AMCG00002703


Basic Information

Item Value
gene id AMCG00002703
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 27218462 ~ 27229532 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00002703
GTCAGCAGAAGGACTTAAAGTGGAATCTTGCCGTTATTCAGCTGTTCTCAGCTGAGGGAATGGACACCTTCATAAAAATTTTGCAGAAACTGATCAGTATCCTCCTCCAGCCTTGGAGGCTGCATGGCAACATGGGTACAATCCTTCAACGTGTCATGATTGTCTCTGTGGCCTGCAGTACTCTCTGCCTGCTAAAGTGCATGCTGACAGAGCTGCTGAGGGGAGGCTCCTTTGAGTTTAAGGATACTCGTGTGCCCTCCACATTGGTCTCACTGCACATGATCCTTTGCTCCGTGCCCGTTTCTGGTCGCCTGGACTCGGAGGAGCAGAAAATACAGAGTGACATCATTGACATCCTGCTCACCTTTACACAGGGTGTCAATGAGCAGGCCACAGACACAGAAGAGACTCTGGCCAACAACACCTGGTCTCTCATGCTAAAAGAAGTTCTGTCCTCTGTGCTGAAGGCCCCGGAAGGTTTTTTTTCAGGACTCGCACTGCTGTCTGAACTGCTGCCCCTTCCTCTGCCCATGCAGAGTACACAGACCATTGCAACACAGGACATTGCTGTGGCACTTAACACTCGGAAGCTGTGGAGCATGCACCTTCATGTCCAAGCAAAATTGCTGCAGGAGATTGTGCGCTCTGTCAGTGGAACCACTTGTCAGCCCTTGCTGCACATGCTCAGACGagtgtgtgtgcagctgtgCGACCTGGCCTCCCCCACCGCCCTTCTCATTATGAGTACGGTACTCGAACTCATCCAGGAGGAAATTCAAGTCACCCCTGAAGGGAAAGACAAGGTCTGTACAGCACAGACCACTCGACTATGTGCACTCCTGGACTCCTTGGCTTCACACCGCGCCTGCAAAGTGGCTGCATTGCACCTCCTAAGTGGAGCCATTAAGGGAGATGAGAGGTTCTCTGAGTTATTCCCCTGCATTCTAGCACTGTTACAGCCTACTGCAGACAACAACATACACCAGCAACACTGTGCCGAGCTTATTGCATCTCTTATACAGTCGCTGTGTGACCAGgaCATCGCACTGATTGCCTCTTCAGATAGTTCACTCTCTGAAGCAGAACAGCTGGCCAATGCCCTCCCCTCCAAGGAGCTCCTCGCTGCCATGTGTGATGGAATGCTTGAAGTACTTGGCAATACGGACAGCAACTACACTCTTGTGCTTACTTGCATTAGGACCATGATGTTTTTAACAGAGCACGACTATGGCTTCTATCACTTAAAAAGTGCTCTGAAGAAACACAGTACTGCCCTGTGTGGATTAATCAAACGAGTAAACTTCTCATTTAACAAGGAATCTGCCGAGCTTGTGTCTGTCCTGCTGGACTTCCTCAGGCAGATCTTAAACACAGACTCCCTGGTGGTCTGCTGTGGGGATGAAGGTCCAAGCCCCATGGAGGTGGATGGCAGCAGCCCACCGCGCTCACTGGCTCTCAGTGCAGCTGAGATGAAGCAGCTCCTGCAGTGGAAGGACGACTCACAGAATCACCTGCTTCCTGAGCTGGAGAAACAGATTATGgtattt

Function

GO: NA

KEGG:

id description
K22910 VIRMA; protein virilizer

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00002703 True 1547 mRNA 0.51 7 27218462 27229532

Neighbor

gene id symbol gene type direction distance location
AMCG00002710 NA coding upstream 271720 26945924 ~ 26946742 (+)
AMCG00002701 LOC107565204 coding upstream 289994 26910718 ~ 26928468 (+)
AMCG00002702 fam91a1 coding upstream 329172 26877099 ~ 26889290 (+)
AMCG00002697 prelid3a,LOC107715058,LOC107723525 coding upstream 421686 26793575 ~ 26796776 (+)
AMCG00002698 NA coding upstream 441867 26766892 ~ 26776595 (+)
AMCG00002699 LOC105897825 coding downstream 53952 27283484 ~ 27285797 (+)
AMCG00002700 NA coding downstream 68833 27298365 ~ 27339159 (+)
G125336 NA non-coding upstream 394189 26821982 ~ 26824273 (+)
G125320 NA non-coding upstream 433852 26783782 ~ 26784610 (+)
G125296 NA non-coding upstream 556026 26661724 ~ 26662436 (+)
G125290 NA non-coding upstream 563005 26655239 ~ 26655457 (+)
G125288 NA non-coding upstream 563294 26653985 ~ 26655168 (+)
G125434 NA non-coding downstream 3892 27233424 ~ 27233719 (+)
G125436 NA non-coding downstream 5835 27235367 ~ 27275905 (+)
G125469 NA non-coding downstream 111450 27340982 ~ 27343083 (+)
G125219 NA other upstream 848937 26362212 ~ 26369525 (+)
AMCG00002684 rpl30,LOC107702100,LOC107568279 other upstream 939325 26275314 ~ 26279137 (+)
AMCG00002661 znf706,LOC103394271,LOC100712275,LOC103364770,LOC106534503,LOC107088369 other upstream 1834150 25374942 ~ 25384312 (+)
AMCG00002650 NA other upstream 2441647 24761884 ~ 24776815 (+)
G124863 NA other upstream 2795849 24422252 ~ 24422613 (+)

Expression


Co-expression Network