wdr59 (wdr59,LOC107686576)


Basic Information

Item Value
gene id wdr59
gene name wdr59,LOC107686576
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047600.1
NCBI id CM018546.1
chromosome length 31307711
location 27825324 ~ 27846822 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026914381.2
CCTGATGTCATTTGTTGATGTTTTAGTGGGAGAAACATGGCGGCCCGGTGGAGCAGCGAGAATGTCGTGGTGGAGTTTAGAGACGCTCAGGCTACTGCGATGTCAGTGGACTGTCTAGGGCACTATGCTGTTCTTTCTGGGAGACGTTTCTTGTATGTTGTGAACCTGGAGGCGCCGTCAGAGGCTCCTCGAAAAATAGGCCGTCAGAGCAAGTGGGATGTCGGCACGGTGCAGTGGAATCCGCACAAGACAGAAGCTCATCTATTCGCAGCATCAagtaATCAGCGTGTGGACCTGTATGTATGGCGTGATGGATGTGGAGAGTCTCACACGTCCCTACAAGGCCACACACGAGTTATAAGCGATTTGGATTGGTCATGGTTTGAGCCAGAATTTCTCGTCACAAGTTCAGTAGACACCTACATCTACATATGGGACACAAGagacACACGTAAGCCTACAGGAGCTCTATCAGCAGTGGCTGGAGCATCTCAGGTGAAGTGGAACAGAAAGAATCAGCACTGCTTGGCCTCTAGTCACGACGGAGACGTCAGGATCTGGGACAGACGGaaacccaacactgctgtTGAATACGTAGCCGCTCACTTATCTAAGATTCACGGCTTGGACTGGCATCCTGACAACGAGTATATACTGGCAACCTCCAGCCAGGACAACTCAGTTAGGTTCTGGGACTACAGACAACCTCGAAAATACCTCAATATCTTGTCCTGCCAAGTTCCGGTTTGGAAGGCCAGATACACTCCATTTTCCAACGGGCTGGTGACGGTGATGGTGCCGCAGCTCAGGCGGGAGAACAGCCTCCTGCTGTGGAGTACGCTGGACCTCAACAGCCCCGTTCATGCCTTCGTAGGTCATGACGACGTGGTGCTCGAATTTCAGTGGAGACCTCAGAAAGAagGATCTAAGGACTGCCAGCTTGTCACATGGTCCAGAGATCAGACGCTTCGGATATGGAGGGTGGATCCTCAGTTACAGAAGTTATGCACCAGCGACATTGTGGAGGAGCTGATGGAAGGCATGACTCTCACAACAGAGTCTGAGAAGACACTCCGCTCCCAGGAACCTCCTCTGAGCCCCAGTCTAACTGCCGACGACCTGCAGGGTCAGTTCGAGGCATCCAGTGGCAGGCAGGACCCGGCTGGCCTCGCTCAGACTCTGCAGCAAGAGTTCTCACTGGTCAACCTGCAGATCCGCAACGTCAATGTGGAGatggatGCTGTGAACCGCACCTGCTTCGTCTCGGCTCACTGTGGAGCGAATCAGGTCAGACTGGTGGTGAAGTTTCCTGCACAGTATCCAAACAATGCTGCACCGTCTTTCCAGTTTGTTCCCCCAACAACCATCTCGTCCTCCATGAAGACCAAGATACAGAAGATTTTGACAGACACGTCACTTCAGAAAGTGAAGAGGAACCAAAACTGCCTGGAGCCGTGTGTGAGGCAGCTGGTGTCCTGCCTCGAATCAGACGCGGAGGACGGCACTAATCCCCATGTGTTCAGTAACTCGGTGAGCCCTGCTCTTCCGGCCTTCCCTCGTGTAACCAACACTTACGGCTCTTACCAGGACGCTAACATCCCTTTCCCACGTACCTCAGGTGCTCGCTTCTGCGGCACAGGCTCTCTGGTTTACTTCACTCGGCCCATGTCCATGCATCGCACTGTCCCTCCTACAGAACCTACACCTAGATCCCTCTCAGCGCTGTCTGCGTACCACAGTGGCCTTATGACTCCGATGAAAATGCGCAGCGAGTCTCAGTCCACGCTGCGGCTCTACAGCGGGAGTCCGACACGCACCGATAAAGAACAAGTGTCCATCTCCTCCTTCTACTACAAGGAGCGGAAATCACGGCGCTGGAAAGGGAAACGAGAGGGAACCGACTACAGCAATAAAACGATCAAACTGGCTGGTAAAGTGATCATACAGGAGATCTCCTGTCTCCTGCCCATTCACAAAGCCCTCGGAGAGACCTACGTattAAATATGAACGACATACGGGACACGTGTCAGAAGAATGCAgccgcagctctgacagtaggaCGCAGAGATTTAGCAAAGGTTTGGGCTTTGGCCTCTGCAGCGACCAGTCTCGACCTGTGTCCTGACTCCGATCCTGACGCTGACACTCCTTGGGCTCGACACCCTTTTGGGCGACAGCTACTGGAGACTTTGCTTGAACACTACAGTCAGATGAGTGACGTGCAGACTCTGGCCATGCTGTGCAGTGTGTTCAGGGGTCAGGGGATCCCTCAGGACTATTTCACACTGTACAGCCCACGCAGCTCCGGCTTCACCCTCCACCACTCGCGCTATCCCAGCTTCACTTCTAGCTCTGTGACGTCTGGTTCCTGCTCCAGTACCTCCGACTCCATCACCGCTCCGTGGAACATGGctGGACGGGATGCTGAACAAGCTCTACCGTGGGGAGAGTCCTCTCCTGACGACGTTCGCTACGCAAACCAGGCTTACACAGATCCCCGGGAACGAGAGAAAGAGCAACACGACATGAACAAAAGATTATTAGACCCGGCTAACACCTTGCAGTTTGACGACTTTAAGAAGTGTTACGGAGAGATTCTGCACCGCTGGGGGCTGAAGGAAAAGAGGGCAGAAGTGCTGAAGTTTGTTTCCTGCCCTCCAGAGCCACACAAGGGGATCGAGTTCGGCGTGTACTGCTGCCACTGTCGGAGCCAGGCCAGAGGCACTCAGTGCGCCGTGTGCAAGCGCTTCACCTTCCAGTGCGCCATCTGCCACGTGGCCGTCCGCGGCTCGTCCAATTTCTGCCTGAGCTGCGGCCACGGCGGCCACACGAGCCACATGATGGAGTGGTTCCGCTCGCAGGAAGTTTGTCCTACGGGCTGCGGCTGTCACTGTCTCCTCCAGAGCACTTTCTGAACCTCTTCTACACGGACCCGGACATGACGAAGGTCTCAGGGTGCGTCTCAAACCTCTCGGTACTGTAACAGAGCCTGgactgttgatttttttttttttttttttaataaacagcaCTGATACAGATCATGGATttctgtgctgctctgactaGACCTTTTATAATAGTGGTCTTCACAGTATGCAAGaaaccaagaaaccacaaacacaTGAGTTACAGTTTACACCAGCCTTATTCAGTAATAAttgctcataaaaaaaaaaagaagtgccATTTTTATGCAGTCCTGGTTCGGTTACATTGCAGGGTTTTCTCCTCAATCTGTGAACACCAACACGTATAGATGGACTGAATGTGCTGCTGATTTTACACTCACAGCTGAAAAGCGCCGTTTTGTATGTTGTGTTCTGTCTTTTCATTTGAAAAGAGAATAGCTAAGAACTGTGCTCTTGTGTAAGGGAGTAGTATTAAATGATTAACCAGCACCTACAAAGTTTATGCCctaaatgaagaaataaatttgtttaaataactGCACCA
>XM_034305151.1
CCTGATGTCATTTGTTGATGTTTTAGTGGGAGAAACATGGCGGCCCGGTGGAGCAGCGAGAATGTCGTGGTGGAGTTTAGAGACGCTCAGGCTACTGCGATGTCAGTGGACTGTCTAGGGCACTATGCTGTTCTTTCTGGGAGACGTTTCTTGTATGTTGTGAACCTGGAGGCGCCGTCAGAGGCTCCTCGAAAAATAGGCCGTCAGAGCAAGTGGGATGTCGGCACGGTGCAGTGGAATCCGCACAAGACAGAAGCTCATCTATTCGCAGCATCAagtaATCAGCGTGTGGACCTGTATGTATGGCGTGATGGATGTGGAGAGTCTCACACGTCCCTACAAGGCCACACACGAGTTATAAGCGATTTGGATTGGTCATGGTTTGAGCCAGAATTTCTCGTCACAAGTTCAGTAGACACCTACATCTACATATGGGACACAAGagacACACGTAAGCCTACAGGAGCTCTATCAGCAGTGGCTGGAGCATCTCAGGTGAAGTGGAACAGAAAGAATCAGCACTGCTTGGCCTCTAGTCACGACGGAGACGTCAGGATCTGGGACAGACGGaaacccaacactgctgtTGAATACGTAGCCGCTCACTTATCTAAGATTCACGGCTTGGACTGGCATCCTGACAACGAGTATATACTGGCAACCTCCAGCCAGGACAACTCAGTTAGGTTCTGGGACTACAGACAACCTCGAAAATACCTCAATATCTTGTCCTGCCAAGTTCCGGTTTGGAAGGCCAGATACACTCCATTTTCCAACGGGCTGGTGACGGTGATGGTGCCGCAGCTCAGGCGGGAGAACAGCCTCCTGCTGTGGAGTACGCTGGACCTCAACAGCCCCGTTCATGCCTTCGTAGGTCATGACGACGTGGTGCTCGAATTTCAGTGGAGACCTCAGAAAGAagGATCTAAGGACTGCCAGCTTGTCACATGGTCCAGAGATCAGACGCTTCGGATATGGAGGGTGGATCCTCAGTTACAGAAGTTATGCACCAGCGACATTGTGGAGGAGCTGATGGAAGGCATGACTCTCACAACAGAGTCTGAGAAGACACTCCGCTCCCAGGAACCTCCTCTGAGCCCCAGTCTAACTGCCGACGACCTGCAGGGTCAGTTCGAGGCATCCAGTGGCAGGCAGGACCCGGCTGGCCTCGCTCAGACTCTGCAGCAAGAGTTCTCACTGGTCAACCTGCAGATCCGCAACGTCAATGTGGAGatggatGCTGTGAACCGCACCTGCTTCGTCTCGGCTCACTGTGGAGCGAATCAGGTCAGACTGGTGGTGAAGTTTCCTGCACAGTATCCAAACAATGCTGCACCGTCTTTCCAGTTTGTTCCCCCAACAACCATCTCGTCCTCCATGAAGACCAAGATACAGAAGATTTTGACAGACACGTCACTTCAGAAAGTGAAGAGGAACCAAAACTGCCTGGAGCCGTGTGTGAGGCAGCTGGTGTCCTGCCTCGAATCAGACGCGGAGGACGGCACTAATCCCCATGTGTTCAGTAACTCGGTGAGCCCTGCTCTTCCGGCCTTCCCTCGTGTAACCAACACTTACGGCTCTTACCAGGACGCTAACATCCCTTTCCCACGTACCTCAGGTGCTCGCTTCTGCGGCACAGGCTCTCTGGTTTACTTCACTCGGCCCATGTCCATGCATCGCACTGTCCCTCCTACAGAACCTACACCTAGATCCCTCTCAGCGCTGTCTGCGTACCACAGTGGCCTTATGACTCCGATGAAAATGCGCAGCGAGTCTCAGTCCACGCTGCGGCTCTACAGCGGGAGTCCGACACGCACCGATAAAGAACAAGTGTCCATCTCCTCCTTCTACTACAAGGAGCGGAAGCCTCTGTCTGTTCATCGCCGCTGGTCTGTGCAGACTATTGCTGACTGTCCGAAATCACGGCGCTGGAAAGGGAAACGAGAGGGAACCGACTACAGCAATAAAACGATCAAACTGGCTGGTAAAGTGATCATACAGGAGATCTCCTGTCTCCTGCCCATTCACAAAGCCCTCGGAGAGACCTACGTattAAATATGAACGACATACGGGACACGTGTCAGAAGAATGCAgccgcagctctgacagtaggaCGCAGAGATTTAGCAAAGGTTTGGGCTTTGGCCTCTGCAGCGACCAGTCTCGACCTGTGTCCTGACTCCGATCCTGACGCTGACACTCCTTGGGCTCGACACCCTTTTGGGCGACAGCTACTGGAGACTTTGCTTGAACACTACAGTCAGATGAGTGACGTGCAGACTCTGGCCATGCTGTGCAGTGTGTTCAGGGGTCAGGGGATCCCTCAGGACTATTTCACACTGTACAGCCCACGCAGCTCCGGCTTCACCCTCCACCACTCGCGCTATCCCAGCTTCACTTCTAGCTCTGTGACGTCTGGTTCCTGCTCCAGTACCTCCGACTCCATCACCGCTCCGTGGAACATGGctGGACGGGATGCTGAACAAGCTCTACCGTGGGGAGAGTCCTCTCCTGACGACGTTCGCTACGCAAACCAGGCTTACACAGATCCCCGGGAACGAGAGAAAGAGCAACACGACATGAACAAAAGATTATTAGACCCGGCTAACACCTTGCAGTTTGACGACTTTAAGAAGTGTTACGGAGAGATTCTGCACCGCTGGGGGCTGAAGGAAAAGAGGGCAGAAGTGCTGAAGTTTGTTTCCTGCCCTCCAGAGCCACACAAGGGGATCGAGTTCGGCGTGTACTGCTGCCACTGTCGGAGCCAGGCCAGAGGCACTCAGTGCGCCGTGTGCAAGCGCTTCACCTTCCAGTGCGCCATCTGCCACGTGGCCGTCCGCGGCTCGTCCAATTTCTGCCTGAGCTGCGGCCACGGCGGCCACACGAGCCACATGATGGAGTGGTTCCGCTCGCAGGAAGTTTGTCCTACGGGCTGCGGCTGTCACTGTCTCCTCCAGAGCACTTTCTGAACCTCTTCTACACGGACCCGGACATGACGAAGGTCTCAGGGTGCGTCTCAAACCTCTCGGTACTGTAACAGAGCCTGgactgttgatttttttttttttttttttaataaacagcaCTGATACAGATCATGGATttctgtgctgctctgactaGACCTTTTATAATAGTGGTCTTCACAGTATGCAAGaaaccaagaaaccacaaacacaTGAGTTACAGTTTACACCAGCCTTATTCAGTAATAAttgctcataaaaaaaaaaagaagtgccATTTTTATGCAGTCCTGGTTCGGTTACATTGCAGGGTTTTCTCCTCAATCTGTGAACACCAACACGTATAGATGGACTGAATGTGCTGCTGATTTTACACTCACAGCTGAAAAGCGCCGTTTTGTATGTTGTGTTCTGTCTTTTCATTTGAAAAGAGAATAGCTAAGAACTGTGCTCTTGTGTAAGGGAGTAGTATTAAATGATTAACCAGCACCTACAAAGTTTATGCCctaaatgaagaaataaatttgtttaaataactGCACCA

Function

symbol description
wdr59 Orthologous to human WDR59 (WD repeat domain 59).

NR:

description
PREDICTED: WD repeat-containing protein 59 isoform X1

GO: NA

KEGG:

id description
K20409 WDR59; WD repeat-containing protein 59

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026914381.2 False 3457 mRNA 0.52 26 27825324 27846822
XM_034305151.1 True 3511 mRNA 0.52 27 27825324 27846822

Neighbor

gene id symbol gene type direction distance location
glg1b glg1,LOC107686575,LOC107705797,LOC107573092,LOC105906547 coding downstream 2098 27781821 ~ 27823226 (-)
si:ch73-386h18.1 zfhx3,LOC108264658 coding downstream 56521 27734339 ~ 27768803 (-)
otogl otogl,LOC107736094,LOC107686601,LOC107662850,LOC107600679 coding downstream 116553 27662408 ~ 27708771 (-)
ptprq ptprq,LOC108413201,LOC107705767 coding downstream 166487 27602226 ~ 27658837 (-)
wash1 wash1,LOC103045331,LOC107686618,LOC107564895 coding downstream 267354 27546497 ~ 27557970 (-)
cog8 cog8,LOC107686577,LOC107573089,LOC107600188 coding upstream 8014 27854836 ~ 27859361 (-)
zdhhc7 zdhhc7,LOC108435925,LOC107573093,LOC107705792,LOC107736389,LOC107686620,LOC107601043 coding upstream 18287 27865109 ~ 27878619 (-)
LOC113526894 LOC108263898 coding upstream 79068 27925890 ~ 27939822 (-)
LOC113526564 dbndd1 coding upstream 336711 28183533 ~ 28205626 (-)
foxf1 foxf1 coding upstream 382616 28229438 ~ 28233387 (-)
G106193 NA non-coding downstream 43524 27779132 ~ 27781800 (-)
LOC113526487 LOC108264058 non-coding downstream 636532 27188342 ~ 27188792 (-)
LOC117597606 LOC108264746 non-coding downstream 680450 27143707 ~ 27144874 (-)
G105842 NA non-coding downstream 696152 27123277 ~ 27129172 (-)
G105835 LOC108264191,LOC108436995,LOC101161623 non-coding downstream 717753 27105368 ~ 27107571 (-)
G106195 NA non-coding upstream 15018 27861840 ~ 27905029 (-)
G106258 NA non-coding upstream 97994 27944816 ~ 27945033 (-)
G106259 LOC108263905 non-coding upstream 106696 27953518 ~ 27953990 (-)
G106260 NA non-coding upstream 107442 27954264 ~ 27954479 (-)
G106264 NA non-coding upstream 116949 27963771 ~ 27964010 (-)
si:dkey-151j17.4 NA other downstream 665225 27144888 ~ 27160099 (-)
LOC113526510 LOC108264700,LOC108261657 other downstream 1216985 26569085 ~ 26608339 (-)
G105376 NA other downstream 1584319 26239330 ~ 26241005 (-)
si:cabz01090165.1 zmp:0000001073,LOC108264041,LOC108429879,LOC107692477,LOC107722287,LOC107566287,LOC107713869 other downstream 2276396 25385325 ~ 25548928 (-)
tmem91 tmem91,LOC107676753,LOC107757682,LOC107758240 other downstream 2745812 25043786 ~ 25079512 (-)
hipk3b hipk3,LOC108264637 other upstream 1773977 29620799 ~ 29714001 (-)
G107525 NA other upstream 2496709 30343531 ~ 30344876 (-)
bbs10 bbs10 other upstream 2881222 30728044 ~ 30732059 (-)
selenot1b LOC108264179,LOC108429894 other upstream 2938771 30785593 ~ 30849697 (-)
G107803 NA other upstream 2969757 30816579 ~ 30820422 (-)

Expression


Co-expression Network