katnb1 (katnb1,LOC107596504,LOC108411466,LOC107753522)


Basic Information

Item Value
gene id katnb1
gene name katnb1,LOC107596504,LOC108411466,LOC107753522
gene type misc
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047605.1
NCBI id CM018551.1
chromosome length 26640196
location 24768928 ~ 24788894 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026947243.2
TCTTGGCGGAACGAATCAAGCACCGATACAGTGTTTCGAAGCAAcggttttatttttacacacgcCATGTTTGCAGCCATGTCCGCTGCTCAGTCTATACTGCTTTCCCCCGTTTTGTTGGCATTTCTACCGACACGCATCCGAGCGGAGTGAAGTCGTGCTTTCAGACGAGCATCCGAGCACAACAGCAACAAGTCTACTATAAGTTCCGTTTCAACTCACAAGACTCGAACAGCTGATTGGTCGCGTGTCTGTGGAGAGGAGCCAATCAGAAACGGGGTTATTGGGGAGGTTGCTGTTGTATTGACAATGGCAGTGTCCAATGTCAAGAAAATGTCATGGAAACTACAAGAAGTGGTGGCCCACCCAAGTAATGTGTCTTCACTGGTGTTGGGTAAATCATCAAGTCGCTTGCTGGCTACAGGAGGGGAGGACTGCAGAGTCAACATCTGGGCTGTCAACAAACCTAACTGCATTATGAGTTTGACAGGCCACACAAGCCCTGTGGAGTGTGTCCAGTTCAGTACCTCAGAGGAGCAGGTGGTAGCTGGCTCTCGGTCAGGCTCTCTGCGGGTCTGGGACTTGGAAGCTGCTAAAAtattTCGGACATTGATGGGTCACAAGGCTAATATCTGCAGTGTAGACTTTCACCCGTTTGGGGAATACTTGGCCTCTGGTTCCATGGATACTAATATTAAGTTATGGGATGTGAGGAGGAAAGGGTGTGTGTTCAAGTATAAGGGTCATACTCAAGCAGTGCGTTGTCTGGCCTTTAGCCCTGATGGAAAGTGGCTTGCTTCAGCCAGTGATGACAGCACAATTAAGCTTTGGGATTTAACGGCTGGGAAGATGATCTCAGAATTCACAGCACACACCTCAGCGGTTTCTGTTGTCCAGTTCCACCCAAATGAGTACCTTCTGGCTTCAGGGAGTGCTGACAGGACCATAAAGTTATGGGATCTGGAGAAATTCAAGATGATTGGCTCATCAGAGGGTGAAACATCTGGAAGgTGTGTGTTGTTCAGTCCTGATGGCAGCTGTTTATACAGTGGCTCGGACGACACACTGCGTGTGTATGGCTGGGAGCCAGACTGCTGCTTTGATGTAGTACACGTAGGCTGGGGCAAAGTGGTTGACTTTGCAATCTGTAGCAGTCAAATGATTGGAGTGTCGTGCAGCCAGACGAATGTGAGCTTGTATGTTGTGGATCTGGACCGAGTGAAGAAATCGGGAGCTGTCCAAGAACAAATTCAGGGTGGAAAGCCACTTGCCGCACCCATTCCTATAGGAGTAACACTAAGGCGGAACTATGAGCGTCCCACCACGTCGTGCAGCAGACAGAAAATGAAACAGAATGCAGATGGAGACAGATGTGTTGAGGGGGAGAGGCGTAGCCCTAGCAGCGAGGATGAGCGTGATGAGGAGAGCAAAGCAGAAATCACAAATCCAGATGACTATAAAGAGATCTTTCAGCCCCGCAATGCTATCTCGCGAACACCTCCCAAAAGGAATGAACCCTTCCCTGCACCACTTGTGGATGAAAGTTTCCAGGTGAAGCCCCACTTAGCAGAAGAAATCATTACTGCACTGCCTGATCATCTGAAGGCCCCCAATGCTTCCTCCACAGTAGTGACCACAGCTCCATCCCAGCCTGTTCCCGTGGTAACTACGTCAGTCTCAAGGCATGTTGTCACGACGTCCAAACCCAAACCCAGTTTAGGTGTTAGCCCCTCCACACTTATTGAGCCACTCAGCCTCATTTTTGGGGACATTTTACAACCTGGACTAAGTGGAAAGACCAGCGTCACAGCAGATGAAGAGGCATTGGTTCAGATCAGAAAAGGGCATGGCActatgtgtgtgatgttgactAGCAGACACAAAAACCTTGACACAGTACGGGCTCTCTGGGCTGGTGGCGACATCAAGATATCACTTGATTCTGCTATGTCCATGAATGATCTGTCCATTGTGGTGGACATCCTCAATATAATCAACCTTAAACCGTCACTTTGGAAACTAGACACCTGCATGTGCATCTTGCCCCAGCTTGAGGAGCTGCTACAGAGTAAATATGAAAGTTATGTGCAAACAGGATGCATGTCTTTGAAGTTAATTTTGAAGCGCTTTTGGCCATTAATCTCAGACACACTGACTGCTCCCCCATCTGTTGGAGTGGATATTACCCGAGAGGAGAGGCATCAGAAATGTAAGATGTGCTATAAGCAGCTGAAGAACCTCAGTAATGTAGTGAAGAACCGTGCGGAGCAAGTTGGTCGACATGGCAGTACTTTCAAAGAACTGCAGCTACTTATGGCCCCACTGGACTACTAAAACACAATCACTCTCCTTACTGCTTAATATCACACACAAAGATTGGTCTCAGTAAGCTCTTACTTGGCAAAGCACTCACCATGACATGATTGATGAGGAAGTCCCATGTATGGTCTGGTAAGCTGTATGAATAGACTATTAATAAATAGTCTATATAATGAATTATGTCATTAGGAAATATTAATTTACTGTGTATATTTACAAAACTGCTTTTGTTTGGTAGATGAATCTTTCTGTAATTCCTTTTATATAAAGAAcaagtatgtattttttttttcaaat
>XM_026947244.2
GTTATTGGGTAAGCGCGGAGTTGCCACAAACAAAGCAAGGCAATAAGTGAAGTTACCTGGACGAAATCAAATGATATTTGAATGTCCCCTTGACAGGACCCAGTTTAGTAATCCGGGAGGTTGCTGTTGTATTGACAATGGCAGTGTCCAATGTCAAGAAAATGTCATGGAAACTACAAGAAGTGGTGGCCCACCCAAGTAATGTGTCTTCACTGGTGTTGGGTAAATCATCAAGTCGCTTGCTGGCTACAGGAGGGGAGGACTGCAGAGTCAACATCTGGGCTGTCAACAAACCTAACTGCATTATGAGTTTGACAGGCCACACAAGCCCTGTGGAGTGTGTCCAGTTCAGTACCTCAGAGGAGCAGGTGGTAGCTGGCTCTCGGTCAGGCTCTCTGCGGGTCTGGGACTTGGAAGCTGCTAAAAtattTCGGACATTGATGGGTCACAAGGCTAATATCTGCAGTGTAGACTTTCACCCGTTTGGGGAATACTTGGCCTCTGGTTCCATGGATACTAATATTAAGTTATGGGATGTGAGGAGGAAAGGGTGTGTGTTCAAGTATAAGGGTCATACTCAAGCAGTGCGTTGTCTGGCCTTTAGCCCTGATGGAAAGTGGCTTGCTTCAGCCAGTGATGACAGCACAATTAAGCTTTGGGATTTAACGGCTGGGAAGATGATCTCAGAATTCACAGCACACACCTCAGCGGTTTCTGTTGTCCAGTTCCACCCAAATGAGTACCTTCTGGCTTCAGGGAGTGCTGACAGGACCATAAAGTTATGGGATCTGGAGAAATTCAAGATGATTGGCTCATCAGAGGGTGAAACATCTGGAAGgTGTGTGTTGTTCAGTCCTGATGGCAGCTGTTTATACAGTGGCTCGGACGACACACTGCGTGTGTATGGCTGGGAGCCAGACTGCTGCTTTGATGTAGTACACGTAGGCTGGGGCAAAGTGGTTGACTTTGCAATCTGTAGCAGTCAAATGATTGGAGTGTCGTGCAGCCAGACGAATGTGAGCTTGTATGTTGTGGATCTGGACCGAGTGAAGAAATCGGGAGCTGTCCAAGAACAAATTCAGGGTGGAAAGCCACTTGCCGCACCCATTCCTATAGGAGTAACACTAAGGCGGAACTATGAGCGTCCCACCACGTCGTGCAGCAGACAGAAAATGAAACAGAATGCAGATGGAGACAGATGTGTTGAGGGGGAGAGGCGTAGCCCTAGCAGCGAGGATGAGCGTGATGAGGAGAGCAAAGCAGAAATCACAAATCCAGATGACTATAAAGAGATCTTTCAGCCCCGCAATGCTATCTCGCGAACACCTCCCAAAAGGAATGAACCCTTCCCTGCACCACTTGTGGATGAAAGTTTCCAGGTGAAGCCCCACTTAGCAGAAGAAATCATTACTGCACTGCCTGATCATCTGAAGGCCCCCAATGCTTCCTCCACAGTAGTGACCACAGCTCCATCCCAGCCTGTTCCCGTGGTAACTACGTCAGTCTCAAGGCATGTTGTCACGACGTCCAAACCCAAACCCAGTTTAGGTGTTAGCCCCTCCACACTTATTGAGCCACTCAGCCTCATTTTTGGGGACATTTTACAACCTGGACTAAGTGGAAAGACCAGCGTCACAGCAGATGAAGAGGCATTGGTTCAGATCAGAAAAGGGCATGGCActatgtgtgtgatgttgactAGCAGACACAAAAACCTTGACACAGTACGGGCTCTCTGGGCTGGTGGCGACATCAAGATATCACTTGATTCTGCTATGTCCATGAATGATCTGTCCATTGTGGTGGACATCCTCAATATAATCAACCTTAAACCGTCACTTTGGAAACTAGACACCTGCATGTGCATCTTGCCCCAGCTTGAGGAGCTGCTACAGAGTAAATATGAAAGTTATGTGCAAACAGGATGCATGTCTTTGAAGTTAATTTTGAAGCGCTTTTGGCCATTAATCTCAGACACACTGACTGCTCCCCCATCTGTTGGAGTGGATATTACCCGAGAGGAGAGGCATCAGAAATGTAAGATGTGCTATAAGCAGCTGAAGAACCTCAGTAATGTAGTGAAGAACCGTGCGGAGCAAGTTGGTCGACATGGCAGTACTTTCAAAGAACTGCAGCTACTTATGGCCCCACTGGACTACTAAAACACAATCACTCTCCTTACTGCTTAATATCACACACAAAGATTGGTCTCAGTAAGCTCTTACTTGGCAAAGCACTCACCATGACATGATTGATGAGGAAGTCCCATGTATGGTCTGGTAAGCTGTATGAATAGACTATTAATAAATAGTCTATATAATGAATTATGTCATTAGGAAATATTAATTTACTGTGTATATTTACAAAACTGCTTTTGTTTGGTAGATGAATCTTTCTGTAATTCCTTTTATATAAAGAAcaagtatgtattttttttttcaaat
>XM_026947245.2
GGTCTTGGCGGAACGAATCAAGCACCGATACAGTGTTTCGAAGCAAcggttttatttttacacacgcCATGTTTGCAGCCATGTCCGCTGCTCAGTCTATACTGCTTTCCCCCGTTTTGTTGGCATTTCTACCGACACGCATCCGAGCGGAGTGAAGTCGTGCTTTCAGACGAGCATCCGAGCACAACAGCAACAAGTCTACTATAAGTTCCGTTTCAACTCACAAGACTCGAACAGCTGATTGGTCGCGTGTCTGTGGAGAGGAGCCAATCAGAAACGGGGTTATTGGGGAGGTTGCTGTTGTATTGACAATGGCAGTGTCCAATGTCAAGAAAATGTCATGGAAACTACAAGTGGTGGCCCACCCAAGTAATGTGTCTTCACTGGTGTTGGGTAAATCATCAAGTCGCTTGCTGGCTACAGGAGGGGAGGACTGCAGAGTCAACATCTGGGCTGTCAACAAACCTAACTGCATTATGAGTTTGACAGGCCACACAAGCCCTGTGGAGTGTGTCCAGTTCAGTACCTCAGAGGAGCAGGTGGTAGCTGGCTCTCGGTCAGGCTCTCTGCGGGTCTGGGACTTGGAAGCTGCTAAAAtattTCGGACATTGATGGGTCACAAGGCTAATATCTGCAGTGTAGACTTTCACCCGTTTGGGGAATACTTGGCCTCTGGTTCCATGGATACTAATATTAAGTTATGGGATGTGAGGAGGAAAGGGTGTGTGTTCAAGTATAAGGGTCATACTCAAGCAGTGCGTTGTCTGGCCTTTAGCCCTGATGGAAAGTGGCTTGCTTCAGCCAGTGATGACAGCACAATTAAGCTTTGGGATTTAACGGCTGGGAAGATGATCTCAGAATTCACAGCACACACCTCAGCGGTTTCTGTTGTCCAGTTCCACCCAAATGAGTACCTTCTGGCTTCAGGGAGTGCTGACAGGACCATAAAGTTATGGGATCTGGAGAAATTCAAGATGATTGGCTCATCAGAGGGTGAAACATCTGGAAGgTGTGTGTTGTTCAGTCCTGATGGCAGCTGTTTATACAGTGGCTCGGACGACACACTGCGTGTGTATGGCTGGGAGCCAGACTGCTGCTTTGATGTAGTACACGTAGGCTGGGGCAAAGTGGTTGACTTTGCAATCTGTAGCAGTCAAATGATTGGAGTGTCGTGCAGCCAGACGAATGTGAGCTTGTATGTTGTGGATCTGGACCGAGTGAAGAAATCGGGAGCTGTCCAAGAACAAATTCAGGGTGGAAAGCCACTTGCCGCACCCATTCCTATAGGAGTAACACTAAGGCGGAACTATGAGCGTCCCACCACGTCGTGCAGCAGACAGAAAATGAAACAGAATGCAGATGGAGACAGATGTGTTGAGGGGGAGAGGCGTAGCCCTAGCAGCGAGGATGAGCGTGATGAGGAGAGCAAAGCAGAAATCACAAATCCAGATGACTATAAAGAGATCTTTCAGCCCCGCAATGCTATCTCGCGAACACCTCCCAAAAGGAATGAACCCTTCCCTGCACCACTTGTGGATGAAAGTTTCCAGGTGAAGCCCCACTTAGCAGAAGAAATCATTACTGCACTGCCTGATCATCTGAAGGCCCCCAATGCTTCCTCCACAGTAGTGACCACAGCTCCATCCCAGCCTGTTCCCGTGGTAACTACGTCAGTCTCAAGGCATGTTGTCACGACGTCCAAACCCAAACCCAGTTTAGGTGTTAGCCCCTCCACACTTATTGAGCCACTCAGCCTCATTTTTGGGGACATTTTACAACCTGGACTAAGTGGAAAGACCAGCGTCACAGCAGATGAAGAGGCATTGGTTCAGATCAGAAAAGGGCATGGCActatgtgtgtgatgttgactAGCAGACACAAAAACCTTGACACAGTACGGGCTCTCTGGGCTGGTGGCGACATCAAGATATCACTTGATTCTGCTATGTCCATGAATGATCTGTCCATTGTGGTGGACATCCTCAATATAATCAACCTTAAACCGTCACTTTGGAAACTAGACACCTGCATGTGCATCTTGCCCCAGCTTGAGGAGCTGCTACAGAGTAAATATGAAAGTTATGTGCAAACAGGATGCATGTCTTTGAAGTTAATTTTGAAGCGCTTTTGGCCATTAATCTCAGACACACTGACTGCTCCCCCATCTGTTGGAGTGGATATTACCCGAGAGGAGAGGCATCAGAAATGTAAGATGTGCTATAAGCAGCTGAAGAACCTCAGTAATGTAGTGAAGAACCGTGCGGAGCAAGTTGGTCGACATGGCAGTACTTTCAAAGAACTGCAGCTACTTATGGCCCCACTGGACTACTAAAACACAATCACTCTCCTTACTGCTTAATATCACACACAAAGATTGGTCTCAGTAAGCTCTTACTTGGCAAAGCACTCACCATGACATGATTGATGAGGAAGTCCCATGTATGGTCTGGTAAGCTGTATGAATAGACTATTAATAAATAGTCTATATAATGAATTATGTCATTAGGAAATATTAATTTACTGTGTATATTTACAAAACTGCTTTTGTTTGGTAGATGAATCTTTCTGTAATTCCTTTTATATAAAGAAcaagtatgtattttttttttcaaat
>XM_026947246.2
GTTATTGGGTAAGCGCGGAGTTGCCACAAACAAAGCAAGGCAATAAGTGAAGTTACCTGGACGAAATCAAATGATATTTGAATGTCCCCTTGACAGGACCCAGTTTAGTAATCCGGGAGGTTGCTGTTGTATTGACAATGGCAGTGTCCAATGTCAAGAAAATGTCATGGAAACTACAAGTGGTGGCCCACCCAAGTAATGTGTCTTCACTGGTGTTGGGTAAATCATCAAGTCGCTTGCTGGCTACAGGAGGGGAGGACTGCAGAGTCAACATCTGGGCTGTCAACAAACCTAACTGCATTATGAGTTTGACAGGCCACACAAGCCCTGTGGAGTGTGTCCAGTTCAGTACCTCAGAGGAGCAGGTGGTAGCTGGCTCTCGGTCAGGCTCTCTGCGGGTCTGGGACTTGGAAGCTGCTAAAAtattTCGGACATTGATGGGTCACAAGGCTAATATCTGCAGTGTAGACTTTCACCCGTTTGGGGAATACTTGGCCTCTGGTTCCATGGATACTAATATTAAGTTATGGGATGTGAGGAGGAAAGGGTGTGTGTTCAAGTATAAGGGTCATACTCAAGCAGTGCGTTGTCTGGCCTTTAGCCCTGATGGAAAGTGGCTTGCTTCAGCCAGTGATGACAGCACAATTAAGCTTTGGGATTTAACGGCTGGGAAGATGATCTCAGAATTCACAGCACACACCTCAGCGGTTTCTGTTGTCCAGTTCCACCCAAATGAGTACCTTCTGGCTTCAGGGAGTGCTGACAGGACCATAAAGTTATGGGATCTGGAGAAATTCAAGATGATTGGCTCATCAGAGGGTGAAACATCTGGAAGgTGTGTGTTGTTCAGTCCTGATGGCAGCTGTTTATACAGTGGCTCGGACGACACACTGCGTGTGTATGGCTGGGAGCCAGACTGCTGCTTTGATGTAGTACACGTAGGCTGGGGCAAAGTGGTTGACTTTGCAATCTGTAGCAGTCAAATGATTGGAGTGTCGTGCAGCCAGACGAATGTGAGCTTGTATGTTGTGGATCTGGACCGAGTGAAGAAATCGGGAGCTGTCCAAGAACAAATTCAGGGTGGAAAGCCACTTGCCGCACCCATTCCTATAGGAGTAACACTAAGGCGGAACTATGAGCGTCCCACCACGTCGTGCAGCAGACAGAAAATGAAACAGAATGCAGATGGAGACAGATGTGTTGAGGGGGAGAGGCGTAGCCCTAGCAGCGAGGATGAGCGTGATGAGGAGAGCAAAGCAGAAATCACAAATCCAGATGACTATAAAGAGATCTTTCAGCCCCGCAATGCTATCTCGCGAACACCTCCCAAAAGGAATGAACCCTTCCCTGCACCACTTGTGGATGAAAGTTTCCAGGTGAAGCCCCACTTAGCAGAAGAAATCATTACTGCACTGCCTGATCATCTGAAGGCCCCCAATGCTTCCTCCACAGTAGTGACCACAGCTCCATCCCAGCCTGTTCCCGTGGTAACTACGTCAGTCTCAAGGCATGTTGTCACGACGTCCAAACCCAAACCCAGTTTAGGTGTTAGCCCCTCCACACTTATTGAGCCACTCAGCCTCATTTTTGGGGACATTTTACAACCTGGACTAAGTGGAAAGACCAGCGTCACAGCAGATGAAGAGGCATTGGTTCAGATCAGAAAAGGGCATGGCActatgtgtgtgatgttgactAGCAGACACAAAAACCTTGACACAGTACGGGCTCTCTGGGCTGGTGGCGACATCAAGATATCACTTGATTCTGCTATGTCCATGAATGATCTGTCCATTGTGGTGGACATCCTCAATATAATCAACCTTAAACCGTCACTTTGGAAACTAGACACCTGCATGTGCATCTTGCCCCAGCTTGAGGAGCTGCTACAGAGTAAATATGAAAGTTATGTGCAAACAGGATGCATGTCTTTGAAGTTAATTTTGAAGCGCTTTTGGCCATTAATCTCAGACACACTGACTGCTCCCCCATCTGTTGGAGTGGATATTACCCGAGAGGAGAGGCATCAGAAATGTAAGATGTGCTATAAGCAGCTGAAGAACCTCAGTAATGTAGTGAAGAACCGTGCGGAGCAAGTTGGTCGACATGGCAGTACTTTCAAAGAACTGCAGCTACTTATGGCCCCACTGGACTACTAAAACACAATCACTCTCCTTACTGCTTAATATCACACACAAAGATTGGTCTCAGTAAGCTCTTACTTGGCAAAGCACTCACCATGACATGATTGATGAGGAAGTCCCATGTATGGTCTGGTAAGCTGTATGAATAGACTATTAATAAATAGTCTATATAATGAATTATGTCATTAGGAAATATTAATTTACTGTGTATATTTACAAAACTGCTTTTGTTTGGTAGATGAATCTTTCTGTAATTCCTTTTATATAAAGAAcaagtatgtattttttttttcaaat
>XM_034308726.1
GTTATTGGGTAAGCGCGGAGTTGCCACAAACAAAGCAAGGCAATAAGTGAAGTTACCTGGACGAAATCAAATGATATTTGAATGTCCCCTTGACAGGACCCAGTTTAGTAATCCGGGAGGTTGCTGTTGTATTGACAATGGCAGTGTCCAATGTCAAGAAAATGTCATGGAAACTACAAGAAGTGGTGGCCCACCCAAGTAATGTGTCTTCACTGGTGTTGGGTAAATCATCAAGTCGCTTGCTGGCTACAGGAGGGGAGGACTGCAGAGTCAACATCTGGGCTGTCAACAAACCTAACTGCATTATGAGTTTGACAGGCCACACAAGCCCTGTGGAGTGTGTCCAGTTCAGTACCTCAGAGGAGCAGGTGGTAGCTGGCTCTCGGTCAGGCTCTCTGCGGGTCTGGGACTTGGAAGCTGCTAAAAtattTCGGACATTGATGGGTCACAAGGCTAATATCTGCAGTGTAGACTTTCACCCGTTTGGGGAATACTTGGCCTCTGGTTCCATGGATACTAATATTAAGTTATGGGATGTGAGGAGGAAAGGGTGTGTGTTCAAGTATAAGGGTCATACTCAAGCAGTGCGTTGTCTGGCCTTTAGCCCTGATGGAAAGTGGCTTGCTTCAGCCAGTGATGACAGCACAATTAAGCTTTGGGATTTAACGGCTGGGAAGATGATCTCAGAATTCACAGCACACACCTCAGCGGTTTCTGTTGTCCAGTTCCACCCAAATGAGTACCTTCTGGCTTCAGGGAGTGCTGACAGGACCATAAAGTTATGGGATCTGGAGAAATTCAAGATGATTGGCTCATCAGAGGGTGAAACATCTGGAAGgTGTGTGTTGTTCAGTCCTGATGGCAGCTGTTTATACAGTGGCTCGGACGACACACTGCGTGTGTATGGCTGGGAGCCAGACTGCTGCTTTGATGTAGTACACGTAGGCTGGGGCAAAGTGGTTGACTTTGCAATCTGTAGCAGTCAAATGATTGGAGTGTCGTGCAGCCAGACGAATGTGAGCTTGTATGTTGTGGATCTGGACCGAGTGAAGAAATCGGGAGCTGTCCAAGAACAAATTCAGGGTGGAAAGCCACTTGCCGCACCCATTCCTATAGGAGTAACACTAAGGCGGAACTATGAGCGTCCCACCACGTCGTGCAGCAGACAGAAAATGAAACAGAATGCAGATGGAGACAGATGTGTTGAGGGGGAGAGGCGTAGCCCTAGCAGCGAGGATGAGCGTGATGAGGAGAGCAAAGCAGAAATCACAAATCCAGATGACTATAAAGAGATCTTTCAGCCCCGCAATGCTATCTCGCGAACACCTCCCAAAAGGAATGAACCCTTCCCTGCACCACTTGTGGATGAAAGTTTCCAGGTGAAGCCCCACTTAGCAGAAGAAATCATTACTGCACTGCCTGATCATCTGAAGGCCCCCAATGCTTCCTCCACAGTAGTGACCACAGCTCCATCCCAGCCTGTTCCCGTGGTAACTACGTCAGTCTCAAGGCATGTTGTCACGACGTCCAAACCCAAACCCAGTTTAGGTGTTAGCCCCTCCACACTTATTGAGCCACTCAGCCTCATTTTTGGGGACATTTTACAACCTGGACTAAGTGGAAAGACCAGCGTCACAGCAGATGAAGAGGCATTGGTTCAGATCAGAAAAGGGCATGGCActatgtgtgtgatgttgactAGCAGACACAAAAACCTTGACACAGTACGGGCTCTCTGGGCTGGTGGCGACATCAAGATATCACTTGATTCTGCTATGTCCATGAATGATCTGTCCATTGTGGTGGACATCCTCAATATAATCAACCTTAAACCGTCCCTAGAGGTTCCTAGAGGGTCCACAACCATCACAGTCTTATCCAGTATGGTAAAGGGAGGCAGTGCTGATTCTCCTGGGCACTTCTTCTCTTGTGGACTTTCCATTTCAgttcaccccacagattttcaattttCATGTCAACTGCTTGAGTCTCTGATTATAGAACCatttttgtgtacatttatacatttggaCCTGCTGGAAGGTCCAAACATGACCCAGGTGTAGCTTCTTGGCTGTCacacagattttaattttaaatctgCTCGTACTTCATGGAGTCCATTGTGCCATgatgtttttaagaaaaaacagCCCCACATGACAGCTTGTTCTGCATACTACTTTAGTGTATAACTGTTCTTCTTTTTATGCCAAACCGACCTTAAGTGTTTCTTTCCAAAAAGCTCATCTGACCACAGAATGCTTTTTCTAGTCAAAGTTACAGTAGCATCTAGCATTTTTCCAAACCGGTCTAGGGTCAGGCCATAACataaaaagaaggagaaagatcAGAGCCCCTCTGGTTCCCAAAATTTCACTGAGAACCACAGAACAaagctgttccagcatgacattgTCCCtgagcacaaagtgaggtccatatgCCCACtgcttgtgcagtggctctggttt
>XR_004579083.1
GTTATTGGGTAAGCGCGGAGTTGCCACAAACAAAGCAAGGCAATAAGTGAAGTTACCTGGACGAAATCAAATGATATTTGAATGTCCCCTTGACAGGACCCAGTTTAGTAATCCGGGAGGTTGCTGTTGTATTGACAATGGCAGTGTCCAATGTCAAGAAAATGTCATGGAAACTACAAGAAGTGGTGGCCCACCCAAGTAATGTGTCTTCACTGGTGTTGGGTAAATCATCAAGTCGCTTGCTGGCTACAGGAGGGGAGGACTGCAGAGTCAACATCTGGGCTGTCAACAAACCTAACTGCATTATGAGTTTGACAGGCCACACAAGCCCTGTGGAGTGTGTCCAGTTCAGTACCTCAGAGGAGCAGGTGGTAGCTGGCTCTCGGTCAGGCTCTCTGCGGGTCTGGGACTTGGAAGCTGCTAAAAtattTCGGACATTGATGGGTCACAAGGCTAATATCTGCAGTGTAGACTTTCACCCGTTTGGGGAATACTTGGCCTCTGGTTCCATGGATACTAATATTAAGTTATGGGATGTGAGGAGGAAAGGGTGTGTGTTCAAGTATAAGGGTCATACTCAAGCAGTGCGTTGTCTGGCCTTTAGCCCTGATGGAAAGTGGCTTGCTTCAGCCAGTGATGACAGCACAATTAAGCTTTGGGATTTAACGGCTGGGAAGATGATCTCAGAATTCACAGCACACACCTCAGCGGTTTCTGTTGTCCAGTTCCACCCAAATGAGTACCTTCTGGCTTCAGGGAGTGCTGACAGGACCATAAAGTTATGGGATCTGGAGAAATTCAAGATGATTGGCTCATCAGAGGGTGAAACATCTGGAAGgTGTGTGTTGTTCAGTCCTGATGGCAGCTGTTTATACAGTGGCTCGGACGACACACTGCGTGTGTATGGCTGGGAGCCAGACTGCTGCTTTGATGTAGTACACGTAGGCTGGGGCAAAGTGGTTGACTTTGCAATCTGTAGCAGTCAAATGATTGGAGTGTCGTGCAGCCAGACGAATGTGAGCTTGTATGTTGTGGATCTGGACCGAGTGAAGAAATCGGGAGCTGTCCAAGAACAAATTCAGGGTGGAAAGCCACTTGCCGCACCCATTCCTATAGGAGTAACACTAAGGCGGAACTATGAGCGTCCCACCACGTCGTGCAGCAGACAGAAAATGAAACAGAATGCAGATGGAGACAGATGTGTTGAGGGGGAGAGGCGTAGCCCTAGCAGCGAGGATGAGCGTGATGAGGAGAGCAAAGCAGAAATCACAAATCCAGATGACTATAAAGAGATCTTTCAGCCCCGCAATGCTATCTCGCGAACACCTCCCAAAAGGAATGAACCCTTCCCTGCACCACTTGTGGATGAAAGTTTCCAGGTGAAGCCCCACTTAGCAGAAGAAATCATTACTGCACTGCCTGATCATCTGAAGGCCCCCAATGCTTCCTCCACAGTAGTGACCACAGCTCCATCCCAGCCTGTTCCCGTGGTAACTACGTCAGTCTCAAGGCATGTTGTCACGACGTCCAAACCCAAACCCAGTTTAGGTGTTAGCCCCTCCACACTTATTGAGCCACTCAGCCTCATTTTTGGGGACATTTTACAACCTGGACTAAGTGGAAAGACCAGCGTCACAGCAGATGAAGAGGCATTGGTTCAGATCAGAAAAGGGCATGGCActatgtgtgtgatgttgactAGCAGACACAAAAACCTTGACACAGTACGGGCTCTCTGGGCTGGTGGCGACATCAAGATATCACTTGATTCTGCTATGTCCATGAATGATCTGTCCATTGTGGTGGACATCCTCAATATAATCAACCTTAAACCGTCCCTAGAGGTTCCTAGAGGGTCCACAACCATCACAGTCTTATCCAGTATGGTAAAGGGAGGCAGTGCTGGTCACTTTGGAAACTAGACACCTGCATGTGCATCTTGCCCCAGCTTGAGGAGCTGCTACAGAGTAAATATGAAAGTTATGTGCAAACAGGATGCATGTCTTTGAAGTTAATTTTGAAGCGCTTTTGGCCATTAATCTCAGACACACTGACTGCTCCCCCATCTGTTGGAGTGGATATTACCCGAGAGGAGAG

Function

symbol description
katnb1 Predicted to enable microtubule binding activity. Acts upstream of or within midbrain development. Predicted to be located in cytoplasm and spindle pole. Predicted to be part of katanin complex. Is expressed in brain and pectoral fin. Human ortholog(s) of this gene implicated in lissencephaly 6. Orthologous to human KATNB1 (katanin regulatory subunit B1).

NR:

description
PREDICTED: katanin p80 WD40 repeat-containing subunit B1 isoform X1

GO:

id name namespace
GO:0007049 cell cycle biological_process
GO:0051013 microtubule severing biological_process
GO:0051301 cell division biological_process
GO:0005813 centrosome cellular_component
GO:0005815 microtubule organizing center cellular_component
GO:0000922 spindle pole cellular_component
GO:0005874 microtubule cellular_component
GO:0008352 katanin complex cellular_component
GO:0005737 cytoplasm cellular_component
GO:0008017 microtubule binding molecular_function

KEGG:

id description
K18643 KATNB1; katanin p80 WD40 repeat-containing subunit B1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026947243.2 True 2616 mRNA 0.47 20 24768928 24788892
XM_026947244.2 False 2444 mRNA 0.46 20 24768928 24788613
XM_026947245.2 False 2615 mRNA 0.47 20 24768928 24788894
XM_026947246.2 False 2441 mRNA 0.46 20 24768928 24788613
XM_034308726.1 False 2474 mRNA 0.47 19 24771833 24788613
XR_004579083.1 False 2097 misc_RNA 0.48 20 24769474 24788613

Neighbor

gene id symbol gene type direction distance location
rex1bd c10h19orf60,clg08h19orf60,cssa23h19orf60,LOC108439285,LOC103025814,LOC107729673,LOC107676986,LOC107593355 coding downstream 29632 24731213 ~ 24739296 (-)
shc2 shc2,LOC108439270,LOC107586398,LOC107729700 coding downstream 44636 24705448 ~ 24724292 (-)
fkbp8 fkbp8,LOC107719572,LOC107676977,LOC107699404,LOC107586436 coding downstream 122157 24632731 ~ 24646771 (-)
ell ell coding downstream 138482 24591064 ~ 24630446 (-)
org LOC108270831 coding downstream 192296 24574587 ~ 24576632 (-)
tmem208 tmem208,LOC107707912 coding upstream 7868 24796762 ~ 24809792 (-)
LOC113523940 anx2a,LOC108441849,LOC107750515,LOC107674461,LOC107586047,LOC108433632 coding upstream 319801 25108695 ~ 25121891 (-)
elp4 elp4 coding upstream 342687 25131581 ~ 25158443 (-)
dbx1a dbx1 coding upstream 541733 25330627 ~ 25377213 (-)
LOC117598403 LOC107573283,LOC107726143,LOC107566952 coding upstream 710853 25499747 ~ 25500841 (-)
G187391 NA non-coding downstream 96797 24671926 ~ 24672131 (-)
G187381 NA non-coding downstream 157233 24610335 ~ 24611695 (-)
G187350 NA non-coding downstream 216596 24525684 ~ 24552332 (-)
G187355 NA non-coding downstream 219209 24546588 ~ 24549719 (-)
LOC117598417 NA non-coding downstream 344433 24417081 ~ 24424495 (-)
G187500 NA non-coding upstream 141940 24930834 ~ 24931392 (-)
G187501 NA non-coding upstream 143448 24932342 ~ 24932582 (-)
G187506 NA non-coding upstream 150318 24939212 ~ 24939561 (-)
G187554 NA non-coding upstream 316139 25105033 ~ 25105257 (-)
G187610 NA non-coding upstream 385403 25174297 ~ 25174581 (-)
lingo3a lingo3,lingo3a,LOC108270778,LOC108438765,LOC107596880,LOC107655199,LOC107719577 other downstream 265560 24484772 ~ 24503368 (-)
c11h1orf53 NA other downstream 940837 23816527 ~ 23828091 (-)
ptprc NA other downstream 1084917 23652850 ~ 23684011 (-)
LOC117598437 LOC108191637,LOC107104758 other downstream 2772773 21995148 ~ 21996155 (-)
cntnap5l LOC108270728,LOC108439930 other downstream 2873522 21799146 ~ 21895406 (-)
G187530 NA other upstream 200099 24988993 ~ 24989258 (-)
G187532 NA other upstream 201503 24990397 ~ 24991260 (-)
gtf2a2 gtf2a2,LOC106531147 other upstream 312226 25101120 ~ 25103731 (-)
lrp4 lrp4,LOC106587054 other upstream 957799 25746693 ~ 25813453 (-)
LOC113523927 LOC108271167 other upstream 1184262 25973156 ~ 26012014 (-)

Expression


Co-expression Network