AMCG00002343


Basic Information

Item Value
gene id AMCG00002343
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 11791414 ~ 11792870 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00002343
TGTTATAGAATAAGAAGGGGCGATGGTGTTCCTCACTCTGTCACACTGGATCCGAAACCGGGGCCCGGACCGGTACTGGAGGGTCCAGGAGGTTCTGAAGAATGCCCGgctGTGGATCAGCCGTATCGCTGCTGCCTCCCGGGAGCACGGCCTCAAATACCCTGCCCTCATCCACAATCTCATCAAGGCAGCACTGGGGGACGCCAGCGAGCCACCTGGCATCTTCTCCCGCATCGTCCAGTCACACTGA

Function

GO: NA

KEGG:

id description
K02887 RP-L20, MRPL20, rplT; large subunit ribosomal protein L20

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00002343 True 250 mRNA 0.60 3 11791414 11792870

Neighbor

gene id symbol gene type direction distance location
AMCG00002330 NA coding upstream 24823 11751651 ~ 11766591 (+)
AMCG00002332 NA coding upstream 50367 11738324 ~ 11741047 (+)
AMCG00002329 NA coding upstream 53301 11731605 ~ 11738113 (+)
AMCG00002324 zbtb17 coding upstream 146630 11636813 ~ 11644784 (+)
AMCG00002325 NA coding upstream 163073 11623781 ~ 11628341 (+)
AMCG00002340 NA coding downstream 750 11793620 ~ 11797734 (+)
AMCG00002341 NA coding downstream 5414 11798284 ~ 11800507 (+)
AMCG00002342 atad3a,LOC103357928 coding downstream 12828 11805698 ~ 11813640 (+)
AMCG00002344 NA coding downstream 44990 11837860 ~ 11845019 (+)
AMCG00002354 NA coding downstream 112003 11904873 ~ 11905805 (+)
G122549 NA non-coding upstream 74713 11716355 ~ 11716701 (+)
G122501 NA non-coding upstream 105096 11685432 ~ 11686318 (+)
G122478 NA non-coding upstream 247793 11543104 ~ 11543621 (+)
G122471 NA non-coding upstream 257954 11530886 ~ 11533460 (+)
G122470 NA non-coding upstream 263316 11525232 ~ 11528098 (+)
G122592 NA non-coding downstream 63608 11856478 ~ 11857326 (+)
G122737 NA non-coding downstream 311800 12104670 ~ 12105523 (+)
G122743 NA non-coding downstream 335510 12128380 ~ 12129678 (+)
G122744 NA non-coding downstream 337008 12129878 ~ 12130747 (+)
G122829 NA non-coding downstream 579931 12372801 ~ 12373031 (+)
AMCG00002339 NA other upstream 76042 11710450 ~ 11715372 (+)
AMCG00002331 NA other upstream 97249 11688600 ~ 11694165 (+)
G122482 NA other upstream 160522 11629012 ~ 11630892 (+)
AMCG00002311 ttll10 other upstream 411846 11365614 ~ 11379568 (+)
AMCG00002310 NA other upstream 431574 11357552 ~ 11359840 (+)
G122582 NA other downstream 42569 11835439 ~ 11836169 (+)
AMCG00002355 NA other downstream 101603 11894473 ~ 11898701 (+)
AMCG00002360 NA other downstream 219101 12011971 ~ 12016084 (+)
G122746 NA other downstream 340916 12133786 ~ 12140465 (+)
AMCG00002390 NA other downstream 1238889 13031759 ~ 13051971 (+)

Expression


Co-expression Network