LOC120561480


Basic Information

Item Value
gene id LOC120561480
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 31126860 ~ 31128760 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039804654.1
gtgaaacttaaaGTTCCACTTTGCTAAACGTAGCTGACACGCCTTTACAGGTGTGACGCTTCTgcggcaaaaacaaaaaacaaacacgttTGGAACATTTAAAAGAAGGGACATTAGGTTGGTGAGTCTTATAATCGACAACAAATGGCTGAGAAAGCTGCTCTCTTTGAAAGTTTCCTGAGTTGCCACGTGTGTTCAGAGACTTTCAGAGACCCTGTGTCTCTGAGCTGCAGTCACAGATTCTGTTCAAACTGCCTGCAAAAGTTCTGGGAACaagctaaaaacaaaaactgtcccatttgtaaaagaaaatcCTCAAGAGAAGACCTGGAAGTCGATGTTTCACTGAAGGAACTGGCTGACTCCTTTGCTGAGAGGCAGAATCATTGTGCAACTGAGacggaaaaagaaaaggagacaaagGAAGTTGTGTGTGTTAAACATCCAGAAGTCCCTTATTGGTTCTGTGAGGATGAAGATAGAGCTGTGTGTCCTGTCTGTGAGTTTTCTCTCCACCACGGTCACAAGGTGGTTCCTATAGAACTAGCAGTCAGTGAGCTGAAGGAGCAGCTGAAATCTGACTTGAAGTCTCTACAGGACAAGAGGGGCAGATACAAACAAGTGGAGAAAACATCCGATGAAGTGATTCAACACTCCAAGAAGCAGCTGTTGTCCACAGAGAGGCAGATCAGAGCAGAGTTCAACAAGCTTCACCAGTTcctgaaagaggaagaggagtccaGACTGGCAGctctgagggaggaagaggagcagaagggGAAGACTATCAGCAGAGAGATGAAGATGATTCAGGAGCAGATCTCCTCTCTGTCAGACAGTATCTCTGCTGTTGAAGAAGAGCTGCAGAAACACAACGTGCCGTTCCTCAGCAGTTATAAACCCACTCAGACCAGAGCCAGAGTCCAGTGCTCGCTGTCAGATCCACAGCTGGTCTCAGGAGCGCTGACAGATGTGGCCAAACATCTGGGCAACCTGTCCTTCAGAGTCTGGGAGAAGATGAGGGACGAGGTCCACTTCAGTCCTGTCattctggacccaaacactgcaGCCTGCAATCTCTATCTGTCAGATGATCTGACCAGTGTGAGACAGGGAGACACCAAGCAGCAGCTTCCTGACAATCCAGAGAGATGCACTTACTATGAAGATGTTCTGGGCTCTGAGGGGTTCAGCTCAGGGAAACACAGctgggaggtggaggtgggaaACCATCTTGACTGGGAGTTGGGTTTGGTTAAAGAGTCAGTTGAGAGGAAGGGAGAGTTACGTGCTACACCAACATATGGAATCTGGTGTTTAATGCATCGCAGCGGAAAATATTTTGATGTTATTGGTAAGAAGGTCAGAGTGAAGAAGAGTCTCCAGAGGATCAGAGTCCAGCTGGACTATGACCGGGGGGAGGTGTCCTTCTACAACCCTGAAGACAAGACCCACATCTGCACTCACAGAGACActttcactgagaaactcttcccATATTTTGGTATTGGTGTGGCCGGTGATGCTAAAACTGCTGATATCAGAATCTGTCCAACTGAGATTTCTCCGTGATGTTCAGGGAGGGTGCGGTGGTCTAGATTTTTGTAATGGTGGTGTTTTGTTCAGTTACAGACAATTCCAGTTAGCTCTTTTATAGGAGAAAATTGTGTAATTTGAAAGTAAATGAGGAAAGTAAAAGAAACAAGGTTTTCACTCCTTCAGCAAATTACATGATGGAATATTTCTAAAGGACAGAATGAGAAACTAAAGCTGAAATGTAGGCAGTTAGGTGTGTGCAGCATTCttagaaaaaaatcttttgggAGTATATTTTATGTGATTAATTTTagttaaatgaagaaaaaacggaggtggttgtttttggagcaaaagaggaacga

Function

GO:

id name namespace
GO:0005622 intracellular anatomical structure cellular_component
GO:0008270 zinc ion binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039804654.1 True 1901 mRNA 0.45 1 31126860 31128760

Neighbor

gene id symbol gene type direction distance location
LOC120561479 NA coding upstream 2186 31122558 ~ 31124674 (+)
si:dkey-174n20.1 LOC104959464,LOC104920648,LOC101478912,LOC102310039,LOC100693286 coding upstream 4949 31117825 ~ 31121911 (+)
znrf3 znrf3 coding upstream 119563 30928746 ~ 31007297 (+)
hspb8 hspb8 coding upstream 277379 30838226 ~ 30849481 (+)
srrm4 srrm4 coding upstream 291179 30769425 ~ 30835681 (+)
LOC120559964 NA coding downstream 108508 31237268 ~ 31241040 (+)
hs3st1l2 LOC102790965,LOC100694141,LOC103362344,LOC102206456,LOC102298111 coding downstream 145138 31273898 ~ 31300445 (+)
LOC120560681 LOC108242800,LOC106510782,LOC101474983 coding downstream 186539 31315299 ~ 31316422 (+)
LOC120561065 NA coding downstream 327740 31456500 ~ 31461444 (+)
LOC120560109 NA coding downstream 356303 31485063 ~ 31489526 (+)
G65958 xbp1 non-coding upstream 217390 30906356 ~ 30909470 (+)
G65951 NA non-coding upstream 289086 30754359 ~ 30837774 (+)
G65890 vsig10 non-coding upstream 586021 30539817 ~ 30540839 (+)
G65883 ksr2 non-coding upstream 695119 30431386 ~ 30431741 (+)
G65881 NA non-coding upstream 705414 30417513 ~ 30421446 (+)
G66015 NA non-coding downstream 1281 31130041 ~ 31154168 (+)
G66072 NA non-coding downstream 172750 31301510 ~ 31301746 (+)
G66071 NA non-coding downstream 182183 31310943 ~ 31311447 (+)
G66069 NA non-coding downstream 188816 31317576 ~ 31318474 (+)
G66092 LOC103362337,LOC101472255,LOC102204493,LOC102311726,LOC100707713 non-coding downstream 222438 31351198 ~ 31409156 (+)
LOC120561064 NA other upstream 233580 30857580 ~ 30893280 (+)
G65899 taok3 other upstream 548701 30574086 ~ 30578159 (+)
LOC120560820 NA other upstream 875341 30246887 ~ 30251519 (+)
fbxo21 fbxo21 other upstream 914752 30186848 ~ 30212108 (+)
ubac1 ubac1 other upstream 1775104 29344580 ~ 29351756 (+)
dmrt3a dmrt3 other downstream 679035 31807795 ~ 31811553 (+)
adamts3 adamts3,LOC100699019,LOC101479253,LOC102313231 other downstream 903816 32032576 ~ 32209534 (+)
G66231 NA other downstream 997533 32126293 ~ 32136966 (+)
G66256 slc4a5,LOC102211952,LOC101484802 other downstream 1193747 32322507 ~ 32329990 (+)
G66263 LOC106536102 other downstream 1236100 32364860 ~ 32369984 (+)

Expression


Co-expression Network