G158537


Basic Information

Item Value
gene id G158537
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030143.1
NCBI id CM030143.1
chromosome length 20516281
location 7023388 ~ 7028141 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU199601
GGGCGCTCTGTGAAAGAGGTGAGATAGAAATGCATATTACAAAGCAGTTTCTATACAGAAGTTTTGTGTAAAGATCGATTATAATGCCTAGGATCAAATGTTTATCTACACTCGATTATTACAGTCTGAAGATCGTCCTGGAGGGGATATACTGCGCTGCGCATTATAGATGAAGTAACTCGGACAGTTAACGTCCGGTGTAGCGGGATGGTTGTTCAAAATCATTCCCTTTTCAGGCACAGCACTGGAACCGGACCGACCGAGGACTGATGCTCTGCAGAAACCCAGCAGAGAGCAGCTGCGAGGTCAACCACAGAGTGTCACTGTGCTGCTTGTGCCGTGTCTCTGTACTCGCTGTATACACATGACCTCCCTCTGGATCTGTCCAATTGTAGTCCAGCCGTGTTTGCGGATTGTTGTCAGGAAACGAATTGGCACCTGCTATATGCTCAGAAGGATTGCAAAATATAGGCCAGAGCAACTTCTAAATCTGCATAAATTCATAGCCAAATTAAGTCCTGCTCTGTCGTCTGGAGTAATGCTAGTGTTGGTGACCTAAAGAGACTGCAGATCGCATTTTAGAATAAGGCAGCCAGGATGGGTCTGCAATGCGGTTTCGAAATTGTCAAGAAACCGAAGagctcgtacaacgctgtgtactactcccttcacagaacagcgcaaactggctctaacacCAGtgtcaacgtcaacagtgaagaggcgactccgggatgctggccttctaggcagacttgcaaagaaaaaaacacatctcagactggcaaataaaaagaaaatattaagttgggcaaaagaacacagagactggacagaggaagattggaaaaaagtgttacgGACGGaagaatctaagtttgaggtgttcagatcacaaagaagaacattcgtcaGACGCAGACtgaatgaaaagatgctggaggagagcttgacgccatctgtcaagcatggtggaggcaatgtgatggtctgggggtgctttggtggtggtaaagtgggagatttgtacagggtaaaagggatcttgaagaaggaaggctatcactccattttgcaacgccatgccatacccaGTGGACtgtgcttgattggagccagtttccaaatacaacaggacaatgacccaaagcacagctccaaactatgcaagaactttttagggaagaagcagtcagctggtattctgtctataatggagtggccagcacagtcaccggatctcaaccctattgagctgttgtgggagcagcttgaccgtatgGTACTGAACCAACAGGCATTGTGTACAGCTGAGTGGCCAGAAGGATGACTAGAGAACGAAAGGGGATATTCCAGGGAGAGATGAGTGGCTGAAGAGAAGGAAGAGAACAAGAGTTTCCAATTGGATGTGAGCATTGAAGACTAGCAGTGAAGTGTATTGCCACCCCACAGCACCATCAATGCACCATAGACTAGGATAGGATACAGGGGATACTggaattgttttctttcttattaatTATAACTGTGTTCTCATTCTCTTGAATTCTTTTTAACCCTTTCTAGTGTTTTATAATACAGCCCTGGAGTTTGAGACTAGTGTAAAGGTTCAATCAAATCtaggaaacacagaaaaaaggaaaaaaagatctataaaacatttaacaaactgCAGTTCTCTGCAGGTAATTATGTAGTAAGCAGCAAGGTTTCCTCAGaatgaatgtttatttaaagaaaaaacatggtACATTCTCTTGCATCAGAAAGCCCTTTTATAGAATGCAAACACTTAACCTGTTTATGCACCCATGCCAccaaataacactttaaaaacataaataatcaaaaatagACAAAAGATAGATAGGCCAAGAAATACATGctttaaaacttttaatttaagatCATATATAGACTTCACATACTGTAATTGCGATTCCAATTAGGCCATATAGCCAGCTAAACATGGGTGAACAAAAACTGTACAGTggcatataaataaatccagtgtagagttttgttttaagttttacatCATGGTACGATGTGTTTATCAGTTCCATTATGAATCTATCAGAGATAGTGGATCACATGCAAAAATATTCCATACAATATATAACAGCTAGCGGAAAAACATACAGCCCAGTAATCGACAAACGGGAATAAAGTTTCAATGTTTCAGTGCATCCATAGGAGTGATTCACATGATCGTGTATTTTGTGAGCAGATTGCAGACTTGTACTATCATTATGACAGAAATGTAGGCTTATCATACCCTGttgcaatgaaaagaaaagcacagacTAATGAAATGGCCTACCTGAATCTGGGAGTGTCTTTAAGACGATCTTCGAAGACCACAATCCCGTTCATGCTGTTGAGATGTCCTGGATATGCTGAAATTACTCTCAGGTAATCTAGCCTCTCTCTTTAGAATTATTGGgctcacaataaaaacaatgaccaaCCGCTGAGTCTCCAAACAGCGACTGAGTTAATGAAAGATTTCCAAAGCAAGTAAACCGATATCATAAGAACATCAGTTTACAAATGATGttagcatttatatatttatttataggttCATTTAATTGTTGAAATTCCATCTGGCTACCTGCCGAGGAAGATggctgagttttgttttttctcattgcAAAATTGAATATTTCATCAGATCCCTCTTTTGTTACAAACAAAGAGCACTCACACAACCCATCTGAGAGCACAGGGGACACAATGGCTGTACCATCAGAATGTGTCATATGTTTCCTAGATGTTTTAACTTGAACCATATGTTGTCAGAGCTTTGGGCGAacacagtgtgtgtggtgtgtttatatataaaagtctCTTATTTCTCCTCTTTAATTCCTACATGTGAGATTGGGATCcaattaataattacaaatgagaAATTCTTTAATTTCCCAGAAGTTACAGCAACACAGTTTTCCACTGAAACCAAATTCATAGAAGACTTGGGGAATAATGAGgccagtggcggttctagaccATTTCAGCTGGGGGGGCCTGGCCGGGGCCAGTTGTATTATAGGGGGGGCCATCATCATCCCTGCTGTTCG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU199601 True 3086 TUCP 0.41 3 7023388 7028141

Neighbor

gene id symbol gene type direction distance location
AMCG00001541 NA coding upstream 2570 7016929 ~ 7020818 (+)
AMCG00001532 NA coding upstream 8051 7011905 ~ 7015337 (+)
AMCG00001531 ppm1g,LOC107660231 coding upstream 12673 7000441 ~ 7010715 (+)
AMCG00001529 LOC107717858 coding upstream 80242 6937347 ~ 6943146 (+)
AMCG00001528 NA coding upstream 149293 6871764 ~ 6874095 (+)
AMCG00001542 adss,LOC107666526,LOC107375820,LOC107733748 coding downstream 84511 7112652 ~ 7133015 (+)
AMCG00001536 NA coding downstream 242277 7270418 ~ 7296604 (+)
AMCG00001535 akt3,LOC107747540,LOC105912451,LOC107666430,LOC107698756 coding downstream 272049 7300190 ~ 7305321 (+)
AMCG00001539 NA coding downstream 363932 7392073 ~ 7410053 (+)
AMCG00001540 NA coding downstream 393669 7421810 ~ 7452801 (+)
G158435 NA non-coding upstream 234416 6787404 ~ 6788972 (+)
G158364 NA non-coding upstream 513758 6509294 ~ 6509630 (+)
G158342 NA non-coding upstream 601153 6422000 ~ 6422235 (+)
G158337 NA non-coding upstream 612831 6409021 ~ 6410557 (+)
G158332 NA non-coding upstream 625200 6396920 ~ 6398188 (+)
G158539 NA non-coding downstream 46 7028187 ~ 7036066 (+)
G158548 NA non-coding downstream 27707 7055848 ~ 7056061 (+)
G158555 NA non-coding downstream 130109 7158250 ~ 7160609 (+)
G158571 NA non-coding downstream 141392 7169533 ~ 7169767 (+)
G158580 NA non-coding downstream 284003 7312144 ~ 7313758 (+)
G158478 NA other upstream 146810 6874768 ~ 6876578 (+)
AMCG00001509 sf3b5 other upstream 627428 6394103 ~ 6395960 (+)
AMCG00001493 NA other upstream 1122390 5889836 ~ 5900998 (+)
AMCG00001489 NA other upstream 1151958 5869975 ~ 5871430 (+)
AMCG00001486 NA other upstream 1390039 5593680 ~ 5633349 (+)
AMCG00001550 NA other downstream 643173 7671314 ~ 7679783 (+)
G158672 NA other downstream 708374 7736515 ~ 7737890 (+)
G158676 NA other downstream 718540 7746681 ~ 7746980 (+)
G158725 kat14,LOC106584902 other downstream 905015 7933156 ~ 7933555 (+)
G158836 NA other downstream 1131005 8159146 ~ 8161815 (+)

Expression


Co-expression Network