AMCG00003634


Basic Information

Item Value
gene id AMCG00003634
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 12850133 ~ 12854702 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00003634
ATGCTTGTATATGCCGCTGTTGAAGAAGGTCAGTGTGGAGAAGTATTCCGTAGAAACACTCGCTCGGCACAACCCAAGCACGAAGAGCGCAGGCACAACAACACCCCGGCCAGCAGGTGCCATGTTATGTTTGTGCAGaaatcctGCCAGAAGCCCGTGgacaaatatattgaatatgaTCCAGTTATAATTTTGATTGATGCCATATTATGTAAAGCCCAAGCATACAGACATATTCTATTTAACACAAAAGTCAATATTCATGggaagctgtgtgtgttttgtctgctCTGTGAAGCATACCTGAGGTGGTCGCAGCTGCAGGGTTCACAGCAAAGCAGTGATCCAGCCGACATCATAAGATACACTAAAGAATGGGATTTCTATGCCATGTTTGGGCTGGCGGCACTGGAGCTGGTGGTGTTCCTGGCCGCAGTGCTGCTGTTCTTGTGGGCAGCGCAGGGCCTCCTGACCTCCAGGCTGCAGCCCTCCATGCTGCTCAAAGCCCTGTTACTGTCCAGCTATGGGAAGCTGCTCCTTATCCCAGCTGTGATCTGGGAGCATGACTACTCCCCTCTCTGCTTCAGTCTCATCAAGCTCTTCGTGCTCACGTCAAACTCCCAGGCCATCAGAGtgattttGAACAGCAGCAGGAGGCTCTCGGTCTTGGCAGTGCTGGTGGGTTTTGCTTTGGAAACCACTGCAGCGCACAGCTTCCAGAACATGCACTGGTTC

Function

GO: NA

KEGG:

id description
K21848 ARV1; lipid intermediate transporter

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00003634 True 735 mRNA 0.51 5 12850133 12854702

Neighbor

gene id symbol gene type direction distance location
AMCG00003630 NA coding upstream 701234 12147640 ~ 12148899 (+)
AMCG00003628 NA coding upstream 705205 12132846 ~ 12144928 (+)
AMCG00003624 NA coding upstream 825199 12006436 ~ 12024934 (+)
AMCG00003622 NA coding upstream 993400 11851827 ~ 11856733 (+)
AMCG00003620 NA coding upstream 1009637 11839737 ~ 11840496 (+)
AMCG00003639 exoc8 coding downstream 11715 12866417 ~ 12868471 (+)
AMCG00003633 trim67,LOC106571401 coding downstream 17811 12872513 ~ 12880357 (+)
AMCG00003642 NA coding downstream 36466 12891168 ~ 12901958 (+)
AMCG00003641 NA coding downstream 64135 12918837 ~ 12926056 (+)
AMCG00003649 ccdc28a coding downstream 165675 13020377 ~ 13024239 (+)
G2139 NA non-coding upstream 462075 12387603 ~ 12388058 (+)
G2125 NA non-coding upstream 590490 12220322 ~ 12259643 (+)
G2086 NA non-coding upstream 761147 12087537 ~ 12088986 (+)
G2042 NA non-coding upstream 821940 12026126 ~ 12028193 (+)
G2027 NA non-coding upstream 943945 11905983 ~ 11906188 (+)
G2250 NA non-coding downstream 219986 13074688 ~ 13080021 (+)
G2264 NA non-coding downstream 243859 13098561 ~ 13101316 (+)
G2267 NA non-coding downstream 247755 13102457 ~ 13102666 (+)
G2281 NA non-coding downstream 372533 13227235 ~ 13228357 (+)
G2294 NA non-coding downstream 392607 13247309 ~ 13254443 (+)
AMCG00003614 NA other upstream 1120142 11725083 ~ 11729991 (+)
G1989 cnr1,LOC104936193 other upstream 1272804 11573731 ~ 11577329 (+)
AMCG00003606 NA other upstream 1358536 11490185 ~ 11491597 (+)
AMCG00003604 NA other upstream 1367202 11461663 ~ 11482931 (+)
AMCG00003570 NA other upstream 3068377 9777508 ~ 9781756 (+)
AMCG00003643 kif25,LOC100703631,LOC102203072 other downstream 47864 12902566 ~ 12917002 (+)
AMCG00003648 LOC106571761 other downstream 170867 13025569 ~ 13042597 (+)
AMCG00003655 xdh other downstream 300358 13155060 ~ 13206839 (+)
G2440 NA other downstream 1563814 14418516 ~ 14419732 (+)
AMCG00003690 NA other downstream 1997050 14851752 ~ 14866758 (+)

Expression


Co-expression Network