LOC120560123


Basic Information

Item Value
gene id LOC120560123
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 24514819 ~ 24518873 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005639429.1
GCGGTCTTGGCATCTGACAGCCTCAAAGATGTTGAAAAGATTTCAACTGAGGCAGAGGGTTACCAAGCGGTCTTGGCATCTGACAGCCTCAAAGATGTTGAAAAGAGGATCATCATGGTACCGTgataatctgacagctttaaagATGTTGAAAAGGTGACTTAATCTCTATTTAATTTTGATATTGACATCAGATCTTTTTGGTTGCAAAGCAGTTTTTACCAGATGTTGATATTTGAGTGAGGGTTATGGATACACAGTCCTCAGTGTACATGTACTGGTCAGTTGTAGACACTTTGAGGACAGTGTATTTGGACATTATCCCTCCATAGTAAGATTattgaaaaatgtatatatgctgttagtatttagtattattagtagtatCAGCATTTCTCTATAATATTAGTTCCACAAAAATTTAAGTGGAAAAAAATCACTTCAATTCTGTTtaaatcaatacttttaaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005639429.1 True 470 lncRNA 0.35 3 24514819 24518873

Neighbor

gene id symbol gene type direction distance location
gadd45ga gadd45g coding upstream 299730 24213241 ~ 24215089 (+)
creb3l3l LOC103366202,LOC104958765 coding upstream 304377 24203522 ~ 24210442 (+)
nim1ka nim1k coding upstream 311835 24181917 ~ 24202984 (+)
znf131 znf131,LOC102798529 coding upstream 333008 24174441 ~ 24181811 (+)
ghra LOC103366197 coding upstream 352349 24126863 ~ 24162470 (+)
znf367 znf367,LOC102779640 coding downstream 324833 24843706 ~ 24849355 (+)
smyd1b smyd1,LOC107394125,LOC100708974 coding downstream 376189 24895062 ~ 24901099 (+)
znf366 znf366 coding downstream 405656 24924529 ~ 24932594 (+)
mrps27 mrps27,LOC106943511 coding downstream 416787 24935660 ~ 24948527 (+)
ptger4a LOC103360740,LOC104967800 coding downstream 439289 24958162 ~ 24962478 (+)
G64251 NA non-coding upstream 151910 24362475 ~ 24362909 (+)
G64235 NA non-coding upstream 280331 24234274 ~ 24234488 (+)
G64200 NA non-coding upstream 345291 24164677 ~ 24169528 (+)
G64188 NA non-coding upstream 410467 24101506 ~ 24104352 (+)
G64183 NA non-coding upstream 456058 24049968 ~ 24058761 (+)
G64279 NA non-coding downstream 341376 24860249 ~ 24862730 (+)
G64287 NA non-coding downstream 357689 24876562 ~ 24892517 (+)
LOC120560056 NA non-coding downstream 515836 25034709 ~ 25040898 (+)
G64392 NA non-coding downstream 691051 25209924 ~ 25210170 (+)
G64450 NA non-coding downstream 740843 25259716 ~ 25302920 (+)
G64108 NA other upstream 821528 23692662 ~ 23693291 (+)
LOC120560905 clg12h9orf3,LOC103358904,LOC102294417,LOC101470200,LOC102214270 other upstream 952534 23487967 ~ 23562285 (+)
G63905 NA other upstream 1584614 22929899 ~ 22930205 (+)
LOC120560787 NA other upstream 2915530 21588876 ~ 21599289 (+)
G63480 rbm19 other upstream 3836903 20676417 ~ 20677916 (+)
prxl2c aaed1 other downstream 302441 24821314 ~ 24823066 (+)
cdc14b cdc14b,LOC102776968,LOC103141798,LOC106948523 other downstream 304845 24823718 ~ 24837448 (+)
LOC120561182 LOC104948667,LOC104930137,LOC103397628,LOC103366370,LOC107092578,LOC102226292,LOC106956829,LOC106919698,LOC103470079,LOC103141747 other downstream 1166091 25684964 ~ 25696576 (+)
LOC120560031 LOC104941040,LOC103357154,LOC102795853 other downstream 1395406 25914279 ~ 25915577 (+)
LOC120560359 NA other downstream 1407214 25926087 ~ 25928596 (+)

Expression


Co-expression Network