Gene
RNA
| Item | Value |
|---|---|
| gene id | G177550 |
| gene name | NA |
| gene type | non-coding |
| species | striped catfish (Pangasianodon hypophthalmus) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_047605.1 |
| NCBI id | CM018551.1 |
| chromosome length | 26640196 |
| location | 7441891 ~ 7442395 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU210170 | True | 505 | lncRNA | 0.42 | 1 | 7441891 | 7442395 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| irf2bp2b | irf2bp2 | coding | downstream | 4401 | 7434319 ~ 7437490 (-) |
| strn | strn,LOC108271087,LOC108430145,LOC107702041,LOC107701064 | coding | downstream | 87561 | 7296707 ~ 7354330 (-) |
| cfap410 | c10h21orf2,cunh21orf2,LOC107713232,LOC107564578 | coding | downstream | 189298 | 7248348 ~ 7252593 (-) |
| si:dkey-93h22.8 | LOC108270890 | coding | downstream | 239027 | 7192255 ~ 7202864 (-) |
| ogal | LOC108270888,LOC108412751 | coding | downstream | 251057 | 7180208 ~ 7190834 (-) |
| rbm34 | rbm34 | coding | upstream | 50106 | 7492501 ~ 7500900 (-) |
| nid1a | nid1 | coding | upstream | 72852 | 7515247 ~ 7547820 (-) |
| ero1b | ero1b | coding | upstream | 121985 | 7564380 ~ 7577840 (-) |
| mctp2b | LOC108271124,LOC108428479 | coding | upstream | 152620 | 7595015 ~ 7623473 (-) |
| LOC113536417 | LOC108271125 | coding | upstream | 183101 | 7625496 ~ 7656954 (-) |
| G177547 | NA | non-coding | downstream | 1503 | 7440179 ~ 7440388 (-) |
| G177539 | NA | non-coding | downstream | 18615 | 7423023 ~ 7423276 (-) |
| LOC113536470 | NA | non-coding | downstream | 24853 | 7415941 ~ 7417038 (-) |
| G177491 | NA | non-coding | downstream | 27706 | 7413967 ~ 7414185 (-) |
| G177469 | NA | non-coding | downstream | 66656 | 7375027 ~ 7375235 (-) |
| G177559 | NA | non-coding | upstream | 28579 | 7470974 ~ 7471210 (-) |
| G177562 | NA | non-coding | upstream | 36763 | 7479158 ~ 7479388 (-) |
| G177682 | NA | non-coding | upstream | 66456 | 7508851 ~ 7509188 (-) |
| G177691 | NA | non-coding | upstream | 109127 | 7551522 ~ 7551750 (-) |
| G177729 | NA | non-coding | upstream | 265116 | 7707511 ~ 7755018 (-) |
| LOC113536608 | LOC108270551 | other | downstream | 580543 | 6856755 ~ 6861348 (-) |
| LOC113536561 | srsf7,LOC107665899,LOC107693014 | other | downstream | 1733587 | 5696380 ~ 5708304 (-) |
| trip4 | trip4 | other | downstream | 2245073 | 5139610 ~ 5196818 (-) |
| G176307 | NA | other | downstream | 2360996 | 5079817 ~ 5080895 (-) |
| lto1 | oraov1 | other | downstream | 2937562 | 4498946 ~ 4504329 (-) |
| si:dkey-56d12.4 | LOC108270721 | other | upstream | 38027 | 7480422 ~ 7484117 (-) |
| si:ch1073-365p7.2 | NA | other | upstream | 138039 | 7580434 ~ 7588815 (-) |
| igf1rb | LOC108271091 | other | upstream | 233521 | 7675916 ~ 7764430 (-) |
| trnar-ucg_7 | NA | other | upstream | 802254 | 8244649 ~ 8244721 (-) |
| trnar-acg_7 | NA | other | upstream | 804308 | 8246703 ~ 8246775 (-) |
