AMCG00000800


Basic Information

Item Value
gene id AMCG00000800
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 3613564 ~ 3637244 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00000800
GGGCGCAGTTGGCACCCCGCCGCCCCCCGGTCCGCTTGCTGCGCCGGCCGGTGACACCCCGGAAGTAGATGACCGTTGCCACAGCGACGCGGATGTTTGGCGGAAGTTTCGGATTCGTTGTCGCGTGCGGGAGGAAGAGAAGCTGAGCAGGTACAAGAACGCCATCGTTATGGAGGTGGTCCATTCAGCATCCGAGCTGTTTACAAAGagctttaagaaaaaaactccTCTTCCTTTGAACCAGCTTGTGGAAGAAACCAAAAAGGGAGCAGATGTACCCAACCACCTTCTGGAAACAAAGATTTATGCCAAACTCCAGAGTAACAGTGTCATACAGGCTGAACCCGCTGTACTGCATTTCAGCGGCTTTGAACTGGGGAAAAGTTATCTGCAGGTCTTGCATCGTCTGGTGCCAGGGCTCTCGTACAACGTCACTGTGCTGTTCCGCCCAGATGAATGGCGTTATTTTTACGATTGTATTCGAGTTCACTGCAAGGGAGACGATAACCTCCTGGTTCCAGTTCACGCCTATCCTGTCATCGATGATTTGCACTTCCCTTCGCACATCAACCTGCGCAGCGTTGCCCTCGGGCAGAGCAAGACACACGTGATCCCGCTGAGCTGCAGCTGCCCGATAGACTTTGAGTTCCAGATCTACTGCCTCCAGCCCCACAAGGCCTTCTCTGTAGAGCCCCTTTCAGGGATCATTCCTGCGAACGGGCAGGTGGACGTTACCGTGACATTCTCCCCCTCTGAATATGGCACCGTGCAGACGACATTACAGCTGGTCATTTCGCAGTTCAACTCCAATTCTTATGTCTGTACCTTCACTGGGACCTCGTCTCCCAACCTGGGCCTGAGGCAACAGGACAAACATGAGGAAACACAAGTCTCCTTTGCCAAAGACCTGCTGGACCCTCAGCGGTTATCAATGGTGCATTTATCCAGGACAAAGCGAAAATCGAAGCCAACGCATTCCCCAGATAAACCCAAGGAGATCATCTACCAGAACATGAGGATTCCCGTGGCTTTATTGAACCCAGGCGCAGTGGCCAAGGTACTCCTTCAGGAGCCGGGGAAGCTGCGCGCAAAAGACTTGAAGGAAGCCCTGTCCCAAACCGGCGCTGGATTTCAGACCAGACAGATGAAAGAAGCCACATTTGACCAAAGAGTTCGTCAGGATGTGCTGGAAGAGAGAGCCAATCAGCTCAGATGGCAAGTGCACCTTGGCAGGGATCCAGTTTCGACCGCAACGAGACAATGCATTTTGGAGGAAAGGGACATTGCAGCACATGAGTATAtgTTGCAAAGAGGAGACGTCACAACAGAGCAAGAAATGCAAAGGACGCAGCCTCAGGTGTCTCAGAAGAGAGTCCTCCGCGATGCAGGACAGCTTCCTGTCTGCATTCCAGCGTTTGACGTCTATTCAAACAACCCCTGGGAAGCCAGACACAAAGCTCTCTGCCTTTTCCAGCAGACAGCCAGGAAGatcCTGATTCGCTGCCGCATGAATAACAGGCTGCTCTCTCTGAGAAAGCTGGTCCAGACGCTCTCCGACAGAACGGCTCAGGCAGGGGACTCAACATGCCGCACTAGTAACCAGGGAGAGAAGGCGTTCCCTCTGAAACTGTCCCTGGACAATTTGCTTCCCTTCACATTCCCCActtacaccccccccacccaggcCGACGAACTTGCTCCCGATGCCCTTGGACAGGTTCCTGTTAAACCCACTGAAATTGATATTAAAGCAGAGACTCCTTTTTTCAAGCTAAAGGTTCCCCAGCGCTACAGACTGATGGGATACCAGCCCGTGTCGGCGATGGCTGCATCGGCTAGCTTCGTCCCCCAGGCGCTGGCGAGACCGCTGAGGTCAGGAGCCGAGGACGAGCTGGGGCCAGCTGTGGTCCGCCCCCCCTCAGGGACGACACTGATTGACCTGGAAGATCCGCGAGACGAGGCGTCAGGACAGAGAGAGCTGGCCTTCACCGCGCCCCGCGCTCTGCTGAGGGCGCCAGAGTGCCACCCACTCAGGATCTTTAACCCCACTCCTGGGCTTCACACATTTCAGCCCCACCTCCCCTACCTGGAGACCGACCTCGAGTTTAATCTCTGCCCTGTCCCGAGGTACGCCATCACCAGGGCAGCCGTGGAGGGGGTTCGCGTCGCTGGCACACAGAAGAAATTCCTGGACCGAACGGAGGTGATTCCTGGGGTGATGACCTGGAGGAAGTTCCCATCGGCTTCTCTGGCCGCTCTCTCCACCGCCCCTCCGCTCACCGACGCCTGGACACCCAGAGGGTCGGACCTGTTCGGCTCGGACCTGCTGCCCGTCGAGGTCCCTCCTGTCCTGACCGGTCTGCCGGAGGAGCTGAGAGACGACGTCATGGACGGATCGTCTGAAACCGCGCCGGCGTCTCTCACTCCTGAGATGATCAAAGCCGAGTTTATGTTGACTGAGGGTCACACTCTGACACAAGAGAAAGACCATTCGACCCGGGAGGAAGGGGACGCGAGAGAGCCGCAGCCGCAGCAGCCCCCCCCAGCGCCGCGCAGCAGTGGACTGGGGGTCAGGGTCGCGGCCCGGCTCGGGCAGGTGCAGGCGCTGGCCAAGGAGGGTGGCAGAGACTCGGTACCCAGCTGAGGGGTTCTCGTTTGCGAAACAGTATACAGATGTTTTCTTCCGACGAATTAAGCTTTCTGAATgttgtaaaaaaagaaatgaaatgaagaCCATTGATCCTTCAGAATGTAATAGttgtgtaatgtatgtattccCCTATAAACTATTAatactgttatatattttaaatactgcataTGTATATAATAGTGTTatgattgtaaattattattatttgcggAGTTCAATGCTGAAGTTTctacaaatgattaaaaaatgactttCCTGTATTGGGGCGCCATCCAGTGGCTGCGATGCCAGTTTGTTGTGGATTGAGTCGGGCGCAGTGTAGCAGCTGTGGGGCGCGGCTGCAGTTCACTGGAGCTCCTCGAGG

Function

GO:

id name namespace
GO:0005215 transporter activity molecular_function

KEGG:

id description
ko04976 Bile secretion
ko04975 Fat digestion and absorption

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00000800 True 3017 mRNA 0.55 23 3613564 3637244

Neighbor

gene id symbol gene type direction distance location
AMCG00000803 NA coding downstream 2174 3594282 ~ 3611390 (-)
AMCG00000796 faima,LOC107723686,LOC107686598,LOC108425966,LOC108266416 coding downstream 31379 3576437 ~ 3582185 (-)
AMCG00000795 NA coding downstream 44915 3545289 ~ 3568649 (-)
AMCG00000794 NA coding downstream 96354 3511119 ~ 3517210 (-)
AMCG00000788 NA coding downstream 299439 3276258 ~ 3314125 (-)
AMCG00000801 NA coding upstream 13072 3650316 ~ 3650858 (-)
AMCG00000802 NA coding upstream 25003 3662247 ~ 3667451 (-)
AMCG00000807 NA coding upstream 83169 3720413 ~ 3745555 (-)
AMCG00000811 insig2,LOC106582059 coding upstream 253779 3891023 ~ 3894951 (-)
AMCG00000809 htr5a,htr5ab,LOC107684958,LOC107550720 coding upstream 293033 3930277 ~ 3933300 (-)
G126275 NA non-coding downstream 60587 3550840 ~ 3552977 (-)
G126037 NA non-coding downstream 1055315 2557991 ~ 2558249 (-)
G126005 NA non-coding downstream 1093344 2427941 ~ 2520220 (-)
G126020 NA non-coding downstream 1151076 2460715 ~ 2462488 (-)
G125875 NA non-coding downstream 1785822 1822252 ~ 1827742 (-)
G126296 NA non-coding upstream 37037 3674281 ~ 3676927 (-)
G126369 NA non-coding upstream 607485 4244729 ~ 4245041 (-)
G126428 NA non-coding upstream 1000123 4637367 ~ 4637640 (-)
G126429 NA non-coding upstream 1000714 4637958 ~ 4638285 (-)
G126430 NA non-coding upstream 1003814 4641058 ~ 4641341 (-)
G126096 NA other downstream 464312 3131714 ~ 3149252 (-)
AMCG00000777 coq10b,LOC107690612 other downstream 473075 3133876 ~ 3140489 (-)
AMCG00000771 nabp1,nabp2,LOC106581684,LOC107718374,LOC106575791,LOC107557546 other downstream 563548 3044167 ~ 3050016 (-)
G126089 NA other downstream 571600 3036931 ~ 3041964 (-)
G126017 NA other downstream 1155681 2451868 ~ 2457883 (-)
G126427 NA other upstream 998852 4636096 ~ 4636516 (-)
AMCG00000838 cacnb4,LOC108434427 other upstream 1319894 4957138 ~ 4982651 (-)
G126700 NA other upstream 1935461 5572705 ~ 5573027 (-)
AMCG00000888 LOC102209482 other upstream 3052324 6689568 ~ 6733817 (-)
G127039 LOC100136012,LOC107575789 other upstream 3992671 7629915 ~ 7645722 (-)

Expression


Co-expression Network