Gene
RNA
| Item | Value |
|---|---|
| gene id | G358286 |
| gene name | NA |
| gene type | non-coding |
| species | striped catfish (Pangasianodon hypophthalmus) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_047619.1 |
| NCBI id | CM018565.1 |
| chromosome length | 19570078 |
| location | 65658 ~ 65927 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU424492 | True | 270 | lncRNA | 0.39 | 1 | 65658 | 65927 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC113525130 | NA | coding | downstream | 233746 | 299673 ~ 306763 (+) |
| plekhf1 | plekhf1 | coding | downstream | 254609 | 320536 ~ 323330 (+) |
| si:ch211-260e23.9 | LOC108259284 | coding | downstream | 265060 | 330987 ~ 338641 (+) |
| nae1 | nae1,LOC107562208 | coding | downstream | 296958 | 362885 ~ 376246 (+) |
| dync1li2 | dync1li2,LOC107562216,LOC106561980 | coding | downstream | 340052 | 405979 ~ 420868 (+) |
| G358282 | NA | non-coding | upstream | 4763 | 60658 ~ 60895 (+) |
| G358281 | NA | non-coding | upstream | 5104 | 60141 ~ 60554 (+) |
| G358277 | NA | non-coding | upstream | 20062 | 44768 ~ 45596 (+) |
| G358274 | NA | non-coding | upstream | 32680 | 32747 ~ 32978 (+) |
| G358290 | LOC105905159,LOC107565776,LOC108264773,LOC107741896,LOC108412826,LOC105889141 | non-coding | downstream | 67504 | 133431 ~ 134561 (+) |
| G358289 | NA | non-coding | downstream | 69454 | 135381 ~ 138331 (+) |
| G358304 | NA | non-coding | downstream | 113099 | 179026 ~ 179314 (+) |
| G358305 | NA | non-coding | downstream | 114011 | 179938 ~ 180150 (+) |
| LOC113525132 | NA | non-coding | downstream | 207527 | 273454 ~ 274623 (+) |
| ccne1 | ccne1 | other | downstream | 278135 | 344062 ~ 351769 (+) |
| cmtm4 | cmtm4 | other | downstream | 360946 | 426873 ~ 452014 (+) |
| c25h16orf87 | c27h16orf87,cunh16orf87,clg02h16orf87,cssa11h16orf87,LOC103043940,LOC106587296 | other | downstream | 2255197 | 2321124 ~ 2386730 (+) |
| igdcc4 | LOC108259659 | other | downstream | 2570362 | 2636289 ~ 2694287 (+) |
| cilp | cilp,LOC107670750,LOC107750479,LOC107554910 | other | downstream | 2719700 | 2785627 ~ 2823338 (+) |
