AMCG00001535 (akt3,LOC107747540,LOC105912451,LOC107666430,LOC107698756)


Basic Information

Item Value
gene id AMCG00001535
gene name akt3,LOC107747540,LOC105912451,LOC107666430,LOC107698756
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030143.1
NCBI id CM030143.1
chromosome length 20516281
location 7300190 ~ 7305321 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00001535
ATGGCTGCTGGAGATGTATTGGTGATCGTCACGGCCCGGGTGTTGAAAGTCCTTTCTGCCTCTTGTTATTGTCCTCCACACCACAAGGAGAAGAAAGGAGTGGGCGTAGCGTGCCGTGCTGACAGCGCCGAGCTGGCTGTTCCTCTCGGAGCCCTGCTGGGGGACGCAGTGCTGGTGGAGCCACAGGCTTTCTCACAGCCAGCACTGCCAAGGGGCCGCTCTTCTGAGCAGCAGCCCCGCCACATGGCCGGCAGAGCGGGCCGGCTCCTTCCCGGAAGGCTAGCCACTGTCCCTATGGCTTTGGAACAGGGGGTGCTGGAGGACAACGACTACGGCCGGGCGGTGGACTGGTGGGGGCTAGGCGTGGTGATGTATGAGATGATGTGCGGCCGGCTGCCCTTCTACAACCAGGACCACGAGAAGCTCTTTGAACTCATCCTAATGGAGGATATTAAATTCCCCAGGACACTGTCCAGCGATGCAAAATCACTACTGTCGGGCCTCCTCATCAAGGACCCCAACAAAAGACTTGGCGGTGGTCCAGATGATGCAAAAGAAATCATGCGCCACAGTTTTTTCGCAGGAATAAACTGGCAAGATGTGTATGATAAAAAGCTGATACCTCCTTTTAAGCCTCAGGTGTCCTCGGAGACAGATACCAGATATTTCGATGAAGAATTCACAGCCCAGACGATTACAATAACTCCTCCTGAAAAATTTGATGAAGACGGCATGGACTGCATGGACAACGAGCGGCGGCCCCACTTCCCTCAGTTCTCGTACTCCGCCAGCGGCCGGGAGTAG

Function

symbol description
akt3 Enables ATP binding activity and protein serine/threonine kinase activity. Involved in several processes, including negative regulation of cellular senescence; positive regulation of cell migration involved in sprouting angiogenesis; and positive regulation of vascular endothelial cell proliferation. Predicted to be located in cytoplasm; membrane; and nucleus. Implicated in colon cancer; glioblastoma; prostate adenocarcinoma; prostate cancer; and renal cell carcinoma. Biomarker of lung non-small cell carcinoma; malignant astrocytoma; and pancreatic adenocarcinoma.

NR:

description
PREDICTED: RAC-gamma serine/threonine-protein kinase isoform X3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00001535 True 804 mRNA 0.56 6 7300190 7305321

Neighbor

gene id symbol gene type direction distance location
AMCG00001536 NA coding upstream 3586 7270418 ~ 7296604 (+)
AMCG00001542 adss,LOC107666526,LOC107375820,LOC107733748 coding upstream 167175 7112652 ~ 7133015 (+)
AMCG00001541 NA coding upstream 279372 7016929 ~ 7020818 (+)
AMCG00001532 NA coding upstream 284853 7011905 ~ 7015337 (+)
AMCG00001531 ppm1g,LOC107660231 coding upstream 289475 7000441 ~ 7010715 (+)
AMCG00001539 NA coding downstream 86752 7392073 ~ 7410053 (+)
AMCG00001540 NA coding downstream 116489 7421810 ~ 7452801 (+)
AMCG00001548 NA coding downstream 225625 7530946 ~ 7549993 (+)
AMCG00001559 LOC105902337 coding downstream 381063 7686384 ~ 7688398 (+)
AMCG00001558 gtpbp2,LOC108263131,LOC107751133,LOC102796526 coding downstream 390967 7696288 ~ 7710825 (+)
G158571 NA non-coding upstream 130423 7169533 ~ 7169767 (+)
G158555 NA non-coding upstream 139581 7158250 ~ 7160609 (+)
G158548 NA non-coding upstream 244129 7055848 ~ 7056061 (+)
G158539 NA non-coding upstream 264124 7028187 ~ 7036066 (+)
G158435 NA non-coding upstream 511218 6787404 ~ 6788972 (+)
G158580 NA non-coding downstream 6823 7312144 ~ 7313758 (+)
G158621 NA non-coding downstream 269593 7574914 ~ 7575132 (+)
G158631 NA non-coding downstream 356263 7661584 ~ 7664572 (+)
G158667 NA non-coding downstream 422229 7727550 ~ 7728815 (+)
G158668 NA non-coding downstream 424232 7729553 ~ 7731701 (+)
G158537 NA other upstream 272049 7023388 ~ 7028141 (+)
G158478 NA other upstream 423612 6874768 ~ 6876578 (+)
AMCG00001509 sf3b5 other upstream 904230 6394103 ~ 6395960 (+)
AMCG00001493 NA other upstream 1399192 5889836 ~ 5900998 (+)
AMCG00001489 NA other upstream 1428760 5869975 ~ 5871430 (+)
AMCG00001550 NA other downstream 365993 7671314 ~ 7679783 (+)
G158672 NA other downstream 431194 7736515 ~ 7737890 (+)
G158676 NA other downstream 441360 7746681 ~ 7746980 (+)
G158725 kat14,LOC106584902 other downstream 627835 7933156 ~ 7933555 (+)
G158836 NA other downstream 853825 8159146 ~ 8161815 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01180000_09251775_09267204 AKT3A, AKT3 coding CI01180000 null 9251072 ~ 9267256 (+)