G128938


Basic Information

Item Value
gene id G128938
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 15921373 ~ 15921574 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU161646
cgtgtatcaatttctcagtgtcctgtaacgagaggaattgtcttagtctagcaatgtttctaagctggaggaaggaagatctcgacacattctgaatgtgtgattcaaaggatagattatgatcacagatgacacccaggttttgtgccatctccttaggggagaaattaaagttatcattactcagttttgttagtgcatg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU161646 True 202 lncRNA 0.40 1 15921373 15921574

Neighbor

gene id symbol gene type direction distance location
AMCG00001128 adarb1,adarb1b,LOC106581860,LOC106586125,LOC105907970 coding upstream 121216 15754698 ~ 15800157 (+)
AMCG00001125 NA coding upstream 275703 15630714 ~ 15645670 (+)
AMCG00001120 NA coding upstream 391414 15525846 ~ 15529959 (+)
AMCG00001123 NA coding upstream 397173 15518473 ~ 15524200 (+)
AMCG00001122 LOC107673730,LOC107555925,LOC107714219,LOC107741911 coding upstream 402940 15511511 ~ 15518433 (+)
AMCG00001129 traf3ip1 coding downstream 10152 15931726 ~ 15951003 (+)
AMCG00001130 asb1 coding downstream 32141 15953715 ~ 15958009 (+)
AMCG00001135 NA coding downstream 67598 15989172 ~ 16002152 (+)
AMCG00001134 twist2,LOC106586121 coding downstream 86431 16008005 ~ 16008487 (+)
AMCG00001138 NA coding downstream 354861 16276435 ~ 16285796 (+)
G128919 NA non-coding upstream 34771 15566401 ~ 15886602 (+)
G128928 NA non-coding upstream 39074 15881355 ~ 15882299 (+)
G128827 NA non-coding upstream 508266 15412780 ~ 15413107 (+)
G128815 NA non-coding upstream 562359 15358643 ~ 15359014 (+)
G128772 NA non-coding upstream 595153 15325994 ~ 15326220 (+)
G128939 NA non-coding downstream 100 15921674 ~ 15922039 (+)
G128941 NA non-coding downstream 1458 15923032 ~ 15924810 (+)
G128958 NA non-coding downstream 100684 16022258 ~ 16062179 (+)
G129071 NA non-coding downstream 968064 16889638 ~ 16892361 (+)
G129080 NA non-coding downstream 1222616 17144190 ~ 17147069 (+)
AMCG00001114 NA other upstream 457520 15460532 ~ 15463853 (+)
G128823 NA other upstream 500493 15409112 ~ 15420880 (+)
AMCG00001098 NA other upstream 736981 15150275 ~ 15184392 (+)
AMCG00001022 NA other upstream 3536331 12288950 ~ 12385042 (+)
AMCG00001002 myo3b other upstream 3909948 11999664 ~ 12011425 (+)
G129365 zgc:162707,LOC107749877,LOC107592986,LOC107668408,LOC107596553 other downstream 2101486 18023060 ~ 18044251 (+)
G129453 NA other downstream 2624319 18545893 ~ 18547915 (+)
G129442 NA other downstream 2633577 18555151 ~ 18558174 (+)
AMCG00001203 NA other downstream 2966710 18888284 ~ 18889724 (+)
G129594 bzw1a,LOC108414345,LOC105905677,LOC103358003 other downstream 3121730 19043304 ~ 19142145 (+)

Expression


Co-expression Network