zdhhc7 (zdhhc7,LOC108435925,LOC107573093,LOC107705792,LOC107736389,LOC107686620,LOC107601043)


Basic Information

Item Value
gene id zdhhc7
gene name zdhhc7,LOC108435925,LOC107573093,LOC107705792,LOC107736389,LOC107686620,LOC107601043
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047600.1
NCBI id CM018546.1
chromosome length 31307711
location 27865109 ~ 27878619 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026913760.2
TTctgaaggaagaagaagagcagaCAGGCAGAGGAACCCGGAAGTGTGTGCCACTCGCTTTTCAAAATATCCACTTAGACCAGGAGGGACGTATTTTCCTGGCTGGATATAATAATGAAATCGGGTGTGTACACTCCACTTTTGCAGATTTTGGAAAACAGCCGTTGGGTGAATTATTTCGgttaaCCCTGTGGATGTGGCCTTGTCTCTGCTGTCCAGCAGCTCATCATGTCAATGTGAAGTCCACTCTCTGAGGTAGAGCAGAATGCAGACTTCCGGACACCGGCTGCGGGATGTGGAGCAGCACCATCCCTTGCTGTCCAGCGGGGAGGAGGAGGTGACCGTGGGCCGGGTCTGGTTCATCCAGGACGGCTGCGGCATGGTGTGCGCCTCCATGACCTGGTTTCTAGTGATGTACGCAGAATTCGTGGTGAACTTCGTCATGCTTCTGCCCTCCAAAAGCTTTTGGTACTCGTTCATCAACGGCGTGGCGTTCAACTTCTTGGCCGTGCTGGCACTAGCGTCGCACATGCGCACCATGCTGACAGATCCGGGAGCTGTTCCGAAGGGAAATGCCACTAAGGAATACATGGACAGTCTACAGCTGAAACCGGGGGAAGTCATTTACAAGTGCCCTAAATGCTGCAGCATCAAACCAGAGAGAGCTCATCACTGCAGCATCTGCAAGAGATGCATCAGGAAAATGGATCATCACTGTCCCTGGGTGAACAACTGCGTTGGAGAAAACAACCAGCGATACTTTGTGCTGTTCACTATGTACATCGCTTCAATCTCTCTGCATGCCCTCTGTCTCAGTGGTTTCCACTTCTTCACCTGCGTCAAAGTCCAGTGGAACGAGTGTAGTGACTTCTCCCCTCCCGTGGCTGTCATGCTCCTCATTTTCTTGTGTCTGGAggctctcctcttcctcaccttCACCGCTGTCATGTTCGGCACCCAGATTCACTCCATCTGCAACGACGAGACGGAGATCGAGAGGCTGAAGAACGAGAAGCCGACGTGGGAGCGGCGAGTGCGCTGGGACGGGATGAAGGCTGTGTTCGGAGGCCCGCCGTCTCTCCTGTGGTTCAACCCTTTCGCTGGACTgagactgcgacgcctcctgaTGATCCACGCTCGGAAGGGCGGCTCCGAGTTCGCCGTCTGAGCCGAGGAAGCTCACGTTTCTCCGCACGTCAGCGTACCAGCGTGCCTGTTAAGACCCCACGCGTAGAGGACACATGGCACAATGACGCAGGTACGGGGACTCGGGGAAGAGAGAGTGTAATAATCCTGAGGCCTAGTGGAGGAGAAGGGCCTAAATATGATGAACTACCTGTTAAAACCACTGGACCTCAACCGAAGGATCATTTTTACTTTGGCTTCTCTTGGCTGGGTCtgacctttattttttttttcccgtgaatagatttattatttttttttgctttgttttgtttttaaaggactcttttttctgtattttgttgAAAACAGAcctttaagaagaaaaaaaaaaaaaacatgaacaatcTCAAAGTTCATTTGAACAGCATTAGTATCTGAATCTACCAAACTGAAACATCTCATTTGCCAAGAACCTTCTGGAACCTTCTTATGCATTAAGATTTACTTtctaataaaatgctaaaatgcgaATTATTCCTAGATTTAGAATCATGATACATAAACAACAGTTTATTTAACTTCCTAATATAGTAGAAATGATGTTAAACCtcatttataacttttttttttttttacattcatctAAATGGCACTGAATATTTAGACAAACCATTTACACTGTTTACCTTCCGTGATGCTACATCCAAGATCAACGCTGCAGTTGCTTGGCATGAATGTAGACCGATTCCATTAGAGAACATGCTGTAGAGATAACGCATGACTTTTTGCACACTCGAGTTCAGTCGTTACAGCAGAGAAAGAGACGTTAGACGAGAGCCTCGTGAAACTCCGACGTTTTACTGAACTCTCTAAGCAGCTGAAGACGTGTGCTGGATGTAgtcttgtgtgttttataaGGTGGCTAACGGTCGAATTAAGGAATCACGTGATGTTAGCAATACTGTGGCTGCGTCTTCACAAGAGCTTTTACCTCAACAGTTAAGACTTTATCATGACAATTCTTTAATTATTGCAGATGTTTTATACAGTAGACGCAGAGTATTTTGAATGGTATTGGATTCGATGTGGGCCGTAAAGAACCGACTGAAAATCTGTGTTTCCGCTCTATGAAGTAgtgtattgtaaataaaaaaaaaaaaaaagctaaaggGAATGGATTTATTAATTATACCAGGCTACCCATAAAGCTTTCTGTTTCAGTCTTCATGATATATGCAGTATAAAAAGCATCTAAACATTTCCACGCATCCTTCTCCCATCAGGACGTCGGGTTCTTCAGTGCCATGACATTCAACAGTATTGGTTTCTATTCATTCTGCACATGACACTCTTGAAATGTGgggttcatctctctctctctctctctctctctagaccAATATTTCCCAATTCCAGTCCAGAATTAACTCTCCTGATTGTGTTACGTATCCCTTTACCTCCCAAGTCATTTAACCCATTATGCAGCGTTCACAAGAACCTAATATTTATCCTAATATTTATCCAAaaaatgcacctttaatgtgtTGTAGCAGTGGAATTATTTATAAGTTTTCAAGATACAATTCCTTCTGATGCAACTGCATTGATCTTGAaagaaatataacaaaatgaACGCCATGTTCAATGCTAAAAACTGAATGAATTATCTACACGAGTGACCCGGGCAGCGTTCACAAGCTCACCCTGGACACTGATATTCATAAAGAAAAAGCATAACTGTCTTAATAATATCTTTATTGTGTTAGAATATTTCTTACACAAGCCTGAATCACTGAATTAATTTGAAATTTAGTGTGTTGCATTGTATCGAATCTTTTGAATCAGTCACTTTTGAATCAACtacaatgaaaatgaatgaatcgaTTCACGAATCAATTCACTGTCAGATAGAAAAGTACCAGCGCTTGCTAAAGCATCAAAATTACACTCCAttctccatttaaaaa
>XM_026913761.2
TTTctgaaggaagaagaagagcagaCAGGCAGAGGAACCCGGAAGTGTGTGCCACTCGCTTTTCAAAATATCCACTTAGACCAGGAGGGACGTATTTTCCTGGCTGGATATAATAATGAAATCGGGTGTGTACACTCCACTTTTGCAGATTTTGGAAAACAGCCGTTGGGTGAATTATTTCGgttaaCCCTGTGGATGTGGCCTTGTCTCTGCTGTCCAGCAGCTCATCATGTCAATGTGAAGTCCACTCTCTGAGtgtaggaaGTTGCAGAGGTAGCAATGTAACCTgtttacaacagcagcagattCCGCAGCCAGAAGTGTTTTCAGTGCAGTCGTGTCCCTGCGCAGAGAAACGGAGGTGGTTGTAGTGTGATTTAGGGTAGAGCAGAATGCAGACTTCCGGACACCGGCTGCGGGATGTGGAGCAGCACCATCCCTTGCTGTCCAGCGGGGAGGAGGAGGTGACCGTGGGCCGGGTCTGGTTCATCCAGGACGGCTGCGGCATGGTGTGCGCCTCCATGACCTGGTTTCTAGTGATGTACGCAGAATTCGTGGTGAACTTCGTCATGCTTCTGCCCTCCAAAAGCTTTTGGTACTCGTTCATCAACGGCGTGGCGTTCAACTTCTTGGCCGTGCTGGCACTAGCGTCGCACATGCGCACCATGCTGACAGATCCGGGAGCTGTTCCGAAGGGAAATGCCACTAAGGAATACATGGACAGTCTACAGCTGAAACCGGGGGAAGTCATTTACAAGTGCCCTAAATGCTGCAGCATCAAACCAGAGAGAGCTCATCACTGCAGCATCTGCAAGAGATGCATCAGGAAAATGGATCATCACTGTCCCTGGGTGAACAACTGCGTTGGAGAAAACAACCAGCGATACTTTGTGCTGTTCACTATGTACATCGCTTCAATCTCTCTGCATGCCCTCTGTCTCAGTGGTTTCCACTTCTTCACCTGCGTCAAAGTCCAGTGGAACGAGTGTAGTGACTTCTCCCCTCCCGTGGCTGTCATGCTCCTCATTTTCTTGTGTCTGGAggctctcctcttcctcaccttCACCGCTGTCATGTTCGGCACCCAGATTCACTCCATCTGCAACGACGAGACGGAGATCGAGAGGCTGAAGAACGAGAAGCCGACGTGGGAGCGGCGAGTGCGCTGGGACGGGATGAAGGCTGTGTTCGGAGGCCCGCCGTCTCTCCTGTGGTTCAACCCTTTCGCTGGACTgagactgcgacgcctcctgaTGATCCACGCTCGGAAGGGCGGCTCCGAGTTCGCCGTCTGAGCCGAGGAAGCTCACGTTTCTCCGCACGTCAGCGTACCAGCGTGCCTGTTAAGACCCCACGCGTAGAGGACACATGGCACAATGACGCAGGTACGGGGACTCGGGGAAGAGAGAGTGTAATAATCCTGAGGCCTAGTGGAGGAGAAGGGCCTAAATATGATGAACTACCTGTTAAAACCACTGGACCTCAACCGAAGGATCATTTTTACTTTGGCTTCTCTTGGCTGGGTCtgacctttattttttttttcccgtgaatagatttattatttttttttgctttgttttgtttttaaaggactcttttttctgtattttgttgAAAACAGAcctttaagaagaaaaaaaaaaaaaacatgaacaatcTCAAAGTTCATTTGAACAGCATTAGTATCTGAATCTACCAAACTGAAACATCTCATTTGCCAAGAACCTTCTGGAACCTTCTTATGCATTAAGATTTACTTtctaataaaatgctaaaatgcgaATTATTCCTAGATTTAGAATCATGATACATAAACAACAGTTTATTTAACTTCCTAATATAGTAGAAATGATGTTAAACCtcatttataacttttttttttttttacattcatctAAATGGCACTGAATATTTAGACAAACCATTTACACTGTTTACCTTCCGTGATGCTACATCCAAGATCAACGCTGCAGTTGCTTGGCATGAATGTAGACCGATTCCATTAGAGAACATGCTGTAGAGATAACGCATGACTTTTTGCACACTCGAGTTCAGTCGTTACAGCAGAGAAAGAGACGTTAGACGAGAGCCTCGTGAAACTCCGACGTTTTACTGAACTCTCTAAGCAGCTGAAGACGTGTGCTGGATGTAgtcttgtgtgttttataaGGTGGCTAACGGTCGAATTAAGGAATCACGTGATGTTAGCAATACTGTGGCTGCGTCTTCACAAGAGCTTTTACCTCAACAGTTAAGACTTTATCATGACAATTCTTTAATTATTGCAGATGTTTTATACAGTAGACGCAGAGTATTTTGAATGGTATTGGATTCGATGTGGGCCGTAAAGAACCGACTGAAAATCTGTGTTTCCGCTCTATGAAGTAgtgtattgtaaataaaaaaaaaaaaaaagctaaaggGAATGGATTTATTAATTATACCAGGCTACCCATAAAGCTTTCTGTTTCAGTCTTCATGATATATGCAGTATAAAAAGCATCTAAACATTTCCACGCATCCTTCTCCCATCAGGACGTCGGGTTCTTCAGTGCCATGACATTCAACAGTATTGGTTTCTATTCATTCTGCACATGACACTCTTGAAATGTGgggttcatctctctctctctctctctctctctagaccAATATTTCCCAATTCCAGTCCAGAATTAACTCTCCTGATTGTGTTACGTATCCCTTTACCTCCCAAGTCATTTAACCCATTATGCAGCGTTCACAAGAACCTAATATTTATCCTAATATTTATCCAAaaaatgcacctttaatgtgtTGTAGCAGTGGAATTATTTATAAGTTTTCAAGATACAATTCCTTCTGATGCAACTGCATTGATCTTGAaagaaatataacaaaatgaACGCCATGTTCAATGCTAAAAACTGAATGAATTATCTACACGAGTGACCCGGGCAGCGTTCACAAGCTCACCCTGGACACTGATATTCATAAAGAAAAAGCATAACTGTCTTAATAATATCTTTATTGTGTTAGAATATTTCTTACACAAGCCTGAATCACTGAATTAATTTGAAATTTAGTGTGTTGCATTGTATCGAATCTTTTGAATCAGTCACTTTTGAATCAACtacaatgaaaatgaatgaatcgaTTCACGAATCAATTCACTGTCAGATAGAAAAGTACCAGCGCTTGCTAAAGCATCAAAATTACACTCCAttctccatttaaaaa

Function

symbol description
zdhhc7 Enables S-acyltransferase activity. Involved in peptidyl-L-cysteine S-palmitoylation. Predicted to be located in Golgi membrane. Predicted to be integral component of membrane. Predicted to be active in Golgi apparatus and endoplasmic reticulum. Orthologous to human ZDHHC7 (zinc finger DHHC-type palmitoyltransferase 7).

NR:

description
PREDICTED: palmitoyltransferase ZDHHC7 isoform X2

GO:

id name namespace
GO:0016021 integral component of membrane cellular_component
GO:0016746 transferase activity, transferring acyl groups molecular_function
GO:0008270 zinc ion binding molecular_function

KEGG:

id description
K20029 ZDHHC3_7_25; palmitoyltransferase ZDHHC3/7/25

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026913760.2 False 3095 mRNA 0.43 8 27865109 27878618
XM_026913761.2 True 3222 mRNA 0.43 9 27865109 27878619

Neighbor

gene id symbol gene type direction distance location
cog8 cog8,LOC107686577,LOC107573089,LOC107600188 coding downstream 5748 27854836 ~ 27859361 (-)
wdr59 wdr59,LOC107686576 coding downstream 18287 27825324 ~ 27846822 (-)
glg1b glg1,LOC107686575,LOC107705797,LOC107573092,LOC105906547 coding downstream 41883 27781821 ~ 27823226 (-)
si:ch73-386h18.1 zfhx3,LOC108264658 coding downstream 96306 27734339 ~ 27768803 (-)
otogl otogl,LOC107736094,LOC107686601,LOC107662850,LOC107600679 coding downstream 156338 27662408 ~ 27708771 (-)
LOC113526894 LOC108263898 coding upstream 47271 27925890 ~ 27939822 (-)
LOC113526564 dbndd1 coding upstream 304914 28183533 ~ 28205626 (-)
foxf1 foxf1 coding upstream 350819 28229438 ~ 28233387 (-)
irf8 irf8 coding upstream 536516 28415135 ~ 28422985 (-)
dusp22a ds22a,LOC105892932,LOC108434600,LOC106562285 coding upstream 545178 28423797 ~ 28446938 (-)
G106193 NA non-coding downstream 83309 27779132 ~ 27781800 (-)
LOC113526487 LOC108264058 non-coding downstream 676317 27188342 ~ 27188792 (-)
LOC117597606 LOC108264746 non-coding downstream 720235 27143707 ~ 27144874 (-)
G105842 NA non-coding downstream 735937 27123277 ~ 27129172 (-)
G105835 LOC108264191,LOC108436995,LOC101161623 non-coding downstream 757538 27105368 ~ 27107571 (-)
G106258 NA non-coding upstream 66197 27944816 ~ 27945033 (-)
G106259 LOC108263905 non-coding upstream 74899 27953518 ~ 27953990 (-)
G106260 NA non-coding upstream 75645 27954264 ~ 27954479 (-)
G106264 NA non-coding upstream 85152 27963771 ~ 27964010 (-)
G106265 NA non-coding upstream 86444 27965063 ~ 27966251 (-)
si:dkey-151j17.4 NA other downstream 705010 27144888 ~ 27160099 (-)
LOC113526510 LOC108264700,LOC108261657 other downstream 1256770 26569085 ~ 26608339 (-)
G105376 NA other downstream 1624104 26239330 ~ 26241005 (-)
si:cabz01090165.1 zmp:0000001073,LOC108264041,LOC108429879,LOC107692477,LOC107722287,LOC107566287,LOC107713869 other downstream 2316181 25385325 ~ 25548928 (-)
tmem91 tmem91,LOC107676753,LOC107757682,LOC107758240 other downstream 2785597 25043786 ~ 25079512 (-)
hipk3b hipk3,LOC108264637 other upstream 1742180 29620799 ~ 29714001 (-)
G107525 NA other upstream 2464912 30343531 ~ 30344876 (-)
bbs10 bbs10 other upstream 2849425 30728044 ~ 30732059 (-)
selenot1b LOC108264179,LOC108429894 other upstream 2906974 30785593 ~ 30849697 (-)
G107803 NA other upstream 2937960 30816579 ~ 30820422 (-)

Expression


Co-expression Network