G158631


Basic Information

Item Value
gene id G158631
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030143.1
NCBI id CM030143.1
chromosome length 20516281
location 7661584 ~ 7664572 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU199723
AAAATACTGTGTTACAGTAGACATACACCCATGAGCAAAATGTTACATACTGTAGTACCGTGTGAGGTTGCCAAGGTGTTGGGCTCTTTAAACAGGCTGGCCTAGGGAGACAGACATACAAAGACAAAGACTATGGTGCAAAGGAGGCAATTTATGATTGACAGTGCCGGGTGATGGTGTAGAAAAACTGAACCAAAACCCTAGCTCTTTACCAAGCCAAACTATAATCTTCAGATCCCAGTCTATGTCAGGCAGGAGCAGACCAAATCAATATTCACATCCAAGTCCATACGCAAAGGTTTGAGGTCAGTATTCTTCACTTGGTGCAACAACCAACCCAAGCTCTGCTTCCTGGATTACGTCAGATGTATTCTCTTTGTCCTAAAACAGTCACTCCTCTGAATTCAATAGAAAAACGCATGGTATGCACAggggtgtgtatgtatgcatgcatgcatgtcaATGCACCACTATCTCTGCGGTTAGTGTCCTCCCAGGAGTTTGACCAGACTATCAACTTCCCACACAGAGACAGTTTCTCACTTGCAGCACCACACTGAAGAGAAATTAAATACTCAAGTACAGTTAAAATGGATTTATTGCCCAATTTTGTAGGGCAAATTAGTTAAGGATACAACATTACAGATTTCACAACACCCAGACTAGTATACACTTTTCAATAGGTTTTCtaatacttttaaaactttgaccTTGGAAAAACAGTTATTAACAAAAGTGCCTAGTCTGGGAAATTGATCAGACCTCAATCCACACATCAACAGCTCAATTAGGCTCCAGGCAGGACAGTATCCATTCTCAGAGCAGATTTTGAACGTCCAGACTGAAGTTTGAATTGCACAATGGTTGTCTTTACAAAGCAGGGTTTGGCAAGATATACAACACTAAAATTATAATACTAGGCTCTAAATCAAAACGCAGTTAActacatggggggggggggggggggggggggggtgaaactGGTATAGCATTTTTTGCATTCCATAGGGTAACAGGATACAGATATTTagaatgtttatttgaaataattattaggTTGCTTCACTTACAATAagaccacacacaaaaaaagccatCTTAACAGTGGGGATGCAGATCAATGCAGTATTGTTAAAGCAGTCATCCGTTTGCCTGGTCTTATTCACTTGCACATTTTCGTTGTTAGCCTGGTGTCAGGAAGCCAAGGACGGGACCACACTTCAAAGGTACAGGTGAGAGTCTGTAACCTTTGCAACTTTCTGTAAAGCGCACATCCCCAAATCTTTCACACTTCCCTTTTTGCAAGATGTGCAGCCTATCTTCACTGTGAAGGAGTACTTCATCCCTTCAACAACTGTTCCGTAGCATCAATGACATTAATCACTTTTCTGGCAAACGTGTCGATGCTGGCCTTGTTATACTCGGATACTGCGAATTTCAGAGCATTTTTGACTAGGGGGTCGGTAAGGTCTGCTTTCGTGACCCCCCCGGGCATAGAGCCTGCCAAANNN

Function

GO: NA

KEGG:

id description
ko04114 Oocyte meiosis

RNA

RNA id representative length rna type GC content exon number start site end site
TU199723 True 1511 lncRNA 0.42 3 7661584 7664572

Neighbor

gene id symbol gene type direction distance location
AMCG00001548 NA coding upstream 111591 7530946 ~ 7549993 (+)
AMCG00001540 NA coding upstream 208783 7421810 ~ 7452801 (+)
AMCG00001539 NA coding upstream 251531 7392073 ~ 7410053 (+)
AMCG00001535 akt3,LOC107747540,LOC105912451,LOC107666430,LOC107698756 coding upstream 356263 7300190 ~ 7305321 (+)
AMCG00001536 NA coding upstream 364980 7270418 ~ 7296604 (+)
AMCG00001559 LOC105902337 coding downstream 21812 7686384 ~ 7688398 (+)
AMCG00001558 gtpbp2,LOC108263131,LOC107751133,LOC102796526 coding downstream 31716 7696288 ~ 7710825 (+)
AMCG00001560 NA coding downstream 54222 7718794 ~ 7720111 (+)
AMCG00001556 LOC104967701 coding downstream 110270 7774842 ~ 7792880 (+)
AMCG00001571 NA coding downstream 189572 7854144 ~ 7859415 (+)
G158621 NA non-coding upstream 86452 7574914 ~ 7575132 (+)
G158580 NA non-coding upstream 347826 7312144 ~ 7313758 (+)
G158571 NA non-coding upstream 491817 7169533 ~ 7169767 (+)
G158555 NA non-coding upstream 500975 7158250 ~ 7160609 (+)
G158548 NA non-coding upstream 605523 7055848 ~ 7056061 (+)
G158667 NA non-coding downstream 62978 7727550 ~ 7728815 (+)
G158668 NA non-coding downstream 64981 7729553 ~ 7731701 (+)
G158671 NA non-coding downstream 70704 7735276 ~ 7735610 (+)
G158673 NA non-coding downstream 76054 7740626 ~ 7741056 (+)
G158675 NA non-coding downstream 78986 7743558 ~ 7744033 (+)
G158537 NA other upstream 633443 7023388 ~ 7028141 (+)
G158478 NA other upstream 785006 6874768 ~ 6876578 (+)
AMCG00001509 sf3b5 other upstream 1265624 6394103 ~ 6395960 (+)
AMCG00001493 NA other upstream 1760586 5889836 ~ 5900998 (+)
AMCG00001489 NA other upstream 1790154 5869975 ~ 5871430 (+)
AMCG00001550 NA other downstream 6742 7671314 ~ 7679783 (+)
G158672 NA other downstream 71943 7736515 ~ 7737890 (+)
G158676 NA other downstream 82109 7746681 ~ 7746980 (+)
G158725 kat14,LOC106584902 other downstream 268584 7933156 ~ 7933555 (+)
G158836 NA other downstream 494574 8159146 ~ 8161815 (+)

Expression


Co-expression Network