XLOC_005927 (mtg1)


Basic Information

Item Value
gene id XLOC_005927
gene name mtg1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007124.7
NCBI id CM002897.2
chromosome length 52186027
location 21674445 ~ 21682876 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00011688
ACAACACAGAAGAAGTGTGGCCTCAGTGCAAGCGTGATGTTTATCACGGTGTCTTAAATTAATCTAACTCGTTCACTTGTGCGATATTGTTAAATTATTGTGTTCATCTTGGAAATACACTGATTGCGACTGCACACGATGAGAATTTATCATTCCTTACTTAATGCTGCAAAGTTTAGGAGTGTGTTTGACTTTGGTGAGCGCGATGTGACGCACTGGTTCCCTAGACATATGGCTAAAGGACTCAAGCAGATGAGAGCCAATCTAAGAAATGTTGACTGCATTATTGAGATCCACGATGCTAGAATATCCTTTTTTAATGAAGAAATTCCTCATTTCAGGAGAGTCTTGATGTCCGGCCACACTTACTTGTACTGAACAAGATGGATGTGGCAGACATATCGAAAAAGCAGAGTATTCTGAAGCAGTTTgagagagagggtgtgaaaaatgttttatttacagacTGTTTAAGACAACATGATGAGAATGTAAAAAAGcatccTGTCATTCGCTGTCTGATGTTCCAGATTGTTCCTCTCGTGTCGAAGCTGATAGAAAGTACATCACGTTTTCACAGGGAAGAGGAAAGATGTTACTGCCTGATGGTCATTGGTGTGCCAAATGTGGGAAAATCATCACTGATTAATGCTTTAAGGAGGACATATTTGAAAAAAGGCAAAGCTTCAAAAGTCGGAGCTGAACCAGGCATTACAAAGGCTGTCCTGACTAAAATTCAGGTCTGTGAGAGACCCATAATTCATTTACTGGACACACCAGGAGTTCTTCCACCTAGAATAGAAAACATAGAGACGGGAATGAAACTTGCTTTATGTGGTACGGTTTTGGACCATTTAGTTGGTGAGGATGTCATTGCAGATTTTCTGCTTTTTTCATTGAACAGACTAGAAAGATTTAGTTATGTAGAGAAGTACAGTCTTGAAGAGCCTTGTGATGATATTCAACATGTACTGAAGTGTATAGCAGTGAAACTTGGCAAGACCAGACGTGTAAAGGCCATCACTGGTGTTGGCAACATCACGGTGCAGTTGCCAGACTACAGTGCAGCAGCCTATGATTTCATCAGAGCGTTCCGGAAAGGAGAACTTGGAAAAGTAATGCTTGACTAATCAAATGTTTAATAGCAGATTGGTAATTATTATTGCTTTGAAAGCTTGACCTTCAGTCAAGACTGAACACTTGAGAAGCACTTAATACTTTTGATGTTTTAATTAAAAGGTTGTGCGCATGGTATCTTTGACACATCTTTGCTTTTATTGTGTAGTTATTAGAAAAAGTGCATTGAATATATTCTTTTTTGATTACTGCATAAGTTACAATACATTATTCAGTCTCAATT
>TCONS_00011689
ACAGAAGAAGTGTGGCCTCAGTGCAAGCGTGATGTTTATCACGGTGTCTTAAATTAATCTAACTCGTTCACTTGTGCGATATTCTTGGTTTATTGTGTTCATCTTGGAAATACACTGATTGCGACTGCACACGATGAGAATTTATCATTCCTTACTTAATGCTGCAAAGTTTAGGAGTGTGTTTGACTTTGGTGAGCGCGATGTGACGCACTGGTTCCCTAGACATATGGCTAAAGGACTCAAGCAGATGAGAGCCAATCTAAGAAATGTTGACTGCATTATTGAGATCCACGATGCTAGAATATCCTTTTTTAATGGAAGAAATCTTACATTTCTAAATGATTAAATTCCAATGATTTTCTTTAACTGGCCAACATACCCTTTTCAGGAAGAAATTCCTCATTTCAGGAGAGTCTTGATGTCCGGCCACACTTACTTGTACTGAACAAGATGGATGTGGCAGACATATCGAAAAAGCAGAGTATTCTGAAGCAGTTTgagagagagggtgtgaaaaatgttttatttacagacTGTTTAAGACAACATGATGAGAATGTAAAAAAGATTGTTCCTCTCGTGTCGAAGCTGATAGAAAGTACATCACGTTTTCACAGGGAAGAGGAAAGATGTTACTGCCTGATGGTCATTGGTGTGCCAAATGTGGGAAAATCATCACTGATTAATGCTTTAAGGAGGACATATTTGAAAAAAGGCAAAGCTTCAAAAGTCGGAGCTGAACCAGGCATTACAAAGGCTGTCCTGACTAAAATTCAGGTCTGTGAGAGACCCATAATTCATTTACTGGACACACCAGGAGTTCTTCCACCTAGAATAGAAAACATAGAGACGGGAATGAAACTTGCTTTATGTGGTACGGTTTTGGACCATTTAGTTGGTGAGGATGTCATTGCAGATTTTCTGCTTTTTTCATTGAACAGACTAGAAAGATTTAGTTATGTAGAGAAGTACAGTCTTGAAGAGCCTTGTGATGATATTCAACATGTACTGAAGTGTATAGCAGTGAAACTTGGCAAGACCAGACGTGTAAAGGCCATCACTGGTGTTGGCAACATCACGGTGCAGTTGCCAGACTACAGTGCAGCAGCCTATGATTTCATCAGAGCGTTCCGGAAAGGAGAACTTGGAAAAGTAATGCTTGACTAATCAAATGTTTAATAGCAGATTGGTAATTATTATTGCTTTGAAAGCTTGACCTTCAGTCAAGACTGAACACTTGAGAAGCACTTAATACTTTTGATGTTTTAATTAAAAGGTTGTGCGCATGGTATCTTTGACACATCTTTGCTTTTATTGTGTAGTTATTAGAAAAAGTGCATTGAATATATTCTTTTTTGATTACTGCATAAGTTACAATACATTATTCAGTCTCAATTG
>TCONS_00011690
cttGTGCGATATTCTTGGTTTATTGTGTTCATCTTGGAAATACACTGATTGCGACTGCACACGATGAGAATTTATCATTCCTTACTTAATGCTGCAAAGTTTAGGAGTGTGTTTGACTTTGGTGAGCGCGATGTGACGCACTGGTTCCCTAGACATATGGCTAAAGGACTCAAGCAGATGAGAGCCAATCTAAGAAATGTTGACTGCATTATTGAGATCCACGATGCTAGACCTTTTCAGGAAGAAATTCCTCATTTCAGGAGAGTCTTGATGTCCGGCCACACTTACTTGTACTGAACAAGATGGATGTGGCAGACATATCGAAAAAGCAGAGTATTCTGAAGCAGTTTgagagagagggtgtgaaaaatgttttatttacagacTGTTTAAGACAACATGATGAGAATGTAAAAAAGATTGTTCCTCTCGTGTCGAAGCTGATAGAAAGTACATCACGTTTTCACAGGGAAGAGGAAAGATGTTACTGCCTGATGGTCATTGGTGTGCCAAATGTGGGAAAATCATCACTGATTAATGCTTTAAGGAGGACATATTTGAAAAAAGGCAAAGCTTCAAAAGTCGGAGCTGAACCAGGCATTACAAAGGCTGTCCTGACTAAAATTCAGGTCTGTGAGAGACCCATAATTCATTTACTGGACACACCAGGAGTTCTTCCACCTAGAATAGAAAACATAGAGACGGGAATGAAACT
>TCONS_00011692
cttGTGCGATATTCTTGGTTTATTGTGTTCATCTTGGAAATACACTGATTGCGACTGCACACGATGAGAATTTATCATTCCTTACTTAATGCTGCAAAGTTTAGGAGTGTGTTTGACTTTGGTGAGCGCGATGTGACGCACTGGTTCCCTAGACATATGGCTAAAGGACTCAAGCAGATGAGAGCCAATCTAAGAAATGTTGACTGCATTATTGAGATCCACGATGCTAGACCTTTTCAGGAAGAAATTCCTCATTTCAGGAGAGTCTTGATGTCCGGCCACACTTACTTGTACTGAACAAGATGGATGTGGCAGACATATCGAAAAAGCAGAGTATTCTGAAGCAGTTTgagagagagggtgtgaaaaatgttttatttacagacTGTTTAAGACAACATGATGAGAATGTAAAAAAGcatccTGTCATTCGCTGTCTGATGTTCCAGATTGTTCCTCTCGTGTCGAAGCTGATAGAAAGTACATCACGTTTTCACAGGGAAGAGGAAAGATGTTACTGCCTGATGGTCATTGGTGTGCCAAATGTGGGAAAATCATCACTGATTAATGCTTTAAGGAGGACATATTTGAAAAAAGGCAAAGCTTCAAAAGTCGGAGCTGAACCAGGCATTACAAAGGCTGTCCTGACTAAAATTCAGGTCTGTGAGAGACCCATAATTCATTTACTGGACACACCAGGAGTTCTTCCACCTAGAATAGAAAACATAGAGACGGGAATGAAACTTGCTTTATGTGGTACGGTTTTGGACCATTTAGTTGGTGAGGATGTCATTGCAGATTTTCTGCTTTTTTCATTGAACAGACTAGAAAGATTTAGTTATGTAGAGAAGTACAGTCTTGAAGAGCCTTGTGATGATATTCAACATGTACTGAAGTGTATAGCAGTGAAACTTGGCAAGACCAGACGTGTAAAGGCCATCACTGGTGTTGGCAACATCACGGTGCAGTTGCCAGACTACAGTGCAGCAGCCTATGATTTCATCAGAGCGTTCCGGAAAGGAGAACTTGGAAAAGTAATGCTTGACTAATCAAATGTTTAATAGCAGATTGGTAATTATTATTGCTTTGAAAGCTTGACCTTCAGTCAAGACTGAACACTTGAGAAGCACTTAATACTTTTGATGTTTTAATTAAAAGGTTGTGCGCATGGTATCTTTGACACATCTTTGCTTTTATTGTGTAGTTATTAGAAAAAGTGCATTGAATATATTCTTTTTTGATTACTGCATAAGTTACAATACATTATTCAGTCTCAATTGAA
>TCONS_00011691
cttGTGCGATATTCTTGGTTTATTGTGTTCATCTTGGAAATACACTGATTGCGACTGCACACGATGAGAATTTATCATTCCTTACTTAATGCTGCAAAGTTTAGGAGTGTGTTTGACTTTGGTGAGCGCGATGTGACGCACTGGTTCCCTAGACATATGGCTAAAGGACTCAAGCAGATGAGAGCCAATCTAAGAAATGTTGACTGCATTATTGAGATCCACGATGCTAGAATATCCTTTTTTAATGGAAGAAATCTTACATTTCTAAATGATTAAATTCCAATGATTTTCTTTAACTGGCCAACATACCCTTTTCAGGAAGAAATTCCTCATTTCAGGAGAGTCTTGATGTCCGGCCACACTTACTTGTACTGAACAAGATGGATGTGGCAGACATATCGAAAAAGCAGAGTATTCTGAAGCAGTTTgagagagagggtgtgaaaaatgttttatttacagacTGTTTAAGACAACATGATGAGAATGTAAAAAAGATTGTTCCTCTCGTGTCGAAGCTGATAGAAAGTACATCACGTTTTCACAGGGAAGAGGAAAGATGTTACTGCCTGATGGTCATTGGTGTGCCAAATGTGGGAAAATCATCACTGATTAATGCTTTAAGGAGGACATATTTGAAAAAAGGCAAAGCTTCAAAAGTCGGAGCTGAACCAGGCATTACAAAGGCTGTCCTGACTAAAATTCAGGTCTGTGAGAGACCCATAATTCATTTACTGGACACACCAGGAGTTCTTCCACCTAGAATAGAAAACATAGAGACGGGAATGAAACTTGCTTTATGTGGTACGGTTTTGGACCATTTAGTTGGTGAGGATGTCATTGCAGATTTTCTGCTTTTTTCATTGAACAGACTAGAAAGATTTAGTTATGTAGAGAAGTACAGTCTTGAAGAGCCTTGTGATGATATTCAACATGTACTGAAGTGTATAGCAGTGAAACTTGGCAAGACCAGACGTGTAAAGGCCATCACTGGTGTTGGCAACATCACGGTGCAGTTGCCAGACTACAGTGCAGCAGCCTATGATTTCATCAGAGCGTTCCGGAAAGGAGAACTTGGAAAAGTAATGCTTGACTAATCAAATGTTTAATAGCAGATTGGTAATTATTATTGCTTTGAAAGCTTGACCTTCAGTCAAGACTGAACACTTGAGAAGCACTTAATACTTTTGATGTTTTAATTAAAAGGTTGTGCGCATGGTATCTTTGACACATCTTTGCTTTTATTGTGTAGTTATTAGAAAAAGTGCATTGAATATATTCTTTTTTGATTACTGCATAAGTTACAATACATTATTCAGTCTCAATTGAA
>TCONS_00011693
TCTTGATGTCCGGCCACACTTACTTGTACTGAACAAGATGGATGTGGCAGACATATCGAAAAAGCAGAGTATTCTGAAGCAGTTTgagagagagggtgtgaaaaatgttttatttacagacTGTTTAAGACAACATGATGAGAATGTAAAAAAGATTGTTCCTCTCGTGTCGAAGCTGATAGAAAGTACATCACGTTTTCACAGGGAAGAGGAAAGATGTTACTGCCTGATGGTCATTGGTGTGCCAAATGTGGGAAAATCATCACTGATTAATGCTTTAAGGAGGACATATTTGAAAAAAGGCAAAGCTTCAAAAGTCGGAGCTGAACCAGGCATTACAAAGGCTGTCCTGACTAAAATTCAGGTCTGTGAGAGACCCATAATTCATTTACTGGACACACCAGGAGTTCTTCCACCTAGAATAGAAAACATAGAGACGGGAATGAAACTTGCTTTATGTGGTACGGTTTTGGACCATTTAGTTGGTGAGGATGTCATTGCAGATTTTCTGCTTTTTTCATTGAACAGACTAGAAAGATTTAGTTATGTAGAGAAGTACAGTCTTGAAGAGCCTTGTGATGATATTCAACATGTACTGAAGTGTATAGCAGTGAAACTTGGCAAGACCAGACGTGTAAAGGCCATCACTGGTGTTGGCAACATCACGGTGCAGTTGCCAGACTACAGTGCAGCAGCCTATGATTTCATCAGAGCGTTCCGGAAAGGAGAACTTGGAAAAGTAATGCTTGACTAATCAAATGTTTAATAGCAGATTGGTAATTATTATTGCTTTGAAAGCTTGACCTTCAGTCAAGACTGAACACTTGAGAAGCACTTAATACTTTTGATGTTTTAATTAAAAGGTTGTGCGCATGGTATCTTTGA

Function

symbol description
mtg1 Predicted to enable GTPase activity. Predicted to be active in mitochondrion. Orthologous to human MTG1 (mitochondrial ribosome associated GTPase 1).

GO:

id name namespace
GO:0005739 mitochondrion cellular_component
GO:0003924 GTPase activity molecular_function
GO:0005525 GTP binding molecular_function

KEGG:

id description
ko03009 Ribosome biogenesis
ko03029 Mitochondrial biogenesis

ZFIN:

id description
ZDB-GENE-031110-2 Predicted to enable GTPase activity. Predicted to be active in mitochondrion. Orthologous to human MTG1 (mitochondrial ribosome associated GTPase 1).

Ensembl:

ensembl_id ENSDARG00000069386

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00011688 False 1360 mRNA 0.39 12 21674445 21682873
TCONS_00011689 False 1398 mRNA 0.38 11 21674450 21682874
TCONS_00011690 False 715 mRNA 0.41 8 21676235 21680891
TCONS_00011692 False 1282 mRNA 0.39 11 21676235 21682876
TCONS_00011691 False 1330 mRNA 0.38 10 21676235 21682876
TCONS_00011693 True 885 mRNA 0.40 9 21677767 21682774

Neighbor

gene id symbol gene type direction distance location
XLOC_005926 sh2d4ba coding upstream 52589 21600946 ~ 21621856 (+)
XLOC_005925 NA coding upstream 255494 21418611 ~ 21418951 (+)
XLOC_005924 BX000463.1 coding upstream 815018 20856611 ~ 20859427 (+)
XLOC_005923 BX000463.2 coding upstream 871312 20707546 ~ 20803133 (+)
XLOC_005922 ccdc172 coding upstream 1139497 20524921 ~ 20534948 (+)
XLOC_005928 NA coding downstream 4352 21687228 ~ 21693578 (+)
XLOC_005929 chchd1 coding downstream 85571 21768447 ~ 21776678 (+)
XLOC_005930 si:ch211-51a6.2 coding downstream 97099 21779975 ~ 21822894 (+)
XLOC_005931 zswim8 coding downstream 143220 21826096 ~ 21886312 (+)
XLOC_005932 ndst2a coding downstream 205338 21888214 ~ 22095934 (+)
XLOC_005920 NA non-coding upstream 1157141 20384123 ~ 20517304 (+)
XLOC_005933 BX649358.1 non-coding downstream 367307 22050183 ~ 22050309 (+)
XLOC_005936 BX649262.1 non-coding downstream 440214 22123090 ~ 22123205 (+)
XLOC_005937 BX649385.2 non-coding downstream 520648 22203524 ~ 22203638 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01180000_11103142_11105610 NA coding CI01180000 null 11103142 ~ 11105838 (+)