AMCG00001584


Basic Information

Item Value
gene id AMCG00001584
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030143.1
NCBI id CM030143.1
chromosome length 20516281
location 8217777 ~ 8223182 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00001584
ATGACCGTCATTAACCCCCAGCTGTCCTCCATGACTGAAACTGTCCCGGGCGAGACGGTGGGGAGGCGGGTGGCGTGTGATGGAGAGCGAGGGACAGTCTGCTATGTTGGCAACGTACCTCCTACCGCAGGGGTCTGGCTTGGTGTGGAGTGGGACAACCCAGAACGAGGCAAACATGACGGGAGCCACGAGGGAGTGCGTCATCCTACCGGTGCATCCTTTATCCGTCCTAAGAAGGCCAGCTTTGGAGTGGACTTCCTGACCGCAGTGAAGCAGCGATATGAGATCGAGAAGGAGGACAGCGGGGAGGGGATGAAGATTTCCACCAAGCCCGTGGAACGGATCGGCTTTGACTCTGTGGCACAGAAACAGAGATTGGAAAGACTGATCCTGTCCAACACTGGCCTGTCTTCTATACAGTTCAGTGACGTGGCTCCAGGCGGCGTACGCTCTTGTAATCCCCAGTGGTCCTTTGTGAACGAGCTGGAGAAGCTGCAGAGCCTTCAGATGCTGTCCTGCTTCAACAACCCCCTGATGACCATGGAGAAGAGCCCAGAGACCGTGAGACAGCTCATCATTGCCAAGATCGCACAGCTGCAGCTGCTCAACAAGTCCAAGGTTGTTCCAGATGAGAGGAAGGGGGCTGAGCTGGACTACAGGAAGATGTTTGGTTTATTGTGGTTGGCGTCCGGCGGGAATCGCGACCCAGAATTAGACAAGCCCAGTCTGGCCTTCATTGCAGAACATCCCCGATACCAGTTCCTCATCCAGAAATACGGTGCCCCGGAAGAAGGCGAACTGAAAGTCCAGCAGCCCTTTGCTCTGAAAAATCAGTTGCTGAgTATAACCTTCATTTGCCCAGATATGACTGAAAAGAAGCCCATTGAAAAGAAGCTCCCAGATTCCATGACCATCCAGAAGGTCAAAGGGCTGCTGTACCGTCTGTTGAAGATTCCTGGCTCTGAGTTAAAGCTCACATACACCAGCTCAAAGATGGAGGGCCGAGAGATCGAGATCGACAACGACCTCAAGCCCCTGCAGTTCTACTCCATCGAAGACGGAGACCGGGTGCTGGTGCGCTGGTCCTGA

Function

GO:

id name namespace
GO:0007023 post-chaperonin tubulin folding pathway biological_process
GO:0044424 obsolete intracellular part cellular_component

KEGG:

id description
K21768 TBCE; tubulin-specific chaperone E

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00001584 True 1089 mRNA 0.54 10 8217777 8223182

Neighbor

gene id symbol gene type direction distance location
AMCG00001596 NA coding downstream 41397 8168846 ~ 8176380 (-)
AMCG00001595 NA coding downstream 54982 8161044 ~ 8162795 (-)
AMCG00001593 mrpl14,LOC107679189,LOC107549148 coding downstream 114220 8101524 ~ 8103557 (-)
AMCG00001569 NA coding downstream 169811 8018604 ~ 8047966 (-)
AMCG00001570 NA coding downstream 211236 7998005 ~ 8006541 (-)
AMCG00001597 map1lc3c,LOC107701141 coding upstream 290780 8513962 ~ 8516067 (-)
AMCG00001598 NA coding upstream 296328 8519510 ~ 8540265 (-)
AMCG00001601 NA coding upstream 411237 8634419 ~ 8651786 (-)
AMCG00001609 NA coding upstream 447828 8671010 ~ 8686429 (-)
AMCG00001607 NA coding upstream 489903 8713085 ~ 8736663 (-)
G158767 NA non-coding downstream 221594 7995974 ~ 7996183 (-)
G158752 NA non-coding downstream 266817 7948348 ~ 7950960 (-)
G158701 NA non-coding downstream 358230 7844507 ~ 7859547 (-)
G158681 NA non-coding downstream 451911 7765629 ~ 7765866 (-)
G158635 NA non-coding downstream 537999 7647716 ~ 7679778 (-)
G158883 NA non-coding upstream 79368 8302550 ~ 8304511 (-)
G158943 NA non-coding upstream 224788 8447970 ~ 8452170 (-)
G158973 NA non-coding upstream 268838 8492020 ~ 8492701 (-)
G158974 NA non-coding upstream 271319 8494501 ~ 8494859 (-)
G158975 NA non-coding upstream 271763 8494945 ~ 8495231 (-)
AMCG00001594 NA other downstream 122051 8092328 ~ 8095726 (-)
AMCG00001557 NA other downstream 421811 7791381 ~ 7795966 (-)
AMCG00001554 NA other downstream 553205 7662091 ~ 7664572 (-)
G158434 actc1a,acta2,LOC103359577,LOC105907633,LOC103457336,LOC107756589,LOC107594158,LOC103374497 other downstream 1441119 6772338 ~ 6776658 (-)
AMCG00001514 NA other downstream 1708073 6507875 ~ 6509704 (-)
AMCG00001583 ggps1,LOC107728322 other upstream 2387 8225569 ~ 8252204 (-)
G158971 map1lc3c,LOC107701141 other upstream 291185 8514367 ~ 8540258 (-)
AMCG00001615 NA other upstream 850907 9074089 ~ 9103034 (-)
AMCG00001625 NA other upstream 1729190 9952372 ~ 9965408 (-)
AMCG00001628 NA other upstream 1989692 10212874 ~ 10221718 (-)

Expression


Co-expression Network