nyap2a (nyap2)


Basic Information

Item Value
gene id nyap2a
gene name nyap2
gene type misc
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047608.1
NCBI id CM018554.1
chromosome length 25848897
location 1133034 ~ 1174747 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU258108
cacacacacacacacacacacactcacatgtaagaaggtgtgtgtgggacGAGCAGATGAGACGTGTGGATGGTTCCAGAGCTGCGTGCTGATGGGGAGGGGGCCGACGAGCATCAATAAGCAGAGCAAGTCGTTTCTTCTTTTCATCCAGGATACCAAAGATGGACATCTTCCTCTCTCCagtcatcctcctcttcctcacccaTGTGTGTGATGCCTCTGGGCTGCACAGTCACCGCCGCACAGCCGTCAGcgtgtgtgtggaggaagatCACGCTGTACGGTGCTGAGAAGAGATCGTGTgcgcacaacacacacacatatacacacacacactcacacacacaggctcaacCGACTACGAACAGGTCTTTGGGAAACGAATCACCGACGGTGATCCCTCTGTCTGTACTCAAAGATGGATGGCAGCGAGGACGAGTGTGTGCGCTTTTTGCAATATGTAGAGGACATTGGCTTGAGGGCCTATGATGAGCTGGTGATCCAGAATGCGTCAGACATTGCGCGCGAGAGTGACCGAGTGCGTAACCGCCAGCACTGGGCATACCTCCAGGACCAGAGCCAGAAGAAAAGACGTCAGGAGGAGGCTATGAAGAGG
>XM_026943296.2
CAAGTGAGAGGGGGGTGGatcagagtgagacagaggaagagagagatagagggagggTAAGAGGGATGTCAGCAGAAGCAGTAGCcaatgagagggagagaaaagaaggaTGAGATTTCCATTAGACACTGACAAGAAGGGAAAAGATTGCTATtgtcttttttaaacaagccataATCTGCTGCAtctagacagagagagagagagagagagagagagagagagagagagagagagagagaggagagagagatgcagtgaCCGGTCTTCCTcatgtgggggtgtgtgtgagtgtgtgacaaaaaaaacagcagcatcaGGGAGGGAAGAATCCGAGCAACAGCAGTGGATAGCTGCAGCCGGTACACCggcgtctcacacacacacacacacacacacacacacacacactcacatgtaagaaggtgtgtgtgggacGAGCAGATGAGACGTGTGGATGGTTCCAGAGCTGCGTGCTGATGGGGAGGGGGCCGACGAGCATCAATAAGCAGAGCAAGTCGTTTCTTCTTTTCATCCAGGATACCAAAGATGGACATCTTCCTCTCTCCagtcatcctcctcttcctcacccaTGTGTGTGATGCCTCTGGGCTGCACAGTCACCGCCGCACAGCCGTCAGcgtgtgtgtggaggaagatCACGCTGTACGGTGCTGAGAAGAGATCGTGTgcgcacaacacacacacatatacacacacacactcacacacacaggctcaacCGACTACGAACAGGTCTTTGGGAAACGAATCACCGACGGTGATCCCTCTGTCTGTACTCAAAGATGGATGGCAGCGAGGACGAGTGTGTGCGCTTTTTGCAATATGTAGAGGACATTGGCTTGAGGGCCTATGATGAGCTGGTGATCCAGAATGCGTCAGACATTGCGCGCGAGAGTGACCGAGTGCGTAACCGCCAGCACTGGGCATACCTCCAGGACCAGAGCCAGAAGAAAAGACGTCAGGAGGAGGCTATGAAGAGGATGGGCGAGGAGGTGGCTGGGGTGGCAGATGGAGGGGCTTATGCGGGTAAACACTTCCGCATGGGCTTCATGACGATGCCGGCTCCCCAGGACCGGCTTGCGGCGCCGAGCGGGCCGGGTTTCACCGTACGCTCCCAGTCTCTGCACTCAGTGGgaggcagtgaggaggagggGGGCAGCCCGACCCTACGTAAACAACCACCACCCAAACCCAAACGAGACCCCAACACCAAACTGAGCACCTCGTCTGAGACGGTCAACACCACCCTCACCACAGGCAAGGAAGTGAGGGACATGGATAAGAGTGATGCATCCAAGAGTCGTCCATGCAGTGAGGAATATCGCCGCATGCCTCCTCCCAAACCTAAGCGCAACCCCAACACTCAGCTCAGCACCTCTTTCGATGAGTCCTACATCCAAAACCATGGCACCAAGTTCAAGTCCGCTTCTTTGCCACGACGACAGAAGAAGAAATCAATGTCACAGAATCAAAGCCCTGCCCTGGACACTGATGAGGAAGCAGAGCCTGTCTACATAGAGATGGTGGGAAACATCCTACGTGACTTTAGCCAATATACTGGAGGCAATGCTGATGAGGAGGACGATcagggagagagtgtgtatgaggaGATGAAATATCCCACCTACGAAGAAGCTGCGCTATCAACTGAGCATGTCCATGCACGCTGGGAGCCAAGCCTAGCTCCTGCGGTTTCAGATATAGACCTAACGCGATCATCAATCCCTCGTGGCTCACTTTGTGACATACCCGCCCCCTTTCCTAACTTACTGACTCACAGGCCTCCCCTGTTGGTGTTCCCCCCTGCACCTGCTCAATGCTCCCCAAATTCAGATGAATCCCCCCTTACTCCTCTGGATGTCACCAAACTCCCTATGATAGAGAACGTTGGCTATGGCAAACCTGGTTCTTCCCCAACAGCTGGTGATTCTGGACAACCCTTGCCACCACAACAGTCTTTGGGgcaacaccaccatcaccatcatcaccatcataagAAGTCACTGGACAGTAAAGAATCTTCAGCCTCCCATACAATCACAGTATCTGGACGTTCCTCGGCTCCACCTCTACCATCAGCACTATACAAGAGTGGCGGTTCTTCAGCGGCTCATGGTTACCCTCGCAGCCACTCTGCCTGCCCATCCCCTATCAGCATGGGCCGCTCTTTGACCCCCCTCAGCCTCAAACGTCCACCACCATATGACGCTCTGCTGACTGGCACGATTCCCCGCAGTGCCTCCGGAGTGTCGCATAGCTCCCATGAGAGCGGACGTCTTTCAAACTCCTCCAGCATCCATGGTGGATCCATGCAAAATGTTTCCACTGCATCAGGTGGATCAGGGGGGTCTAGTTCAGGGTCAGGAGGCCGTGGATGTCGAACACCAACCAGTCCACTGGATGAGCTCAGCAACTTGTTTTCCTCTAGCAAGAATATGCTGAGGAAAGGCTCCGGAGGGCGCAAGAACAAGGAGCTCAGTGAAAttgaAGGGAAAACCAGGAGCCACAGCATTGACAGTAAAGATCGAGCTCTTCGTAGCTCCTCCCCAAAAGTGCAGGACTGGGACACGCCCTCAGGACAATCTGCCACGCCCACTCGTCTAGGCCGCTCCTCCATCAGCCCCACCACCATGCTGGGGACTGGAACCTCAGAGCCAAAAGCTGCCTGTAAGCTCGGCCGTTCTGCCTCTACGTCAGGAGTGCCGTCTCCAGTAGGAACGCCTCAGCGACACGCCCCCGAGtcctcagccaatcagagcgggAGCCCATGCCAGATGCCCCCAGTGCCGTGGGCATGCGGGGACAACACCATGATGGAGATGATCGAGAAGAAAAGGCATCTTTGCAAGGAGATCAAGGCACGGCAGAAGCCAGACAAGGCCCTGTGCAAACAAGACAGCATGCCCATCCTCCCCAGCTGGAAAAAGACCAACGGGGGCAAAAAATACGGCCCTCCACCCTACTCAGCCCAAACCACAGTCTTCTGGGACACAGCTATCTAACACGAGGGAGTGATTGAGGTAACACGGTAGCGAGTAATAATCACCGTTCAAGGCCTCCAGTCTATAGACACTGGAACACCGGATGAGGAGGGGGTGTGGCCAACCGGTGGCTGTTTAGCCAATAGGAAGCAAAGGGAATTTAATTGAAATTCTGTAGCAAATCAACTTAAATCTGAGGGCTTCAGATTTAAGTGTCCTTGGTTTCTTATCACtgtttgtatttcatatttttatatcgaaaaaaaggaaaatgtgaaaCGATGCTTGGTGTCAATCGAGGTTTTCTAAAGGAGAAAGTCGAGTGTAAACAATTAGCCATGCGATGATATGCATCCCCTCAAAGATGGTATTTTTGTTCTGttcctcttcttttcttcctttttttctttttctatgttTCTATGTTGCATCAACGCTTACCagtgttgaagaaaaaaaaatctatagcTTATAATATATATGGTATAAAAAAGAACTATgttggaattgaattgaatatgtgacaatttttatatatgtgttaAAGGAATGTCAgaggataattttttttcatataggGATTTAACAAAAGCACTATTTTAAGAAAAGGAATCTATTTTGGACATCTTAAGCTTGGGTATTGTAATGAACCGTTGAGATGGTGGATTGTTGTCGAGGTCTTGTTGTGTGTACTTGAGGTGCTGATCTCTCTTCAAATCAAACTCAACTACTTTAAAGCCTGATATTTCTGG

Function

symbol description
nyap2 Predicted to be involved in neuron projection morphogenesis and phosphatidylinositol 3-kinase signaling.

NR:

description
PREDICTED: neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adapter 2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU258108 False 616 lncRNA 0.54 2 1133422 1141120
XM_026943296.2 True 3757 mRNA 0.51 7 1133034 1174747

Neighbor

gene id symbol gene type direction distance location
zgc:158328 NA coding upstream 193491 878905 ~ 939543 (+)
fbxo46 fbxo46 coding upstream 338168 789625 ~ 794866 (+)
si:ch211-11n16.2 si:ch211-11n16.2,LOC108278225,LOC108442869,LOC107678255,LOC107749652,LOC107561380,LOC105909327,LOC107758522 coding upstream 432722 684529 ~ 700312 (+)
LOC113544571 NA coding upstream 522014 599502 ~ 611020 (+)
LOC113544546 NA coding upstream 535101 587579 ~ 597933 (+)
rhbdd1 rhbdd1 coding downstream 50440 1225187 ~ 1232959 (+)
col4a3 NA coding downstream 115777 1290524 ~ 1333869 (+)
sst1.2 LOC108277696 coding downstream 163122 1337869 ~ 1339612 (+)
sst1.1 sst1 coding downstream 181431 1356178 ~ 1357336 (+)
masp1 masp1 coding downstream 200011 1374758 ~ 1389542 (+)
G217779 NA non-coding upstream 176386 883472 ~ 956648 (+)
G217778 NA non-coding upstream 176827 878345 ~ 956207 (+)
G217795 NA non-coding upstream 177612 954544 ~ 955422 (+)
G217734 NA non-coding upstream 359527 772966 ~ 773507 (+)
G217722 NA non-coding upstream 393168 738371 ~ 739866 (+)
LOC113544667 NA non-coding downstream 21530 1196277 ~ 1197688 (+)
G217931 NA non-coding downstream 23440 1198187 ~ 1217742 (+)
G217967 slc8a2,LOC108277508,LOC108433971,LOC103138329,LOC103358178 non-coding downstream 217435 1392182 ~ 1402535 (+)
LOC117599019 NA non-coding downstream 318740 1493487 ~ 1495245 (+)
G218385 NA non-coding downstream 356087 1530834 ~ 1562271 (+)
trnav-aac_19 NA other upstream 18648 1114314 ~ 1114386 (+)
LOC117599076 NA other upstream 742928 362243 ~ 390106 (+)
tmprss4a LOC108277792 other upstream 804895 297497 ~ 328139 (+)
LOC113544658 NA other downstream 315547 1490294 ~ 1493031 (+)
fgf12b fgf12,fgf12b,LOC108278337,LOC108411839,LOC107689585,LOC107549734 other downstream 351551 1526298 ~ 1671341 (+)
gria4a gria4a,LOC108278238,LOC107756206,LOC107566895,LOC107689577,LOC107560842,LOC107725765,LOC102308165,LOC107670112 other downstream 668610 1843357 ~ 1907243 (+)
G218476 NA other downstream 747024 1921771 ~ 1924284 (+)
LOC113544529 nox4 other downstream 862984 2037731 ~ 2052595 (+)

Expression


Co-expression Network