Gene
RNA
| Item | Value |
|---|---|
| gene id | G149450 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030141.1 |
| NCBI id | CM030141.1 |
| chromosome length | 22147039 |
| location | 10021422 ~ 10021853 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU188070 | True | 432 | lncRNA | 0.36 | 1 | 10021422 | 10021853 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00000306 | arg2 | coding | upstream | 11311 | 10002721 ~ 10010111 (+) |
| AMCG00000292 | NA | coding | upstream | 101340 | 9911136 ~ 9920082 (+) |
| AMCG00000294 | smoc1 | coding | upstream | 144478 | 9864987 ~ 9876944 (+) |
| AMCG00000293 | NA | coding | upstream | 180993 | 9828089 ~ 9840429 (+) |
| AMCG00000282 | NA | coding | upstream | 274414 | 9721890 ~ 9747008 (+) |
| AMCG00000307 | NA | coding | downstream | 41958 | 10063811 ~ 10072297 (+) |
| AMCG00000297 | atp6v1d,LOC106571673,LOC107559096,LOC107568214 | coding | downstream | 71140 | 10092993 ~ 10100250 (+) |
| AMCG00000305 | NA | coding | downstream | 526977 | 10548830 ~ 10549199 (+) |
| AMCG00000304 | NA | coding | downstream | 528079 | 10549932 ~ 10550914 (+) |
| AMCG00000314 | dnal1 | coding | downstream | 1106005 | 11127858 ~ 11131679 (+) |
| G149415 | NA | non-coding | upstream | 46250 | 9973048 ~ 9975172 (+) |
| G149416 | slc39a9,LOC107721951,LOC107664419 | non-coding | upstream | 58851 | 9957713 ~ 9962571 (+) |
| G149359 | LOC103376870 | non-coding | upstream | 244434 | 9719947 ~ 9776988 (+) |
| G149253 | NA | non-coding | upstream | 736271 | 9280063 ~ 9285151 (+) |
| G149172 | psmc6 | non-coding | upstream | 1005271 | 9013371 ~ 9016151 (+) |
| G149454 | NA | non-coding | downstream | 7841 | 10029694 ~ 10030786 (+) |
| G149455 | NA | non-coding | downstream | 12721 | 10034574 ~ 10035072 (+) |
| G149464 | NA | non-coding | downstream | 26543 | 10048396 ~ 10048621 (+) |
| G149465 | NA | non-coding | downstream | 27412 | 10049265 ~ 10049532 (+) |
| G149466 | NA | non-coding | downstream | 29323 | 10051176 ~ 10051753 (+) |
| G149424 | NA | other | upstream | 50621 | 9969324 ~ 9970801 (+) |
| AMCG00000281 | cpsf2,LOC106608196 | other | upstream | 430334 | 9561557 ~ 9591088 (+) |
| AMCG00000286 | sos2 | other | upstream | 475011 | 9514822 ~ 9546411 (+) |
| AMCG00000285 | map4k5 | other | upstream | 534733 | 9440061 ~ 9486689 (+) |
| AMCG00000249 | acta1,actc1,LOC103383882,LOC105024319 | other | upstream | 1436149 | 8579717 ~ 8585273 (+) |
| G149525 | LOC100846954,LOC107575789 | other | downstream | 512737 | 10534590 ~ 10535137 (+) |
| AMCG00000352 | NA | other | downstream | 1943702 | 11965555 ~ 11995026 (+) |
| G149859 | NA | other | downstream | 2657817 | 12679670 ~ 12727903 (+) |
| AMCG00000381 | NA | other | downstream | 2945024 | 12966877 ~ 13030853 (+) |
| G150069 | NA | other | downstream | 3668986 | 13690839 ~ 13692589 (+) |
