tmem14cb (LOC108263890)


Basic Information

Item Value
gene id tmem14cb
gene name LOC108263890
gene type misc
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047595.1
NCBI id CM018541.1
chromosome length 35600603
location 13024527 ~ 13028092 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU8742
CCTGAGTACTAGTTCATCCGGGTACTTTTGCTGTTTACCTACTGAGGTATACATAGCTTGCTGTATTTAAGTTGGAATTTAATGCTGGTAGCATATTGTATAGTGCGATTTCTAGCTTAAACACTGctgtttagtttgttttaatTCAGATTTGTACATTAGGCATGGCTGTAGATTGGCTCGGATATGTTTTCGCTGCACTGACAGCAACAGGAGGCATCATTGGTTACATAAAAGCAGgCAGTATCATGTCATTGGTAGGTGGACTAGTCTTTGGGTTTTTGGCAGCACTCGGCTCTCTCCAGGTGTCTCAGAATCCAAAAAACATCTGGCTTTCATTTGGGACGTACGGAACGCTGGCAGTTCTGATGGGAGTGAGATTTCTGAGCTCGTGGAAAATAATGCCGGCTGGGTTGATAACAGGAGCAAGTTTATTCATGGTTTTGAGATTAGGACTGGGGTTCCTATGGCCACGCAAGATGAGTTGAAAAaagtaagaagaaaaaaaaaccaacatggaccaatgatctgcttgTTTTTCTCTTGACCATGTTTGTTGGCAAGGGCTGAgcaatataatgatataatatacATATCGTGATGAATTATGCCATTATTTATGCCAAGATATTCTggtatgatttttaaaaataattataaactcATTAGACGCAGCTGAATTTATGTTAAAATTTGAacctttccatttttttcccctttattcctttataca
>XM_026926194.2
GTTAGAGTATTccgacttttattttgaaatgtcctCGCTGCATCTTATAATGGAGTACTGCCTGAGTACTAGTTCATCCGGGTACTTTTGCTGTTTACCTACTGAGGCATGGCTGTAGATTGGCTCGGATATGTTTTCGCTGCACTGACAGCAACAGGAGGCATCATTGGTTACATAAAAGCAGgCAGTATCATGTCATTGGTAGGTGGACTAGTCTTTGGGTTTTTGGCAGCACTCGGCTCTCTCCAGGTGTCTCAGAATCCAAAAAACATCTGGCTTTCATTTGGGACGTACGGAACGCTGGCAGTTCTGATGGGAGTGAGATTTCTGAGCTCGTGGAAAATAATGCCGGCTGGGTTGATAACAGGAGCAAGTTTATTCATGGTTTTGAGATTAGGACTGGGGTTCCTATGGCCACGCAAGATGAGTTGAAAAaagtaagaag
>XM_034308660.1
GGAGTACTGCCTGAGTACTAGTTCATCCGGGTACTTTTGCTGTTTACCTACTGAGGTATACATAGCTTGCTGTATTTAAGTTGGAATTTAATGCTGGTAGCATATTGTATAGTGCGATTTCTAGCTTAAACACTGctgtttagtttgttttaatTCAGATTTGTACATTAGGCATGGCTGTAGATTGGCTCGGATATGTTTTCGCTGCACTGACAGCAACAGGAGGCATCATTGGTTACATAAAAGCAGgCAGTATCATGTCATTGGTAGGTGGACTAGTCTTTGGGTTTTTGGCAGCACTCGGCTCTCTCCAGGTGTCTCAGAATCCAAAAAACATCTGGCTTTCATTTGGGACGTACGGAACGCTGGCAGTTCTGATGGGAGTGAGATTTCTGAGCTCGTGGAAAATAATGCCGGCTGGGTTGATAACAGGAGCAAGTTTATTCATGGTTTTGAGATTAGGACTGGGGTTCCTATGGCCACGCAAGATGAGTTGAAAAaagtaagaag

Function

NR:

description
PREDICTED: transmembrane protein 14C-like

GO:

id name namespace
GO:0006783 heme biosynthetic process biological_process
GO:0016020 membrane cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU8742 True 733 TUCP 0.39 4 13024527 13028032
XM_026926194.2 False 445 mRNA 0.45 5 13024759 13028092
XM_034308660.1 False 510 mRNA 0.43 4 13024759 13028041

Neighbor

gene id symbol gene type direction distance location
gnal2 gnal,LOC108439741,LOC108262790 coding downstream 1178 13002737 ~ 13023349 (-)
dtna dtna coding downstream 165845 12835463 ~ 12858682 (-)
cebpd cebpd coding downstream 191926 12831218 ~ 12832601 (-)
sntg1 sntg1 coding downstream 318592 12677056 ~ 12705935 (-)
agap3 agap3 coding downstream 485610 12392318 ~ 12538917 (-)
pak1ip1 pak1ip1 coding upstream 1405 13029497 ~ 13035735 (-)
psme1 psme1,LOC107560248,LOC107657834,LOC107725710,LOC106579617 coding upstream 8321 13036413 ~ 13042672 (-)
pck2 pck2,LOC108263838,LOC107725708,LOC107691411,LOC107657833 coding upstream 18989 13047081 ~ 13055822 (-)
arf2b arf2b,LOC107677191,LOC107554546,LOC105892790,LOC108263862,LOC108429183 coding upstream 32037 13060129 ~ 13065682 (-)
LOC113533797 LOC108263809 coding upstream 39150 13067242 ~ 13077211 (-)
G7366 NA non-coding downstream 60483 12960955 ~ 12964044 (-)
G7319 NA non-coding downstream 138158 12886139 ~ 12886369 (-)
G7266 NA non-coding downstream 306536 12717739 ~ 12717991 (-)
G7250 pcmtd1 non-coding downstream 349168 12671171 ~ 12675359 (-)
G7154 NA non-coding downstream 648010 12374145 ~ 12376517 (-)
G7404 NA non-coding upstream 123395 13151487 ~ 13152079 (-)
G7428 NA non-coding upstream 331761 13359853 ~ 13363262 (-)
G7505 NA non-coding upstream 658289 13686381 ~ 13687085 (-)
G7510 NA non-coding upstream 683687 13711779 ~ 13712047 (-)
G7549 NA non-coding upstream 760138 13788230 ~ 13854845 (-)
G7357 obscn other downstream 72920 12943683 ~ 12951607 (-)
ndufa3 ndufa3 other downstream 840946 12181268 ~ 12183581 (-)
zgc:114120 LOC108269801,LOC108429184 other downstream 1049214 11915926 ~ 11975313 (-)
nlrc3 nlrc3 other downstream 1601165 11404403 ~ 11423362 (-)
G6312 NA other downstream 1731061 11293047 ~ 11293466 (-)
cers2b LOC100304753,LOC108410638 other upstream 78368 13106460 ~ 13119957 (-)
rprd2b LOC108265649 other upstream 188261 13216353 ~ 13235949 (-)
LOC113534113 adamts16 other upstream 210243 13238335 ~ 13270986 (-)
nrsn1 nrsn1 other upstream 847608 13875700 ~ 13885595 (-)
LOC113534155 pl8l1,LOC107755659,LOC107588526,LOC106583166,LOC107700712,LOC107704880,LOC107705924 other upstream 1514677 14542769 ~ 14545317 (-)

Expression


Co-expression Network