AMCG00003446


Basic Information

Item Value
gene id AMCG00003446
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 3573781 ~ 3575615 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00003446
GCTGGGATGCCTGAGGACAGACTGTACATCCAGTGGAAGACAACCAGTCAGAATGTGTGGGAGTTCAGCAGTGGACAAGTGTTTCAGGGCCGAGGCTTCGAGGGCAGAGCTGAGGTCCCCACAGAGAAGATCAGACAGCTGGACTTCTTTCTGTCCATTCACAAAATCTCCTTCTCTGATGAAGATGTCTATGAGTGTTTTTATGAGGAAATGAATGGTGCAATGAGGTTCCTGGGATACAGTCATCTCATTGTTACAGCTCACCGAGACTCCCTCACCCTGCCGTCTGGAGCCTcactctccctgcctctccactCTTGTGCTCCAGTGGaggtgctgtttgctgctgcaggagagggAGCCTTTGTCTCAGTGTGCACTGTGGAGAGGGGCGCAGTGAGCCACCCTGGCCCCGGGTATGAGTTCAGAGTGTCAGTGCAGAACGTCTCTCTGACACTGCGCTCACTCACCGCAGCTGACCAGGGCCAGTACACAGTGAGGGAGTCTGAGACCCAAAGGACCATCagcactgtctctgtgtctgttgaAGCTGACCAGGGCCAGTACACAGTGAGGGAGTCTGAGACCCAAAGGACCATCAGCaccttctctgtgtctgtcttggTGAGAGACTCGAGCAACACAGCCATGGCTGCCATAGTGAGCTGTGGAGTGATCCTCCTGTTGTCTGCAGTGAGTGTAGGTCTGTATTTTGATCGCAAAGCATGGCtcaagagaaaagaaaagcaagaaatcCCAGTTCGATACGAGCCCAACTCTGACAATGAAGACCACCAGGTGCAGGAGGAAGCCCACTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00003446 True 819 mRNA 0.53 4 3573781 3575615

Neighbor

gene id symbol gene type direction distance location
AMCG00003441 NA coding upstream 68378 3499756 ~ 3505403 (+)
AMCG00003442 ccdc25 coding upstream 145491 3415214 ~ 3428290 (+)
AMCG00003438 LOC107602173 coding upstream 177303 3356883 ~ 3396478 (+)
AMCG00003434 NA coding upstream 370699 3189095 ~ 3203082 (+)
AMCG00003433 NA coding upstream 388952 3178253 ~ 3184829 (+)
AMCG00003445 mtmr9 coding downstream 14721 3590336 ~ 3608951 (+)
AMCG00003448 tdh,LOC106571022,LOC107723287,LOC103024478,LOC107561940,LOC106608345,LOC107589050 coding downstream 37969 3613584 ~ 3620349 (+)
AMCG00003450 pinx1,LOC107746133 coding downstream 67012 3642627 ~ 3657790 (+)
AMCG00003447 LOC107736623 coding downstream 122708 3698323 ~ 3704894 (+)
AMCG00003452 NA coding downstream 176088 3751703 ~ 3752823 (+)
G515 NA non-coding upstream 207438 3339846 ~ 3366343 (+)
G454 NA non-coding upstream 515580 3006968 ~ 3058201 (+)
G445 NA non-coding upstream 614350 2957218 ~ 2959431 (+)
G443 NA non-coding upstream 664339 2907642 ~ 2909442 (+)
G431 NA non-coding upstream 762229 2811314 ~ 2811552 (+)
G642 NA non-coding downstream 400138 3975753 ~ 3976039 (+)
G646 NA non-coding downstream 511281 4086896 ~ 4090319 (+)
G684 NA non-coding downstream 720944 4296559 ~ 4374939 (+)
G690 NA non-coding downstream 751038 4326653 ~ 4379819 (+)
G742 NA non-coding downstream 908275 4483890 ~ 4484270 (+)
AMCG00003473 NA other downstream 876949 4452564 ~ 4455142 (+)
AMCG00003469 NA other downstream 938416 4514031 ~ 4522400 (+)
AMCG00003480 NA other downstream 1727835 5303450 ~ 5334752 (+)
G1012 NA other downstream 2912077 6487692 ~ 6494905 (+)
AMCG00003524 rps7,LOC107668222 other downstream 3922425 7498040 ~ 7504015 (+)

Expression


Co-expression Network