G128939


Basic Information

Item Value
gene id G128939
gene name NA
gene type non-coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047602.1
NCBI id CM018548.1
chromosome length 30442583
location 7537645 ~ 7537854 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU152333
CGTCAGCCAGCGATGAGTCTGCCGGTGAGCTCGGAGCTCTGTTCCCTGGAGAGGGTCGCCCGCTACCGCAGCGCCTGCATCAATGGCTCTCCATATGCCATTAACAAGCCCATTGACATCAAGGGCCGAAGAAGATGGTAAAGATGACTTCTGCAAAGTAGAGTGGCACTGAGTGTCTTCAGCGCTAAATTACAGCTCACTGCTTTACTC

Function

GO: NA

KEGG:

id description
ko05322 Systemic lupus erythematosus
ko05034 Alcoholism

RNA

RNA id representative length rna type GC content exon number start site end site
TU152333 True 210 lncRNA 0.54 1 7537645 7537854

Neighbor

gene id symbol gene type direction distance location
si:dkey-190g11.3 LOC108265525 coding downstream 54876 7478754 ~ 7482769 (-)
plk2b plk2 coding downstream 65157 7466516 ~ 7472488 (-)
mier3b mier3b,LOC108265361,LOC108443009,LOC107710916,LOC107599834 coding downstream 98992 7427759 ~ 7438653 (-)
cenph cenph coding downstream 113758 7420876 ~ 7423887 (-)
dimt1l dimt1,LOC107699721 coding downstream 123347 7409655 ~ 7414298 (-)
LOC117597841 pde4d coding upstream 91839 7629693 ~ 7630540 (-)
elovl7a elovl7,LOC107743866,LOC107699661,LOC107657867,LOC107752445 coding upstream 125033 7662887 ~ 7673706 (-)
ercc8 ercc8,LOC107599804,LOC107752444 coding upstream 136410 7674264 ~ 7684557 (-)
pgm5 pgm5,LOC108265775,LOC108442998,LOC107724919,LOC107711872,LOC107600012,LOC107689271 coding upstream 162207 7700061 ~ 7723617 (-)
foxd5 LOC108265258 coding upstream 187227 7725081 ~ 7726430 (-)
G128902 NA non-coding downstream 44157 7492796 ~ 7493488 (-)
LOC113535317 NA non-coding downstream 87600 7447011 ~ 7450045 (-)
G128591 NA non-coding downstream 268992 7226366 ~ 7268653 (-)
G128571 NA non-coding downstream 310194 7179520 ~ 7227451 (-)
G128373 NA non-coding downstream 743779 6793460 ~ 6793866 (-)
G129019 NA non-coding upstream 243000 7780854 ~ 7782764 (-)
LOC117597801 NA non-coding upstream 253951 7791805 ~ 7793086 (-)
G129022 NA non-coding upstream 277655 7815509 ~ 7815745 (-)
G129023 NA non-coding upstream 278613 7816467 ~ 7817147 (-)
G129061 NA non-coding upstream 405301 7943155 ~ 7943782 (-)
ntng2a ntng2,ntng2a,LOC107557204,LOC107757289,LOC107674329,LOC107725312,LOC108438355,LOC107664998,LOC106585788 other downstream 547966 6922769 ~ 6989679 (-)
abt1 abt1 other downstream 2691865 4841421 ~ 4845780 (-)
cdk16 cdk16,LOC107674341,LOC107584883,LOC107601769,LOC107653433 other downstream 2723968 4774550 ~ 4813677 (-)
zgc:113363 LOC108265528 other downstream 3040750 4478075 ~ 4496895 (-)
gata1b LOC108266041 other downstream 3248906 4281917 ~ 4288739 (-)
smim15 smim15 other upstream 104361 7642215 ~ 7691454 (-)
G129009 LOC108265192 other upstream 239662 7777516 ~ 7796821 (-)
LOC117597796 LOC108265274 other upstream 290919 7828773 ~ 7842276 (-)
mad2l2 mad2l2 other upstream 304673 7842527 ~ 7856477 (-)
hyal3 LOC108265970 other upstream 421425 7959279 ~ 7967936 (-)

Expression


Co-expression Network