G33822


Basic Information

Item Value
gene id G33822
gene name NA
gene type non-coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047596.1
NCBI id CM018542.1
chromosome length 35203048
location 26623331 ~ 26623562 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU39857
GGCCATTCCAAAAGCTTCTGCTTGCGTTTCATTGAATAGTTCATAGTTGATTTCgaggtatgttttggatcattgtcgtGTTGCAGAAGCCAATCTCTTTTTAGCTACAGTTTCTTAACTGACTGCGTCAAATTTGCTTCcagaatttgctgatatttactggaatccattcttccatctaTCTGTGCAATGTTTCCTGTACCAATGGCTATCACACCACCCCAACGCAAAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU39857 True 232 lncRNA 0.53 1 26623331 26623562

Neighbor

gene id symbol gene type direction distance location
iqca1 iqca1,LOC108437680 coding downstream 141698 26430072 ~ 26481633 (-)
gbx2 gbx2,LOC107096023,LOC103389863 coding downstream 205034 26414166 ~ 26418297 (-)
ccdc80l1 ccdc80,LOC108273094,LOC107565956 coding downstream 371083 26243940 ~ 26252248 (-)
si:ch73-193c12.2 LOC108273213 coding downstream 404753 26212753 ~ 26218578 (-)
gpr180 gpr180 coding downstream 554439 26060455 ~ 26068892 (-)
nck2b LOC108273233 coding upstream 28519 26652081 ~ 26702789 (-)
dph3 dph3,LOC107559917,LOC107660145,LOC107748572,LOC108437844,LOC107738311 coding upstream 81968 26705530 ~ 26708778 (-)
LOC113538336 LOC108273089 coding upstream 135944 26759506 ~ 26765206 (-)
mrps9 mrps9 coding upstream 143328 26766890 ~ 26788038 (-)
pou3f3b LOC108272408,LOC108437843 coding upstream 182219 26805781 ~ 26808675 (-)
G33821 NA non-coding downstream 113 26622999 ~ 26623218 (-)
G33803 NA non-coding downstream 12573 26610550 ~ 26610758 (-)
G33782 NA non-coding downstream 89406 26533663 ~ 26533925 (-)
G33780 NA non-coding downstream 90426 26532629 ~ 26532905 (-)
G33697 NA non-coding downstream 380448 26239467 ~ 26242883 (-)
G33823 NA non-coding upstream 437 26623999 ~ 26624225 (-)
G33824 NA non-coding upstream 1798 26625360 ~ 26626004 (-)
G33828 NA non-coding upstream 21458 26645020 ~ 26650272 (-)
G33830 NA non-coding upstream 27110 26650672 ~ 26650936 (-)
G33939 NA non-coding upstream 152461 26776023 ~ 26820169 (-)
slc19a1 slc19a1 other downstream 517656 26081149 ~ 26105675 (-)
LOC113538393 NA other downstream 715337 25900730 ~ 25907994 (-)
nbeal1 nbeal1 other downstream 884514 25680090 ~ 25738817 (-)
uap1 uap1,LOC107724142,LOC107551035 other downstream 2991318 23615454 ~ 23632013 (-)
dmrt2b LOC108271504 other downstream 3397783 23222293 ~ 23225548 (-)
ecrg4b c6h2orf40,LOC108273346,LOC108437667,LOC105893352 other upstream 7267 26630829 ~ 26638538 (-)
si:ch73-23l24.1 LOC108437696,LOC108272416,LOC107559918,LOC107748583,LOC103032506,LOC107688887 other upstream 16271 26639833 ~ 26649379 (-)
ndufs1 ndufs1,LOC103033212,LOC107555450,LOC107748553,LOC107705604,LOC107660088,LOC107566318 other upstream 1122562 27746124 ~ 27757546 (-)
LOC113538277 NA other upstream 1211251 27834813 ~ 27841597 (-)
G34533 NA other upstream 1218997 27842559 ~ 27852397 (-)

Expression


Co-expression Network