guk1b (kgua,guk1b,LOC108442369,LOC107585833,LOC107758268,LOC103024702,LOC107750510,LOC107657930)


Basic Information

Item Value
gene id guk1b
gene name kgua,guk1b,LOC108442369,LOC107585833,LOC107758268,LOC103024702,LOC107750510,LOC107657930
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047602.1
NCBI id CM018548.1
chromosome length 30442583
location 2030937 ~ 2040411 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026927941.2
GACTGTGTGGTTGTAATTAAGATGAGCAGTAAGTCtgagagttacacacacactacacctgCACAGCATCGACAAGaGAGATGCCAGGACCGAGGCCTGTAGTTCTGAGTGGCCCATCTGGAGCAGGGAAAAGCACTCTGCTCAAGAGGCTGATGCAGGAATATGAGGGAGTGTTCGGATTCAGTGTCTCCCATACAACCAGGAATCCTCGTCCTGGAGAAGAGAACGGAAAAGATTACCACTTCACCACACGGGAGAAGATGCAGGAGGGCATCAATAACGGCGATTTTATCGAGAACGCAGTGTTTTCAGGAAACATGTATGGCACCAGTAAGTCGGCCATAGAGGACGTTCAGGCCCAGAACCTGATCTGCATTCTGGACGTCGACCTTCAAGGGGTGAAAAAAATCAAGCAGACGGACTTGAACCCCATCTACATCTCCATCCAGCCTCCATCTATTGAGATCCTGGAGCAGCGTCtcagagacaggcagacagagacagaggaaagTCTACAGAAACGTCTGGAAGCAGCCCGTATTGACATGGAGCTCAgtAAAGAACCAGGCATCTTCGACATTGTCATCATTAATGATGATCAGGACAAAGCCTACGAGAAGCTTAAAAGTGCTCTTATTGAGGAAATTCAGAAGGTTCAGGATGCTAAAAAGTAAGAGAATGAAAAGAGCAATCTTGTCCTCTTGGGAACGGACATGGAGCCTTTCCTTCCAGCCTTCGAGCAACACAAATCTATTCACATTTCATTGATGAGAGAAACAATCAACACGGCACTGAAATAAACTTTTACAAAAAGTCTTTTCGACATACTACGTCATACGACAACCTGTCATGCTAACAATGCTGCTGAAAACCTTCAGTGTGAGTTTCACactttaacattatttacattattaatgtgaAACCACAGTCTTAAGCGTATGACTATATAATCATGGGTGCAGTTATTAGAGCAGCATTTTATTCTTGTATGTGTAAATATACAGACTACAAAAATATGGCTGGGTTATGATAATAACAATGCACTAGAATTTTGTGGAATTAGAGGTGCTACAGGATAAACCTCATTTAGTCTATcgatactgaaaataaatgtcttGAATGTGACTTGAATGtttatgt

Function

symbol description
guk1b Predicted to enable guanylate kinase activity. Predicted to act upstream of or within phosphorylation and purine nucleotide metabolic process. Predicted to be active in cytosol. Is expressed in epiphysis; retina; retinal outer nuclear layer; and retinal photoreceptor layer. Orthologous to human GUK1 (guanylate kinase 1).

NR:

description
PREDICTED: guanylate kinase-like isoform X1

GO:

id name namespace
GO:0006163 purine nucleotide metabolic process biological_process
GO:0046939 nucleotide phosphorylation biological_process
GO:0004385 guanylate kinase activity molecular_function

KEGG:

id description
K00942 E2.7.4.8, gmk; guanylate kinase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026927941.2 True 1140 mRNA 0.43 8 2030937 2040411

Neighbor

gene id symbol gene type direction distance location
armh1 NA coding downstream 1918 2018827 ~ 2029019 (-)
elovl8b LOC108442366,LOC103026255,LOC108265939,LOC107657928,LOC107585829 coding downstream 30340 1992544 ~ 2000597 (-)
ugt5e1 NA coding downstream 213518 1814277 ~ 1817419 (-)
tpk2 LOC108265462,LOC108411638,LOC107599057 coding downstream 259470 1764888 ~ 1771467 (-)
LOC113535232 cacna1e,LOC108265206,LOC107100995 coding downstream 581213 1344308 ~ 1449724 (-)
rnf220b NA coding upstream 1875 2042286 ~ 2096174 (-)
obscna LOC108265808 coding upstream 92964 2133375 ~ 2190545 (-)
zgc:153738 LOC108265810,LOC108442362 coding upstream 156922 2197333 ~ 2213683 (-)
mindy4 fam188b coding upstream 206284 2246695 ~ 2260320 (-)
nexn nexn coding upstream 221635 2262046 ~ 2282307 (-)
G126053 NA non-coding downstream 41856 1987652 ~ 1989081 (-)
G125941 NA non-coding downstream 217663 1811346 ~ 1813274 (-)
G125882 NA non-coding downstream 237620 1692099 ~ 1793317 (-)
G126112 NA non-coding upstream 225837 2266248 ~ 2278788 (-)
G126115 NA non-coding upstream 256629 2297040 ~ 2298436 (-)
G126131 NA non-coding upstream 325767 2366178 ~ 2368594 (-)
G126163 NA non-coding upstream 472204 2512615 ~ 2514070 (-)
G126183 NA non-coding upstream 580362 2620773 ~ 2628487 (-)
mutyh NA other downstream 13573 2003016 ~ 2017364 (-)
acbd6 NA other downstream 407708 1591970 ~ 1623229 (-)
si:dkey-21p1.3 LOC108265104 other downstream 691959 1298979 ~ 1338978 (-)
sap30bp sap30bp other downstream 1305052 705368 ~ 725885 (-)
itgb4 itgb4 other downstream 1333819 663353 ~ 697118 (-)
dmap1 dmap1,LOC107750524,LOC107699933,LOC107758267,LOC107548533,LOC107585836,LOC107657923 other upstream 77108 2117519 ~ 2132082 (-)
tmem47 tmem47,LOC107657933,LOC107585845,LOC107717575 other upstream 266448 2306859 ~ 2332046 (-)
sema6bb sema6b,LOC108413003 other upstream 466247 2506658 ~ 2587200 (-)
abhd17ab abhd17ab,LOC108265288,LOC108414914,LOC105895145,LOC107548688,LOC107750691 other upstream 632129 2672540 ~ 2692618 (-)
zgc:77486 LOC108265602,LOC108412670 other upstream 668686 2709097 ~ 2716443 (-)

Expression


Co-expression Network