Gene
RNA
| Item | Value |
|---|---|
| gene id | G2267 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030121.1 |
| NCBI id | CM030121.1 |
| chromosome length | 57050121 |
| location | 13102457 ~ 13102666 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0004519 | endonuclease activity | molecular_function |
| GO:0004521 | endoribonuclease activity | molecular_function |
| GO:0004540 | ribonuclease activity | molecular_function |
| GO:0016891 | endoribonuclease activity, producing 5'-phosphomonoesters | molecular_function |
| GO:0016893 | endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters | molecular_function |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2745 | True | 210 | lncRNA | 0.48 | 1 | 13102457 | 13102666 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00003653 | NA | coding | upstream | 10363 | 13091093 ~ 13092094 (+) |
| AMCG00003647 | NA | coding | upstream | 47276 | 13053429 ~ 13055181 (+) |
| AMCG00003649 | ccdc28a | coding | upstream | 78218 | 13020377 ~ 13024239 (+) |
| AMCG00003641 | NA | coding | upstream | 176401 | 12918837 ~ 12926056 (+) |
| AMCG00003642 | NA | coding | upstream | 200499 | 12891168 ~ 12901958 (+) |
| AMCG00003654 | cnih4,LOC106584110 | coding | downstream | 139385 | 13242051 ~ 13246855 (+) |
| AMCG00003656 | NA | coding | downstream | 217537 | 13320203 ~ 13325222 (+) |
| AMCG00003666 | NA | coding | downstream | 634936 | 13737602 ~ 13744368 (+) |
| AMCG00003668 | NA | coding | downstream | 694613 | 13797279 ~ 13797599 (+) |
| AMCG00003670 | esrrga,LOC107582200,LOC107733169 | coding | downstream | 906805 | 14009471 ~ 14013046 (+) |
| G2264 | NA | non-coding | upstream | 1141 | 13098561 ~ 13101316 (+) |
| G2250 | NA | non-coding | upstream | 22436 | 13074688 ~ 13080021 (+) |
| G2139 | NA | non-coding | upstream | 714399 | 12387603 ~ 12388058 (+) |
| G2125 | NA | non-coding | upstream | 842814 | 12220322 ~ 12259643 (+) |
| G2086 | NA | non-coding | upstream | 1013471 | 12087537 ~ 12088986 (+) |
| G2281 | NA | non-coding | downstream | 124569 | 13227235 ~ 13228357 (+) |
| G2294 | NA | non-coding | downstream | 144643 | 13247309 ~ 13254443 (+) |
| G2323 | NA | non-coding | downstream | 312265 | 13414931 ~ 13415156 (+) |
| G2326 | NA | non-coding | downstream | 382926 | 13485592 ~ 13485807 (+) |
| G2329 | NA | non-coding | downstream | 405221 | 13507887 ~ 13509930 (+) |
| AMCG00003648 | LOC106571761 | other | upstream | 59860 | 13025569 ~ 13042597 (+) |
| AMCG00003643 | kif25,LOC100703631,LOC102203072 | other | upstream | 185455 | 12902566 ~ 12917002 (+) |
| AMCG00003614 | NA | other | upstream | 1372466 | 11725083 ~ 11729991 (+) |
| G1989 | cnr1,LOC104936193 | other | upstream | 1525128 | 11573731 ~ 11577329 (+) |
| AMCG00003606 | NA | other | upstream | 1610860 | 11490185 ~ 11491597 (+) |
| AMCG00003655 | xdh | other | downstream | 52394 | 13155060 ~ 13206839 (+) |
| G2440 | NA | other | downstream | 1315850 | 14418516 ~ 14419732 (+) |
| AMCG00003690 | NA | other | downstream | 1749086 | 14851752 ~ 14866758 (+) |
| AMCG00003702 | NA | other | downstream | 2198414 | 15301080 ~ 15318228 (+) |
| AMCG00003712 | extl3,LOC106571659,LOC106608199 | other | downstream | 2922205 | 16024871 ~ 16039640 (+) |
