iqca1 (iqca1,LOC108437680)


Basic Information

Item Value
gene id iqca1
gene name iqca1,LOC108437680
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047596.1
NCBI id CM018542.1
chromosome length 35203048
location 26430072 ~ 26481633 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026933141.2
GTGTATTAAAGTATAGGCAGATTACAAGAATTTACAAGTTACAAAGAAGTGACAAATTGAGTTTGATAATCTCAAAACTAAACAGCGTGGGGAAAATGTGGAATACAGTTCCAGGGTCTTTAGCCTGTGAACCTCGTAGCTGATTTGAATACAAAGAGCAAACGGGCTGCGCGAGCGTACAGCACAGCTTGCCTTGCTAACAGAAGATTTACCGCTTTAACTTCACTTCgcgtttctttttttatcccTCGATAAGATAAGATGATCCGAAAATGTCTTAAAAGATAACCCCTTTGATTACGGCGCCGTTGTGGTACATAATTTAATGAGTATTGTCTTCTGTTTTCAAGCAGCTCTGTTTAGCTGAGCGCATTCTGTGCTAAGCGCGTCTCCAGCTGAGCGCGCGCTCACATTCTGCACACTTTGATCTCGTCGCCATGGCAGCGGCGCGAGGCGTCGAGCAAACTACCCGGGGCGCGAGGAAGGAGAAATTCATGTTTCGGAGTTCAGTGTGGAAATATATGTTGAGATTATTCGCACAGACTCACACTGAAGCGCACAGACTTGTGGAAAAGTGAAGTGATCACAGTGAAGGATGTCACACAGGTCTTATGGCAGAATGTGGGCAGATGCCCAGGGGGCCTTGCAGGATCTACTGCAAGAAGAGATGCCCCCGTTGCTGCCCTGTCCACAGAAGGATCGTTTTCAGGTCTTTCAGACTTTGGCCACTTTCTACCTGCGCTACCTCCAGATCTTCCGGGGTCTGGAGGCAGCCTATGACCAGATCGTTCATCCCCAGAAGAGACATGTGGTACGCCACGTCCTGGAAGGAGTCATGGGGAGATTGGTGGAGCTGAAGAACGAGATGGTAGAATTAGAGTTCTCTGAGTTTCACTATTTTGACGACGTCCTACAGGACCTGAAGATGACACCTGAGGACTTGGAGGTTCCCATCCCACGCTATTTTGTGAGGGAAAGGATGAAAgcactgaaagaaagagagaaaatcctGGCTCATATTCTGGCTAAAAAGGCTAACATAGAACAGGAACCTGTTGCGGTACACAGTATGACAGTGGAGAGGGCAGTGCTATTGCTGCAGGTGAGTGAACGTGCGCGGCAGGGACGCCTCAGAGCTCGTTTTATGAAGGAGATCCGAGATGAGGAGAGGAAAAACCAGCATCAAGTGATCAACAGCACACTGGATCCCCATCTCTCAGCCACTCTCATACAGAAGACATGGCGGGGTTACTGGCAGAGGAAGAGGACCAAGAAAGATCGTCTGGAGGAAATGATATTTTTGGGAATGATAGACCCCAAACTCCCAACACCCAGTCCTGCTCAGCAGCGAGCAAAGCATGTAGAAAGCAGCAGGCATCAGATGCAGGAGCGGCATGAAGCAGAATACCAGCAGGCCCTGATCACCATCAAGGAGTCTGTTCGCTTGGTAGACGGACCTGACATAAAGGAAACACTCCAGGACCAGATACGCCAATGGTTCCTCGAATGCCGAGATGCCACCGGAAAGTTTCCTGATTTCCCAAGCAGTGAGGATGGAGGATCAGCTTCCATATTTGCACAGAAGACGCCAGAGGAGGTTGCTGCTGAGCTAGCCGCTAAACAacaagagaaggagaagaagtcCAAGGggaagaaagacaaaaatgctgtaaaggacaaaaagaaagacaagaagGGGAAGACTAAAAGCAAAGGCGAGAAAGCTGATACAGCGgaggaggaggagggatggAAGATGAGCCCCAGTAACTTTCTGCCAACTGTGGTTGAAGGAGCTAAGATATACAGAGAGGTTTGGCAGGCCCGAGACGAGGGCCAGAACTTCCACCAGCGTTTTGATCCTGAGCTGGTGCGAGAGGAGAAGAGAATGGAGGTAGAAGGGGAGGTCAGAGTTCAGGTAGATGAGCTAATGAGACAGGAACTGAAGAATCTCAAACTGGTAGTGGACCGGGACAAGGgcaacaagaagaaaaaagggaaaaagtcTAATAAAAAGaagaaaaagaaagcaaaaaagagtggaaagaagaagaagaagaaagagaaagatctTACAGCAGACAGGACCATTGAATCAATATACGAGGAGCTCGTTCTGGAAGGCATCCTGATGCAACCGATGACCGTAAAATTATGTGATTACCTCGgGGAATACAGTTACCTGGGTACGAGCCTGAGGCAGGCAGACATTGAGCCCATGCCATCCCTCTCAGACGTCAGACAGCTCATTGCTCTGTATGGCGTGCTGCCTCTGGGCTCTCAGTGTGTACATGAGAGAGGACCCCTAATCCGATCAGTGCTGCTGGCCGGTCCATCAGGCGTGGGTAAAAGGATGCTGCTCCATGCCCTGTGCACCGAGACTGGGGCCAATCTGTTCAACCTCTCCCCTGCCAACCTGGCAGGCAAATACCCAGGCAGGAGTGGCCTCCAGTACCTCCTGCATATGGTCTTGAAGGTGGCTCGCCAGCTGCAGCCCTCTGTCATCTGGATCGGAGACGCTGAGAAAACATTCTACAAAAAAGTCCCAAAACCAGAGAAAGAGATGGAACCCAAAAGGCTGAAGAAAGACCTGCCAAAAGTGGTAAAGTCCATTAAAGCAGAGGATCGTGTGCTGCTGGTTGGGACATCTCGCAGACCTTTCGACGCAGATCTCAAAGCATTGTGTAAAGTTTACAAAAAGATCATCCTGATTCCCAGACCAGACTATGCTTCAAGACTGAatctaTGGAAAGAGCTGCTCAGGGTGAGAGGTGTTCAGTTCAGCCCCTCTCTGGACCTCAGCTCCTTGGCTAAAGTCACAGACGGCTACACTCAGGGTCACATCCTGCAGGCTGTGCGGAGTGTCTTGACCTCTCAACGCCTCAGTCGGCAAACCAAGAAACCCCTCACTGCGCTGGAGTTTATCCCTCCTCTTGCCAGACAAGACCCCATCTacaaagaggaggaggaggcattTAAGAGTTGGTACAGCAGGACTCCAATGGGCAAGAGACGAGCACGGGCAAGAAAAGCATTTCAAGAAGCAGCAGagctgaaaaaaggaaagaagaaacatGGAAAGGGCTTAAAATCGACAGCAGAGGCAaaggggaagaagaaaaagaagtgaaTGTTCTGCTGTTTCACTGAGAGCTGTAGTGATTGTCTGTTCAGAATATCAGAACTGTTCCAGTTTATTCCAGGTCTTTAGTTCCTTTCCTAgaaaaactttacattttattatgatatttatttatattgtactGTTATATCATGCTTTAATGTAAAACCTGAAGACAAAAACTGAACAACTTTGAGGGGAAACTGCAATTCCTCATCTGGCCACTGGAGAGCAGCAGCAGGCTTTCTCATAATTCTTCACAcagatttgtttatttcatttacctCTGTGCTTGTAGCTTAATAtgacatgaataaatattttaatttgttcacTAA
>XM_034310497.1
GTGTATTAAAGTATAGGCAGATTACAAGAATTTACAAGTTACAAAGAAGTGACAAATTGAGTTTGATAATCTCAAAACTAAACAGCGTGGGGAAAATGTGGAATACAGTTCCAGGGTCTTTAGCCTGTGAACCTCGTAGCTGATTTGAATACAAAGAGCAAACGGGCTGCGCGAGCGTACAGCACAGCTTGCCTTGCTAACAGAAGATTTACCGCTTTAACTTCACTTCgcgtttctttttttatcccTCGATAAGATAAGATGATCCGAAAATGTCTTAAAAGATAACCCCTTTGATTACGGCGCCGTTGTGGTACATAATTTAATGAGTATTGTCTTCTGTTTTCAAGCAGCTCTGTTTAGCTGAGCGCATTCTGTGCTAAGCGCGTCTCCAGCTGAGCGCGCGCTCACATTCTGCACACTTTGATCTCGTCGCCATGGCAGCGGCGCGAGGCGTCGAGCAAACTACCCGGGGCGCGAGGAAGGAGAAAGTCAGCAGTTTGATTAGTCATAGTGGATGGTTTAATATATGTATTTCCTTTCATTAAATCATGCGCCTTCTGACATGAGCtcgtgcattttttttgttgttgttgaacaGTTCATGTTTCGGAGTTCAGTGTGGAAATATATGTTGAGATTATTCGCACAGACTCACACTGAAGCGCACAGACTTGTGGAAAAGTGAAGTGATCACAGTGAAGGATGTCACACAGGTCTTATGGCAGAATGTGGGCAGATGCCCAGGGGGCCTTGCAGGATCTACTGCAAGAAGAGATGCCCCCGTTGCTGCCCTGTCCACAGAAGGATCGTTTTCAGGTCTTTCAGACTTTGGCCACTTTCTACCTGCGCTACCTCCAGATCTTCCGGGGTCTGGAGGCAGCCTATGACCAGATCGTTCATCCCCAGAAGAGACATGTGGTACGCCACGTCCTGGAAGGAGTCATGGGGAGATTGGTGGAGCTGAAGAACGAGATGGTAGAATTAGAGTTCTCTGAGTTTCACTATTTTGACGACGTCCTACAGGACCTGAAGATGACACCTGAGGACTTGGAGGTTCCCATCCCACGCTATTTTGTGAGGGAAAGGATGAAAgcactgaaagaaagagagaaaatcctGGCTCATATTCTGGCTAAAAAGGCTAACATAGAACAGGAACCTGTTGCGGTACACAGTATGACAGTGGAGAGGGCAGTGCTATTGCTGCAGGTGAGTGAACGTGCGCGGCAGGGACGCCTCAGAGCTCGTTTTATGAAGGAGATCCGAGATGAGGAGAGGAAAAACCAGCATCAAGTGATCAACAGCACACTGGATCCCCATCTCTCAGCCACTCTCATACAGAAGACATGGCGGGGTTACTGGCAGAGGAAGAGGACCAAGAAAGATCGTCTGGAGGAAATGATATTTTTGGGAATGATAGACCCCAAACTCCCAACACCCAGTCCTGCTCAGCAGCGAGCAAAGCATGTAGAAAGCAGCAGGCATCAGATGCAGGAGCGGCATGAAGCAGAATACCAGCAGGCCCTGATCACCATCAAGGAGTCTGTTCGCTTGGTAGACGGACCTGACATAAAGGAAACACTCCAGGACCAGATACGCCAATGGTTCCTCGAATGCCGAGATGCCACCGGAAAGTTTCCTGATTTCCCAAGCAGTGAGGATGGAGGATCAGCTTCCATATTTGCACAGAAGACGCCAGAGGAGGTTGCTGCTGAGCTAGCCGCTAAACAacaagagaaggagaagaagtcCAAGGggaagaaagacaaaaatgctgtaaaggacaaaaagaaagacaagaagGGGAAGACTAAAAGCAAAGGCGAGAAAGCTGATACAGCGgaggaggaggagggatggAAGATGAGCCCCAGTAACTTTCTGCCAACTGTGGTTGAAGGAGCTAAGATATACAGAGAGGTTTGGCAGGCCCGAGACGAGGGCCAGAACTTCCACCAGCGTTTTGATCCTGAGCTGGTGCGAGAGGAGAAGAGAATGGAGGTAGAAGGGGAGGTCAGAGTTCAGGTAGATGAGCTAATGAGACAGGAACTGAAGAATCTCAAACTGGTAGTGGACCGGGACAAGGgcaacaagaagaaaaaagggaaaaagtcTAATAAAAAGaagaaaaagaaagcaaaaaagagtggaaagaagaagaagaagaaagagaaagatctTACAGCAGACAGGACCATTGAATCAATATACGAGGAGCTCGTTCTGGAAGGCATCCTGATGCAACCGATGACCGTAAAATTATGTGATTACCTCGgGGAATACAGTTACCTGGGTACGAGCCTGAGGCAGGCAGACATTGAGCCCATGCCATCCCTCTCAGACGTCAGACAGCTCATTGCTCTGTATGGCGTGCTGCCTCTGGGCTCTCAGTGTGTACATGAGAGAGGACCCCTAATCCGATCAGTGCTGCTGGCCGGTCCATCAGGCGTGGGTAAAAGGATGCTGCTCCATGCCCTGTGCACCGAGACTGGGGCCAATCTGTTCAACCTCTCCCCTGCCAACCTGGCAGGCAAATACCCAGGCAGGAGTGGCCTCCAGTACCTCCTGCATATGGTCTTGAAGGTGGCTCGCCAGCTGCAGCCCTCTGTCATCTGGATCGGAGACGCTGAGAAAACATTCTACAAAAAAGTCCCAAAACCAGAGAAAGAGATGGAACCCAAAAGGCTGAAGAAAGACCTGCCAAAAGTGGTAAAGTCCATTAAAGCAGAGGATCGTGTGCTGCTGGTTGGGACATCTCGCAGACCTTTCGACGCAGATCTCAAAGCATTGTGTAAAGTTTACAAAAAGATCATCCTGATTCCCAGACCAGACTATGCTTCAAGACTGAatctaTGGAAAGAGCTGCTCAGGGTGAGAGGTGTTCAGTTCAGCCCCTCTCTGGACCTCAGCTCCTTGGCTAAAGTCACAGACGGCTACACTCAGGGTCACATCCTGCAGGCTGTGCGGAGTGTCTTGACCTCTCAACGCCTCAGTCGGCAAACCAAGAAACCCCTCACTGCGCTGGAGTTTATCCCTCCTCTTGCCAGACAAGACCCCATCTacaaagaggaggaggaggcattTAAGAGTTGGTACAGCAGGACTCCAATGGGCAAGAGACGAGCACGGGCAAGAAAAGCATTTCAAGAAGCAGCAGagctgaaaaaaggaaagaagaaacatGGAAAGGGCTTAAAATCGACAGCAGAGGCAaaggggaagaagaaaaagaagtgaaTGTTCTGCTGTTTCACTGAGAGCTGTAGTGATTGTCTGTTCAGAATATCAGAACTGTTCCAGTTTATTCCAGGTCTTTAGTTCCTTTCCTAgaaaaactttacattttattatgatatttatttatattgtactGTTATATCATGCTTTAATGTAAAACCTGAAGACAAAAACTGAACAACTTTGAGGGGAAACTGCAATTCCTCATCTGGCCACTGGAGAGCAGCAGCAGGCTTTCTCATAATTCTTCACAcagatttgtttatttcatttacctCTGTGCTTGTAGCTTAATAtgacatgaataaatattttaatttgttcacTAA

Function

symbol description
iqca1 Predicted to enable ATP binding activity. Orthologous to human IQCA1 (IQ motif containing with AAA domain 1).

NR:

description
PREDICTED: IQ and AAA domain-containing protein 1

GO: NA

KEGG:

id description
K24837 IQCA, DRC11; IQ and AAA domain-containing protein

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026933141.2 False 3459 mRNA 0.48 20 26430072 26481633
XM_034310497.1 True 3569 mRNA 0.47 19 26430072 26481633

Neighbor

gene id symbol gene type direction distance location
gbx2 gbx2,LOC107096023,LOC103389863 coding downstream 11775 26414166 ~ 26418297 (-)
ccdc80l1 ccdc80,LOC108273094,LOC107565956 coding downstream 177824 26243940 ~ 26252248 (-)
si:ch73-193c12.2 LOC108273213 coding downstream 211494 26212753 ~ 26218578 (-)
gpr180 gpr180 coding downstream 361180 26060455 ~ 26068892 (-)
LOC113538391 NA coding downstream 612286 25811886 ~ 25817786 (-)
nck2b LOC108273233 coding upstream 170448 26652081 ~ 26702789 (-)
dph3 dph3,LOC107559917,LOC107660145,LOC107748572,LOC108437844,LOC107738311 coding upstream 223897 26705530 ~ 26708778 (-)
LOC113538336 LOC108273089 coding upstream 277873 26759506 ~ 26765206 (-)
mrps9 mrps9 coding upstream 285257 26766890 ~ 26788038 (-)
pou3f3b LOC108272408,LOC108437843 coding upstream 324148 26805781 ~ 26808675 (-)
G33697 NA non-coding downstream 187189 26239467 ~ 26242883 (-)
G33645 psmb3,LOC107586359,LOC107688824,LOC102792592 non-coding downstream 202884 26222463 ~ 26227188 (-)
G33617 NA non-coding downstream 320412 26089378 ~ 26109660 (-)
G33621 NA non-coding downstream 352171 26077375 ~ 26077901 (-)
G33538 fbxl3a,fbxl3,LOC108273248,LOC108436444,LOC107664003,LOC107670904 non-coding downstream 586740 25837298 ~ 25843332 (-)
G33780 NA non-coding upstream 50996 26532629 ~ 26532905 (-)
G33782 NA non-coding upstream 52030 26533663 ~ 26533925 (-)
G33803 NA non-coding upstream 128917 26610550 ~ 26610758 (-)
G33821 NA non-coding upstream 141366 26622999 ~ 26623218 (-)
G33822 NA non-coding upstream 141698 26623331 ~ 26623562 (-)
slc19a1 slc19a1 other downstream 324397 26081149 ~ 26105675 (-)
LOC113538393 NA other downstream 522078 25900730 ~ 25907994 (-)
nbeal1 nbeal1 other downstream 691255 25680090 ~ 25738817 (-)
uap1 uap1,LOC107724142,LOC107551035 other downstream 2798059 23615454 ~ 23632013 (-)
dmrt2b LOC108271504 other downstream 3204524 23222293 ~ 23225548 (-)
ecrg4b c6h2orf40,LOC108273346,LOC108437667,LOC105893352 other upstream 149196 26630829 ~ 26638538 (-)
si:ch73-23l24.1 LOC108437696,LOC108272416,LOC107559918,LOC107748583,LOC103032506,LOC107688887 other upstream 158200 26639833 ~ 26649379 (-)
ndufs1 ndufs1,LOC103033212,LOC107555450,LOC107748553,LOC107705604,LOC107660088,LOC107566318 other upstream 1264491 27746124 ~ 27757546 (-)
LOC113538277 NA other upstream 1353180 27834813 ~ 27841597 (-)
G34533 NA other upstream 1360926 27842559 ~ 27852397 (-)

Expression


Co-expression Network