fbxo36a


Basic Information

Item Value
gene id fbxo36a
gene name NA
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047600.1
NCBI id CM018546.1
chromosome length 31307711
location 20566740 ~ 20572429 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026914384.2
TCCAAAATGGCGTCCCTGCTGCCCGAGTTACTGTTTGAGACCAGCGGTCAGGCGCCTTCTCCCTCTAAAGATTTCTATCAGCTCGCTGTAACAAAAACAGAGgtTATATGGAGGTGGTGGAAGATTTCTCTCCGTATCCAGTTGCAAGGCACGTTGCCCGGGGAAATGAAACAGAGTCATGTGGATTTTCTAAATGATGCCAGACTACAACaGCAAGTTGGTGTGGTGTTTGGGTCACAGTTACTGGAGTACACACTTGGCCTCTGTGAAGGGAGGTTTGATTATCTGGAGCGTTTGCCTGATAAGCTGCTGCTGCGTATTCTTTCCTATCTGAGCCACCAGGACATTTGCCACCTCAGCCAGACCTCACACCATTTCAGGAAGcTGTGTGACTCTAAAGAATTATGGGAACAGGCAGTGCGGCAAGGCGGTAATGAAATCACACCCGAAATAGAGATGCTGGCCAACAAGTTCGGCTGGAGGAGGATCTACATGACTTTCTATCATAATAAAGCCCAGCatggcagtgagacagacatAGACATCGAAATGGATGAAGATAAGGACAAAGATGAACCACATGAATCCCTTTAAACATGGCTCTTAGAAGCAGTTTATTAATCTCTGTGATAAATTATTGTTCTTATGTTTGCAATGTTATCATTAATGAACTTTCTTGACACGCTTGTTCCCcaactgtgtgtttgtcagaTGTGGAACACAATGTAATTACACAGCCTTTAGAGATGATTGATTGTAATGATCTAATACTTGTTCTCAGTCGCTTACATACATTTCAGAAAACAGTTTCTCTGCTTCCAAGCATTCTAGTATATTTCTCAAAACTATACAC

Function

NR:

description
F-box only protein 36

GO: NA

KEGG:

id description
K10312 FBXO36; F-box protein 36

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026914384.2 True 853 mRNA 0.43 4 20566740 20572429

Neighbor

gene id symbol gene type direction distance location
zbtb38 LOC108264297 coding downstream 2659 20541643 ~ 20564081 (-)
rasa2 rasa2,LOC108264552 coding downstream 30718 20489540 ~ 20536022 (-)
polr2i polr2i,rpb9 coding downstream 81939 20480826 ~ 20484801 (-)
pglyrp5 LOC108264553 coding downstream 90470 20473179 ~ 20476270 (-)
foxg1c NA coding downstream 95651 20470360 ~ 20471089 (-)
daw1 daw1,LOC107727686,LOC107670581,LOC107576612,LOC107717604 coding upstream 248377 20820806 ~ 20845204 (-)
LOC113526481 NA coding upstream 352549 20924978 ~ 20929950 (-)
blvrb blvrb,LOC107692505,LOC106612705 coding upstream 440806 21013235 ~ 21020541 (-)
esrrd LOC108263916 coding upstream 555519 21127948 ~ 21137281 (-)
LOC113526809 ltbp4 coding upstream 576634 21149063 ~ 21249503 (-)
G102453 NA non-coding downstream 70439 20494257 ~ 20496301 (-)
G102449 NA non-coding downstream 88184 20478333 ~ 20478556 (-)
G102444 NA non-coding downstream 93995 20471871 ~ 20472745 (-)
G102434 NA non-coding downstream 207199 20358215 ~ 20359541 (-)
G102272 NA non-coding downstream 210143 20282185 ~ 20356597 (-)
G102472 NA non-coding upstream 6261 20578690 ~ 20581168 (-)
G102458 NA non-coding upstream 66442 20638871 ~ 20686185 (-)
G102600 LOC108264595 non-coding upstream 423096 20995525 ~ 21003780 (-)
G102691 shkbp1 non-coding upstream 550886 21123315 ~ 21124955 (-)
G102809 NA non-coding upstream 736874 21309303 ~ 21312468 (-)
akt2 akt2,LOC108264340,LOC107711004,LOC107557843,LOC107692744,LOC107714435,LOC107572728 other downstream 150166 20395866 ~ 20416574 (-)
LOC113527007 NA other downstream 586481 19980069 ~ 19980259 (-)
G101178 NA other downstream 2369934 18187447 ~ 18196806 (-)
tmem170a tmem170a,LOC106573739,LOC107596918 other downstream 5209177 15347166 ~ 15357563 (-)
dennd11 kiaa1147,LOC107738692,LOC107686315 other downstream 6219732 14335936 ~ 14347008 (-)
G102566 NA other upstream 381173 20953602 ~ 20966910 (-)
sertad3 sertad3 other upstream 422912 20995341 ~ 21013100 (-)
si LOC108264758,LOC108431149 other upstream 1659019 22231448 ~ 22306769 (-)
mmp23bb LOC108264351,LOC108440601,LOC107576217,LOC107758054,LOC107672246,LOC107670598,LOC107717605 other upstream 3018516 23590945 ~ 23610448 (-)
rnpepl1 rnpepl1,LOC107758061,LOC107671854,LOC107670589,LOC107602123,LOC107717622,LOC107575502 other upstream 3076255 23648684 ~ 23699707 (-)

Expression


Co-expression Network