LOC113528651


Basic Information

Item Value
gene id LOC113528651
gene name NA
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047607.1
NCBI id CM018553.1
chromosome length 26458119
location 5090198 ~ 5090283 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XR_003402967.1
TGCAAATGATGTCTTTTCTCACGATGGTCTTCCAAGCCATTGGTGCTTTGACGACATTGCCTATACGGCTACACTGATGCAGTCCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_003402967.1 True 86 ncRNA 0.47 1 5090198 5090283

Neighbor

gene id symbol gene type direction distance location
map3k14a LOC108259239 coding upstream 11828 5057922 ~ 5078370 (+)
wnt9b wnt9b,LOC108259511,LOC107721476,LOC108427420,LOC107601233 coding upstream 98947 4982026 ~ 4991251 (+)
LOC113528572 NA coding upstream 115368 4970822 ~ 4974830 (+)
fmnl1a LOC108278868,LOC107654518,LOC107601298,LOC107721528,LOC108427416,LOC107720013 coding upstream 319702 4737041 ~ 4770496 (+)
ezh1 ezh1 coding upstream 540720 4527593 ~ 4549478 (+)
LOC113528648 NA coding downstream 237 5090520 ~ 5090604 (+)
LOC113528650 NA coding downstream 549 5090832 ~ 5090916 (+)
LOC113528649 NA coding downstream 965 5091248 ~ 5091332 (+)
hrob LOC108259294 coding downstream 6039 5096322 ~ 5103874 (+)
asic2 asic2,LOC108411330,LOC107654528,LOC107674665,LOC107720021,LOC107737939 coding downstream 18138 5108421 ~ 5626980 (+)
G205454 NA non-coding upstream 8994 5079987 ~ 5081204 (+)
G205436 NA non-coding upstream 92402 4894540 ~ 4997796 (+)
LOC117598842 NA non-coding upstream 164516 4923914 ~ 4925682 (+)
G205315 NA non-coding upstream 417169 4671760 ~ 4673029 (+)
G205306 NA non-coding upstream 526544 4563408 ~ 4563654 (+)
G206157 NA non-coding downstream 539175 5629458 ~ 5629659 (+)
G206212 NA non-coding downstream 645087 5735370 ~ 5735607 (+)
G206221 NA non-coding downstream 664569 5754852 ~ 5756939 (+)
LOC117599005 NA non-coding downstream 778579 5868862 ~ 5869806 (+)
G206289 NA non-coding downstream 828162 5918445 ~ 5925185 (+)
gosr2 gosr2,LOC107654523,LOC102776032,LOC106601130 other upstream 75682 5003548 ~ 5014516 (+)
psmc3ip psmc3ip other upstream 368730 4712873 ~ 4721468 (+)
retreg3 fam134c other upstream 378882 4692477 ~ 4711316 (+)
plekhh3 plekhh3,LOC107601293,LOC107720008,LOC107688129 other upstream 419552 4620218 ~ 4670646 (+)
trnae-cuc_26 NA other upstream 1118948 3971179 ~ 3971250 (+)
G206166 NA other downstream 567329 5657612 ~ 5660848 (+)
tmem98 tmem98,LOC107674611,LOC107738157,LOC107654470,LOC107720031 other downstream 799269 5889552 ~ 5898200 (+)
si:ch211-198p11.6 LOC108276725 other downstream 1040497 6130780 ~ 6134572 (+)
mapk3 mapk3,LOC108256206,LOC108411041,LOC107567791,LOC107690275,LOC107686994 other downstream 1070051 6160334 ~ 6175366 (+)
ypel3 ypel3,ypela,LOC108259066,LOC103040367,LOC108411043,LOC103393221,LOC105012807,LOC107686999,LOC107590566,LOC106600728 other downstream 1089813 6180096 ~ 6194964 (+)

Expression


Co-expression Network