npy2rl (npy2rl,LOC108439369,LOC107714138,LOC107692719,LOC107758849,LOC106578155,LOC105030636)


Basic Information

Item Value
gene id npy2rl
gene name npy2rl,LOC108439369,LOC107714138,LOC107692719,LOC107758849,LOC106578155,LOC105030636
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047620.1
NCBI id CM018566.1
chromosome length 19313417
location 38735 ~ 45184 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026910891.2
aatcatCTTGTCCTTTAATGAAAGATCTCCAACACAAAACTTTATTCACACTGAAAACCTGAGATGTCCATTTGCTGGATCACTTGAATGAGAACCTCAGCTCAGTGTGATTATGTGACAAATGGATGTCTTCAGTTTAGTCAATGGCTCCTCCAGGCCCGAGGTCCTGACCAGTGGTGTGGACTCGCCTGATGCCTCACTGACCCGTCCGCTGTTGGACCTGGAGGACAGTACCAAGCATCTGGGGGTTCAAGTCATTCTGATTCTGGCCTACAGCACCATCATCCTCCTGGGTGTGGTGGGAAATTCGCTGGTTATCTATGTAGTGTACAAGTTCAAAACGCTCCGCACTGTCACGAACTTCTTCATTGCCAACTTGGCAGTAGCGGACCTGCTTGTTAACACATTGTGTCTTCCCTTCACTTTGGCCTACACTTTACTCGGGCAGTGGAAGTTTGGGCAAGTGCTTTGCTTTACTTTACCATATGCACAGGGTCTTGCTGTCCATGTCTCAACTGTAACCCTAAATGTAATTGCACTAGATCGCCATAGATGTATTATTCACCATCTGGAAACACGGCTATCAAAAGACACCTGCTTTCTGGTCATTGCTCTCACCTGGGTTATAAGTGCTGTCCTGGCAAGCCCACTTGCCATTTTTAGGGAGTATGGGGTTGTTGATCTCTCTCCAGGTGAATCCATTGAAGTGTGTGGAGAGAAGTGGCCAGGTAGCAGCACAGACAGCACTCTGTACTCagtCTCCATGCTGCTGATTCAGTATGTGTTTCCACTCGCTGTCATTTCTTTCGCATACATCCGGATATGGAGCAAACTCCGTAATCACATAAACCCGGCTGGCCACAATGACTCCCACCATCGTCGCCGTAAAACCACTAAGATGCTAGTCACCATGGTTGTGGTGTTTGCGGTGAGCTGGCTGCCATTCCATGCCTTCCAGCTGGCGATTGACATTGACAGCAGTGTCCTGGTAATGAGAGACTTCAGGCTTTTGTACACAGTTTTCCACATTGTGGCTATGTGCTCCACCTTTGCCAACCCGCTTCTCTATGGCTGGATGAACAGAAACTACCGAAGTGCCTTTATGGCGGCCTTTCGATGTGAGAAACAGCTTGGTTCAGCGCACCCTGATGTTCATAATGCTATGACAGTCCGCACCAAAAAGGCTCTTGAGGCCCGTAATGTGCTTGAAACACAACTCAAGGCCACAGAAGTTTGA

Function

symbol description
npy2rl Enables neuropeptide binding activity. Predicted to act upstream of or within G protein-coupled receptor signaling pathway. Predicted to be located in plasma membrane. Predicted to be integral component of membrane. Is expressed in eye and intestine. Human ortholog(s) of this gene implicated in Huntington's disease; morbid obesity; and obesity. Orthologous to human NPY2R (neuropeptide Y receptor Y2).

NR:

description
PREDICTED: neuropeptide Y receptor type 2-like

GO: NA

KEGG:

id description
K04205 NPY2R; neuropeptide Y receptor type 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026910891.2 True 1237 mRNA 0.48 4 38735 45184

Neighbor

gene id symbol gene type direction distance location
eif3f eif3f,LOC107723164,LOC107758850,LOC107665937 coding downstream 14548 20946 ~ 24187 (-)
zgc:77880 zgc:77880,LOC108258288,LOC107723165,LOC107692630,LOC108439367,LOC105904859,LOC107665980,LOC107758853,LOC105030638,LOC107590776 coding downstream 20543 11862 ~ 18192 (-)
rbm46 rbm46 coding upstream 13852 59036 ~ 68317 (-)
lratb.2 LOC108258976 coding upstream 33030 78214 ~ 83790 (-)
LOC113524574 LOC108258977 coding upstream 38619 83803 ~ 92020 (-)
LOC113524573 lratb,LOC108258974,LOC108439370,LOC107758869,LOC107590749,LOC106608435 coding upstream 46951 92135 ~ 113740 (-)
fgb fgb,LOC107758871 coding upstream 80346 125530 ~ 130361 (-)
G368685 NA non-coding upstream 133998 179182 ~ 184646 (-)
G368689 NA non-coding upstream 140650 185834 ~ 193914 (-)
G368713 NA non-coding upstream 198993 244177 ~ 244780 (-)
G368725 NA non-coding upstream 236255 281439 ~ 281903 (-)
G368903 NA non-coding upstream 533409 578593 ~ 581860 (-)
si:dkeyp-75b4.8 NA other upstream 157470 202654 ~ 227102 (-)
pmm2 pmm2,LOC107692644,LOC101469678,LOC102299325,LOC100707130,LOC102200931,LOC107082664 other upstream 239679 284863 ~ 289908 (-)
rasd3 LOC108258668 other upstream 545952 591136 ~ 592595 (-)
prkcba prkcb other upstream 608269 653453 ~ 702345 (-)
zgc:77849 zgc:77849,LOC108258689,LOC103038624,LOC108439082,LOC107722949,LOC107692663,LOC107590708 other upstream 824575 869759 ~ 948803 (-)

Expression


Co-expression Network