AMCG00001410


Basic Information

Item Value
gene id AMCG00001410
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030143.1
NCBI id CM030143.1
chromosome length 20516281
location 2921972 ~ 2922279 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00001410
ATGCTGGAGGAGCTATTAGCTGGAGACAAATTCAAAGATGACATTAAAAACCATGTGAGGCAAGTTCCGCTGTCTGATTCCACAGCAGTACAGAGATTGGAGGTTATTTACGATTTGGACGAATCAAGCGATTTAAGAGGCAGTGCCCCGCTATCACTTTTTTCTAGATTTTATGATGGTGAAATCTTCAAGGAAGACTTTTTATGCTTAATACCATTTGAAATTTACACCAAAGGACAGGTCATTATTGAAAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00001410 True 255 mRNA 0.38 2 2921972 2922279

Neighbor

gene id symbol gene type direction distance location
AMCG00001406 NA coding upstream 264970 2618236 ~ 2657002 (+)
AMCG00001403 tmem178,LOC107691291,LOC105026821,LOC107751123,LOC107570655,LOC106564792 coding upstream 528638 2380244 ~ 2393334 (+)
AMCG00001407 NA coding upstream 703469 2212251 ~ 2218503 (+)
AMCG00001400 NA coding upstream 817427 2076753 ~ 2104545 (+)
AMCG00001399 NA coding upstream 862975 2056887 ~ 2058997 (+)
AMCG00001415 NA coding downstream 497125 3419404 ~ 3420432 (+)
AMCG00001422 NA coding downstream 601059 3523338 ~ 3530730 (+)
AMCG00001420 egln1,LOC107737236,LOC107556149,LOC105893867,LOC107572057 coding downstream 624593 3546872 ~ 3554580 (+)
AMCG00001421 ero1b coding downstream 642241 3564520 ~ 3587440 (+)
AMCG00001439 NA coding downstream 686036 3608315 ~ 3648819 (+)
G157530 NA non-coding upstream 67594 2829073 ~ 2854378 (+)
G157526 NA non-coding upstream 105049 2808377 ~ 2816923 (+)
G157486 slc8a1 non-coding upstream 320525 2595833 ~ 2601447 (+)
G157481 NA non-coding upstream 376827 2544863 ~ 2545145 (+)
G157477 NA non-coding upstream 403981 2517622 ~ 2517991 (+)
G157545 NA non-coding downstream 130889 3053168 ~ 3053443 (+)
G157559 NA non-coding downstream 197851 3120130 ~ 3121289 (+)
G157562 NA non-coding downstream 208944 3131223 ~ 3131716 (+)
G157577 LOC100846954 non-coding downstream 262442 3184721 ~ 3185154 (+)
G157579 NA non-coding downstream 265344 3187623 ~ 3189703 (+)
G157369 NA other upstream 921044 1971881 ~ 2000928 (+)
AMCG00001392 NA other upstream 1226986 1691676 ~ 1694986 (+)
G157196 NA other upstream 2332672 587975 ~ 589300 (+)
AMCG00001436 gng4 other downstream 826275 3748554 ~ 3765362 (+)
G157781 NA other downstream 952930 3875209 ~ 3880779 (+)
AMCG00001433 NA other downstream 1100518 4022797 ~ 4023910 (+)
AMCG00001430 srf other downstream 1123077 4045356 ~ 4062333 (+)
AMCG00001457 NA other downstream 1701188 4623467 ~ 4652000 (+)

Expression


Co-expression Network