manbal (manbal)


Basic Information

Item Value
gene id manbal
gene name manbal
gene type misc
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047596.1
NCBI id CM018542.1
chromosome length 35203048
location 9938365 ~ 9941187 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU28891
gtgaaagTCAGCTTTGACAACGTCAACTATTTTCGTTACACCGGATGTTAAACCATAAATACGGTATTCGGAAGTGTCTTGGATAcgaaataattcatttattcaGTACAGATCAGCGCCATGTCTGGGGATTTGGATCTCTCGCCGCCGGAGGTTCCTGAGCCCACCTTTTTCGAGAGTGTTTTACGCTATGGCCTCTTTCTTGGAGCAATTTTCCAACTCGTCTGCATTTTAGCCATAATCATACCCACCTCCAAGAGCCACGAACAGGAAGAGCCTTCAGAGACAGCTGAGCCGAAAACCACTGAGCCGAGCAGAAAGCCCAAAGCACCTGCACAGCAAAACCGgcaaaaactaaaaaaggaGAGCAAGAAGAAAAGATAAGACtctgtgactgagtgtgtgagcaaATATGaaagtttgtttctgttttatgacaaaaaacacaactgaaGGAACTCAAACGGTGGAAATTTTCATCATGGACCATCCAATCTAAACACTAAACCCATCCTGAAACTGCAAATACTTTATTTACGGCAGTAGATCTACAACAGTgatcatatttacaatatatacttCACTCATTCACTAGATTACTGTCATAAGGCTGGTGGTTAAAACTTAAATTTGtatcaacacattttaaacaatcatttttgtAAGTCTGTTGTATCTCTATAATAAACTGGACTGTTTTGGACC
>XM_026920222.2
GCATGCGCAAACCTCCGCGCAtgcgtgtttgtgtgaaagTCAGCTTTGACAACGTCAACTATTTTCGTTACACCGGATGTTAAACCATAAATACGGTATTCGGAAGTGTCTTGGATAcgaaataattcatttattcaGTACAGATCAGCGCCATGTCTGGGGATTTGGATCTCTCGCCGCCGGAGGTTCCTGAGCCCACCTTTTTCGAGAGTGTTTTACGCTATGGCCTCTTTCTTGGAGCAATTTTCCAACTCGTCTGCATTTTAGCCATAATCATACCCACCTCCAAGAGCCACGAACAGGAAGAGCCTTCAGAGACAGCTGAGCCGAAAACCACTGAGCCGAGCAGAAAGCCCAAAGCACCTGCACAGCAAAACCGgcaaaaactaaaaaaggaGAGCAAGAAGAAAAGATAAGACtctgtgactgagtgtgtgagcaaATATGaaagtttgtttctgttttatgacaaaaaacacaactgaaGGAACTCAAACGGTGGAAATTTTCATCATGGACCATCCAATCTAAACACTAAACCCATCCTGAAACTGCAAATACTTTATTTACGGCAGTAGATCTACAACAGTgatcatatttacaatatatacttCACTCATTCACTAGATTACTGTCATAAGGCTGGTGGTTAAAACTTAAATTTGtatcaacacattttaaacaatcatttttgtAAGTCTGTTGTATCTCTATAATAAACTGGACTGTTTTGGACCGTTC
>XM_026920232.2
caaatgaaaatgatagTAATGATGAGTTATTTCACGCTGGTGTGCAGCTTGCACTTGTACTACTGACTAGATAACAGGGCTGATAAAGCTGTGGGTCCAGAGCCACACTGTACAGCACTGAGTAGAAGGTACAGATCAGCGCCATGTCTGGGGATTTGGATCTCTCGCCGCCGGAGGTTCCTGAGCCCACCTTTTTCGAGAGTGTTTTACGCTATGGCCTCTTTCTTGGAGCAATTTTCCAACTCGTCTGCATTTTAGCCATAATCATACCCACCTCCAAGAGCCACGAACAGGAAGAGCCTTCAGAGACAGCTGAGCCGAAAACCACTGAGCCGAGCAGAAAGCCCAAAGCACCTGCACAGCAAAACCGgcaaaaactaaaaaaggaGAGCAAGAAGAAAAGATAAGACtctgtgactgagtgtgtgagcaaATATGaaagtttgtttctgttttatgacaaaaaacacaactgaaGGAACTCAAACGGTGGAAATTTTCATCATGGACCATCCAATCTAAACACTAAACCCATCCTGAAACTGCAAATACTTTATTTACGGCAGTAGATCTACAACAGTgatcatatttacaatatatacttCACTCATTCACTAGATTACTGTCATAAGGCTGGTGGTTAAAACTTAAATTTGtatcaacacattttaaacaatcatttttgtAAGTCTGTTGTATCTCTATAATAAACTGGACTGTTTTGGACCGTTC
>XM_026920240.2
tgtgaaagTCAGCTTTGACAACGTCAACTATTTTCGTTACACCGGATGTTAAACCATAAATACGGTATTCGGAAGTGTCTTGGGTACAGATCAGCGCCATGTCTGGGGATTTGGATCTCTCGCCGCCGGAGGTTCCTGAGCCCACCTTTTTCGAGAGTGTTTTACGCTATGGCCTCTTTCTTGGAGCAATTTTCCAACTCGTCTGCATTTTAGCCATAATCATACCCACCTCCAAGAGCCACGAACAGGAAGAGCCTTCAGAGACAGCTGAGCCGAAAACCACTGAGCCGAGCAGAAAGCCCAAAGCACCTGCACAGCAAAACCGgcaaaaactaaaaaaggaGAGCAAGAAGAAAAGATAAGACtctgtgactgagtgtgtgagcaaATATGaaagtttgtttctgttttatgacaaaaaacacaactgaaGGAACTCAAACGGTGGAAATTTTCATCATGGACCATCCAATCTAAACACTAAACCCATCCTGAAACTGCAAATACTTTATTTACGGCAGTAGATCTACAACAGTgatcatatttacaatatatacttCACTCATTCACTAGATTACTGTCATAAGGCTGGTGGTTAAAACTTAAATTTGtatcaacacattttaaacaatcatttttgtAAGTCTGTTGTATCTCTATAATAAACTGGACTGTTTTGGACCGTTC
>XM_034310659.1
GTCCAGAGCCACACTGTACAGCACTGAGTAGAAGGTCAGGGTCCCTAACAGGGTACAGATCAGCGCCATGTCTGGGGATTTGGATCTCTCGCCGCCGGAGGTTCCTGAGCCCACCTTTTTCGAGAGTGTTTTACGCTATGGCCTCTTTCTTGGAGCAATTTTCCAACTCGTCTGCATTTTAGCCATAATCATACCCACCTCCAAGAGCCACGAACAGGAAGAGCCTTCAGAGACAGCTGAGCCGAAAACCACTGAGCCGAGCAGAAAGCCCAAAGCACCTGCACAGCAAAACCGgcaaaaactaaaaaaggaGAGCAAGAAGAAAAGATAAGACtctgtgactgagtgtgtgagcaaATATGaaagtttgtttctgttttatgacaaaaaacacaactgaaGGAACTCAAACGGTGGAAATTTTCATCATGGACCATCCAATCTAAACACTAAACCCATCCTGAAACTGCAAATACTTTATTTACGGCAGTAGATCTACAACAGTgatcatatttacaatatatacttCACTCATTCACTAGATTACTGTCATAAGGCTGGTGGTTAAAACTTAAATTTGtatcaacacattttaaacaatcatttttgtAAGTCTGTTGTATCTCTATAATAAACTGGACTGTTTTGGACCGTTC

Function

symbol description
manbal Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human MANBAL (mannosidase beta like).

NR:

description
MANBAL

GO:

id name namespace
GO:0016021 integral component of membrane cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU28891 False 705 lncRNA 0.40 3 9938397 9941183
XM_026920222.2 True 741 mRNA 0.41 3 9938365 9941187
XM_026920232.2 False 732 mRNA 0.41 3 9938551 9941187
XM_026920240.2 False 687 mRNA 0.41 3 9938396 9941187
XM_034310659.1 False 656 mRNA 0.42 3 9938645 9941187

Neighbor

gene id symbol gene type direction distance location
mybphb mybph,LOC107696393,LOC108441582,LOC107587590,LOC107740275,LOC107744364 coding upstream 70090 9855971 ~ 9868275 (+)
nav1b nav1 coding upstream 82824 9788663 ~ 9855541 (+)
pkp1b pkp1 coding upstream 226527 9694499 ~ 9711838 (+)
smpd2b LOC108271873 coding upstream 245399 9682331 ~ 9692966 (+)
tead3b tead3,LOC108441590,LOC107665997,LOC105907572 coding upstream 265720 9639105 ~ 9672645 (+)
LOC113536587 LOC108271763,LOC108410937,LOC107666076,LOC107740256,LOC797048,LOC107696440,LOC107587593 coding downstream 22786 9963973 ~ 9974363 (+)
zgc:109913 LOC108271762 coding downstream 34255 9975442 ~ 9978699 (+)
pltp pltp coding downstream 70348 10011535 ~ 10025366 (+)
ncoa5 ncoa5 coding downstream 93446 10034633 ~ 10044782 (+)
nat8l2 LOC108271756 coding downstream 262387 10203574 ~ 10208434 (+)
G24289 NA non-coding upstream 168864 9769288 ~ 9769501 (+)
G24283 NA non-coding upstream 179399 9758585 ~ 9758966 (+)
LOC113534952 NA non-coding upstream 198914 9738017 ~ 9739451 (+)
G24183 NA non-coding upstream 268974 9658633 ~ 9669391 (+)
G24178 NA non-coding upstream 322902 9613112 ~ 9615463 (+)
G24390 NA non-coding downstream 52375 9993562 ~ 9995992 (+)
LOC117599366 NA non-coding downstream 64350 10005537 ~ 10010607 (+)
G24463 NA non-coding downstream 201822 10143009 ~ 10143237 (+)
G24476 NA non-coding downstream 210575 10151762 ~ 10152208 (+)
G24494 NA non-coding downstream 239056 10180243 ~ 10180482 (+)
LOC113530691 LOC108410934,LOC108272263,LOC107696444,LOC107587591,LOC107744363 other upstream 15200 9874708 ~ 9923165 (+)
LOC113532547 LOC108271588 other upstream 334859 9591941 ~ 9603506 (+)
hmga1b NA other upstream 483903 9450925 ~ 9454462 (+)
cysltr3 LOC108271499 other upstream 933424 8996934 ~ 9004941 (+)
lrrn1 lrrn1,LOC107713505,LOC107667032,LOC107584468,LOC107680720 other upstream 1499024 8407805 ~ 8439341 (+)
G24500 NA other downstream 256779 10197966 ~ 10198455 (+)
G25029 NA other downstream 965013 10906200 ~ 10908572 (+)
si:dkeyp-67f1.2 fam3d,LOC108272267 other downstream 2263254 12204441 ~ 12213657 (+)
G25908 LOC108272198 other downstream 2584983 12526170 ~ 12527491 (+)
si:ch211-286o17.1 NA other downstream 2787806 12728993 ~ 12751277 (+)

Expression


Co-expression Network