G122879


Basic Information

Item Value
gene id G122879
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 13068834 ~ 13069238 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU154067
GGCGTCTGTTTTACCCATTGACATTCGTCCTCTGCTTCTATTTGATGAGGCAGAAGGCGGGGCTAGTGACGGTTAGCTTCCGGGGAAAGGATCTCGCCAATCAGAGAGCTGCAAAAAGCAATTGGTCAGCCTGCTTCAGCACAGCCAATGGGAGTGCTCGAGAGGCGGGGCTTGTGACTGCGCGGTTTATTGTGAAGAAGAATGGAGGACGCGGTACGAGGGCAGGTTTCACAGTGTAGTGCTTAATCTGGACAGTGATCGGGGGCGAATTAAAGCCCTAATTCATGAAATCAACACACGCAACCGATGATTGAGCGGCGGAAGCAGAGCAGTTATTTTCTGGGTGTTGTATTCTTTACCCGGAGGCTGGCCCGGACAGGATGAGCTCGTCGCGGGAGATCAAGC

Function

GO:

id name namespace
GO:0005657 replication fork cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU154067 True 405 lncRNA 0.53 1 13068834 13069238

Neighbor

gene id symbol gene type direction distance location
AMCG00002392 NA coding downstream 24471 13032629 ~ 13044363 (-)
AMCG00002389 NA coding downstream 71412 12982829 ~ 12997422 (-)
AMCG00002385 tsnare1,si:ch211-208k15.1,LOC106605505,LOC107679652 coding downstream 564808 12483894 ~ 12504026 (-)
AMCG00002383 NA coding downstream 808428 12251292 ~ 12260406 (-)
AMCG00002384 NA coding downstream 819888 12248147 ~ 12248946 (-)
AMCG00002398 NA coding upstream 24826 13094064 ~ 13102528 (-)
AMCG00002395 NA coding upstream 49242 13118480 ~ 13121283 (-)
AMCG00002399 NA coding upstream 82351 13151589 ~ 13152326 (-)
AMCG00002396 NA coding upstream 83130 13152368 ~ 13179775 (-)
AMCG00002397 NA coding upstream 113483 13182721 ~ 13186037 (-)
G122877 NA non-coding downstream 1207 13067221 ~ 13067627 (-)
G122869 NA non-coding downstream 16444 13052026 ~ 13052390 (-)
G122858 NA non-coding downstream 63499 13000841 ~ 13005335 (-)
G122801 NA non-coding downstream 824920 12195920 ~ 12243914 (-)
G122726 NA non-coding downstream 1023815 12043315 ~ 12045019 (-)
G122897 NA non-coding upstream 72630 13141868 ~ 13147672 (-)
G122942 NA non-coding upstream 216099 13285337 ~ 13286312 (-)
G122945 NA non-coding upstream 219803 13289041 ~ 13289249 (-)
G122946 NA non-coding upstream 220070 13289308 ~ 13289916 (-)
G122947 NA non-coding upstream 221888 13291126 ~ 13291819 (-)
G122862 NA other downstream 39428 13028197 ~ 13029406 (-)
AMCG00002368 rbm24b,rbm24,rbm24a,LOC106596654,LOC107601977,LOC106517771,LOC105905339 other downstream 1062482 11995828 ~ 12006352 (-)
AMCG00002351 NA other downstream 1195972 11869607 ~ 11872862 (-)
AMCG00002350 tmem240a,tmem240,LOC107687438,LOC108275582,LOC105898995,LOC107593924,LOC107673083 other downstream 1213943 11848470 ~ 11854891 (-)
G122597 NA other downstream 1334510 11731617 ~ 11734324 (-)
AMCG00002421 sec61b,LOC102796100 other upstream 579989 13649227 ~ 13654247 (-)
G123263 NA other upstream 1872022 14941260 ~ 14946311 (-)
G123585 NA other upstream 3766918 16836156 ~ 16839722 (-)
AMCG00002503 NA other upstream 3888924 16958162 ~ 16974301 (-)
AMCG00002524 NA other upstream 4620770 17690008 ~ 17706289 (-)

Expression


Co-expression Network