171986 ~ 20177047 (-)
cfap251 NA coding downstream 145658 20152668 ~ 20159699 (-)
LOC120560702 mlxip coding downstream 153258 20134303 ~ 20152099 (-)
si:ch211-110p13.9 LOC104946526 coding downstream 228465 20074593 ~ 20076892 (-)
LOC120561015 prune2 coding upstream 19644 20328277 ~ 20348190 (-)
gna14a gna14,LOC104920279,LOC102298372 coding upstream 133637 20442270 ~ 20450508 (-)
LOC120560855 bri3bp coding upstream 183461 20492094 ~ 20497896 (-)
bmpr1ba bmpr1b,LOC102797736 coding upstream 748200 21056833 ~ 21139974 (-)
pdlim5a pdlim5 coding upstream 837442 21146075 ~ 21208072 (-)
G63334 NA non-coding downstream 98835 20205248 ~ 20206522 (-)
G63291 NA non-coding downstream 206559 20096950 ~ 20098798 (-)
G63297 NA non-coding downstream 222375 20081232 ~ 20082982 (-)
G63284 NA non-coding downstream 278689 20025912 ~ 20026668 (-)
G63283 NA non-coding downstream 279950 20024899 ~ 20025407 (-)
G63397 NA non-coding upstream 83783 20392416 ~ 20392627 (-)
G63450 NA non-coding upstream 249712 20558345 ~ 20558857 (-)
G63454 NA non-coding upstream 311430 20620063 ~ 20620339 (-)
G63456 NA non-coding upstream 325628 20634261 ~ 20634501 (-)
G63483 NA non-coding upstream 373965 20682598 ~ 20682883 (-)
G63345 NA other downstream 23146 20269120 ~ 20282211 (-)
LOC120561469 NA other downstream 180485 20109416 ~ 20124872 (-)
LOC120561342 NA other downstream 573784 19711448 ~ 19731573 (-)
LOC120560442 LOC104920315,LOC103374896,LOC100704901 other downstream 750449 19549451 ~ 19554908 (-)
si:ch211-225b11.1 LOC103353539,LOC101465611,LOC100705171 other downstream 1068271 19179505 ~ 19237086 (-)
LOC120560417 LOC104920278,LOC103361005,LOC106523804,LOC103398708,LOC101066291,LOC101475922 other upstream 142961 20451594 ~ 20477805 (-)
G63487 NA other upstream 383245 20691878 ~ 20692279 (-)
ntrk2a ntrk2 other upstream 1171153 21479786 ~ 21584276 (-)
rmi1 rmi1 other upstream 1307590 21616223 ~ 21627021 (-)
LOC120560435 idnk other upstream 1373343 21681976 ~ 21691550 (-)

Expression


Co-expression Network