G147416


Basic Information

Item Value
gene id G147416
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030141.1
NCBI id CM030141.1
chromosome length 22147039
location 1063085 ~ 1116950 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU185496
CTCCAACAAAACAGCAGCGGCAGTGAGCGCTCAGCAGCCCGCAGACGCAGCGCCCGACACAGTGCCGCATCCTCCTCCACAGACCCGACCCGACCCGCCGCGCTGCCAAGCCCTCCATATGGGCTCACAATGCGAAGGATTAGGGCCAACGCCATCGCAATTCTGACTGTCGCATGGATCTTGGGCACCTTCTATTACCTGTGGCAGGATAATAAACCCCATTCATCTCCGTCTTCAGCATCTCAACCCAGGTCCACCGGCACCAGAAACCATGGACAGAGACCCGCTGGGCGGCTGGAGATCCGCCGAGAGGACAGGACTATTGCGCTCATTGTGACACGTTCCCCCCGGACTGAGCGAGGcagcaggcaggctggccattTTGATGAGAGGGCCTACCTGTCTGATAAGCAGCTGAAGGCAGGTGAGGACCCCTACCGTGAGCATGCCTTCAACCAACAAGAGAGTGACCGACTCAGCAGCGACCGGGCCATCCGTGACACCCGCCACTACAGGTGTGCAgctgtgacctttgaccccgaTCTGCCTCCAACCACTGTGATTATTACCTTCCACAATGAGGCTCGCTCAACACTCCTGCGCACTGTCAAGAGtGTTCTTCTCCGTAGCCCAGCCAGCCTCATCCAGGAGATCATTCTCGTGGACGATTTCAGCACTGACCCTGAAGACTGCCTGCTGCTAGCTCAAATCCCCAAGGTGCGATGTTTACGAAACCTCCATAGAGAAGGTGAGAGTGATTCCAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU185496 True 765 TUCP 0.58 5 1063085 1116950

Neighbor

gene id symbol gene type direction distance location
AMCG00000053 vps39 coding upstream 20482 991040 ~ 1042603 (+)
AMCG00000052 NA coding upstream 84541 957706 ~ 978544 (+)
AMCG00000049 NA coding upstream 164540 886906 ~ 898545 (+)
AMCG00000051 NA coding upstream 176293 886400 ~ 886792 (+)
AMCG00000048 NA coding upstream 246568 815941 ~ 816517 (+)
AMCG00000054 NA coding downstream 22093 1139043 ~ 1164404 (+)
AMCG00000055 NA coding downstream 126248 1243198 ~ 1294765 (+)
AMCG00000056 NA coding downstream 244427 1361377 ~ 1383054 (+)
AMCG00000057 NA coding downstream 576202 1693152 ~ 1719606 (+)
AMCG00000066 NA coding downstream 623859 1740809 ~ 1781771 (+)
G147405 NA non-coding upstream 121174 940858 ~ 941911 (+)
G147314 NA non-coding upstream 577624 482114 ~ 485461 (+)
G147313 NA non-coding upstream 589578 470695 ~ 473507 (+)
G147292 NA non-coding upstream 676132 386290 ~ 386953 (+)
G147288 NA non-coding upstream 706097 356772 ~ 356988 (+)
G147466 NA non-coding downstream 71858 1188808 ~ 1189042 (+)
G147551 NA non-coding downstream 372630 1489580 ~ 1492313 (+)
G147564 NA non-coding downstream 469107 1586057 ~ 1586324 (+)
G147565 NA non-coding downstream 471127 1588077 ~ 1588295 (+)
G147579 NA non-coding downstream 496360 1613310 ~ 1615951 (+)
G147311 NA other upstream 564574 449652 ~ 498511 (+)
AMCG00000032 NA other upstream 808644 231336 ~ 254441 (+)
AMCG00000025 NA other upstream 958723 55439 ~ 104362 (+)
AMCG00000026 NA other upstream 1025310 28694 ~ 37775 (+)
AMCG00000073 mta1,LOC107679789,LOC107666257,LOC107600838 other downstream 919073 2036023 ~ 2058770 (+)
G147726 LOC104962440 other downstream 1286780 2403730 ~ 2403972 (+)
AMCG00000094 NA other downstream 2573822 3690772 ~ 3699093 (+)
AMCG00000093 srp14,LOC106610862 other downstream 2604035 3720985 ~ 3724316 (+)
G148040 NA other downstream 2643229 3760179 ~ 3760624 (+)

Expression


Co-expression Network