AMCG00003643 (kif25,LOC100703631,LOC102203072)


Basic Information

Item Value
gene id AMCG00003643
gene name kif25,LOC100703631,LOC102203072
gene type misc
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 12902566 ~ 12917002 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00003643
CGTACGTCAATCACGCCATGGCTTTGACAAGCAGTGATCCAGTCAAAACAGACTGACGTGCAACAAGTGTGCGCAGGCTGTCGCGACGCCGCAGAAGCAGCTCTTTATGTTTCTTGTTGTTGAATGTAAAAATGCCCGTCTTCATCCACCCGGAGCAGACTGTTGCCCGCCATGCTTTCCTGCTGCAGCAGAAACTCCGGAGTAAAGAAGAAAGGATTATTGAGCTTGAGACGGAAAATGCTCTTCTTCACCTGAAACTGGCTGAGTGGTATGGGCATATTTGCAGAAAGACAGAAGAGAGAGTTCCTACTGGTCAACAGGAACAACAACGTCTTCACCCCGTCCTGGTGAATCTTCTAACAGAAGTTCACGTTTTAAGACAAAACCTTGCAGATCTGTATTCTGCATATGTTGGATTCTCCAGTGAACTTGAACAGCAGAGCAGAGGCTTCCTTGAGCAAGTGAACTCTGTCTGCTGCAGCATCCAGGACCGCAGCGTTGATGTGCGCAACCTCCAGGCTCAAGTTGTGGATCTGGAAAAGTCCTTACATGAAGAGAAGGAAAGGTACAAGAATGAGAAGCAGAGAAGGAAAGTTCTTCATAATACCCTGATTGAGCTCCGAGGGAACATCAGAGTGCACTGTCGCGTGCGCCCACTGCTGCATTTAGACGCTGGACTCTGCGATACAGATGTGTTGCCaagGTCTACATTGTCAGAGAAAGTGGTCCATGCTGTTAATGAGGACACTGTTGTCGTTGAATGCTCCAGATCTGGCAACCCTCCGATGAATAAAGTGTTTGAATTTGAGAGGGTGCACGGACCCAATGACTCTCAGAAGACGGTGTTTGAAGACGTCCGCCCCCTGCTCACCTCTCTCCTGGATGGGTACAATGTGTGCGTAATGGCGTATGGACAGACGGGCAGTGGGAAGTCGTACACGATGATCGGATCCCAAACAGAAGATACCCTCTTGCCAGAGAAGGTGCCACATGAAGGCATTATCCCCAGAGCAACCAGGGAGCTCTTCAGCCTTGTGTCCAAGACACCTCGGGGTAGCCATGACATTGAGCTGTCGGTGCTGGAGGTGTACAACAACGAGGTGTGGGATCTCTTGGCTAGGGATTGTGAGGGGGCAGCTGGAGGGGTGAAGCGTGACGTTGTCTCTACCAACACTGGGACCAGCGAGGTGCCATCCCTGATGCATGAGCGTGTGCAGAGCGCCGAGGAGGCTCTCCGTCTGATTGGCCACGTCTTGCACCTACGAGCAAGAAACTCCACACTGGTCCATGCCGACTCCTCCCGTTCTCACCTGGTCATCACCCTGACGGTCACATCAAAGGGCCCTGATGCTTTGGACCTGGGAATGTCTGGAGTAACTGGGATAGCTCTACGGGAAACATCCTTTATCAACCGCAGTCTGTCAGCTTTGTCGGACGTGCTGGGAGCTCTGTCTGAGCAAAGGCCTCATATCCCCTACCGAAACAGCAAGCTCACCCACTTCCTGCAGGACTGCATCGGGGGGGAGGCTAAACTGCTTGTGATGCTTTGCGTTTCTCCGACCCAGCGGTTCCTGTCCGAATCCCTGCAGTCTCTGGGCTTTGGAACCCGTGCTCGGCAGGTTCAGAAAGAACCATGTCGAAAAAAAAGTGGGGCcaccaaattaaaataaccatctttgtgtttttcagtgttcGCATAGTGTAACCAATTCAAGCTGTGTAGCGCTCTGTGCTGTCCTTATATCTGAACTTATGTCTGTGCTGTAACTTTCAATGGCTTgcttgttttataatatttgctTATTTAGATGCTGATAAATGTCAAGTCTATTCTCAAAATCCATTGCACTGCATCGTATAGTATAAAAACTGCCTGCAGGAGACAGGAGACCATCAGGTAGATACAGGGAATTctgtttctatttataaattGTAGATGTAGGTAGATTGTGTAAAACCATCTACATCATATGTAgtacattcaaaatgtatgtttatgttgtgggataaaccaaa
>TU2631
TGCGCAGGCTGTCGCGACGCCGCAGAAGCAGCTCTTTATGTTTCTTGTTGTTGAATGTAAAAATGCCCGTCTTCATCCACCCGGAGCAGACTGTTGCCCGCCATGCTTTCCTGCTGCAGCAGAAACTCCGGAGTAAAGAAGAAAGGATTATTGAGCTTGAGACGGAAAATGCTCTTCTTCACCTGAAACTGGCTGAGGTGCGATTTCTCTATGAGGGGCAGTtcctttaaaacattacaaatggtATTATGTACCAAAGTGGCTATATCATATAGTACAAACATAtcaatcatataccaaagtggatacgTCATACAgcagaaaatatttacataagaaagtttatataacattgcaaaaaaacattgtataatgaTCATAGACCACAAAAATGTCCTCCAGCTTAAATAAAATGGGTACAAAAGCATTGAACCAATATACCACTGACCCGACTGATTTACAGTGGGGACCCATCCTGCACAAACATGCCAAAATAAGAGCAAAACACAAGatatacaataaacacaaaatgtgaaactgaGGGATAAGTGGGTGGTTCTGATTCGGTTGTACTTAAAACATggagtttttcccttttcaattgAAAATGGTGAATGCTGTTGGCTGTTTTGttgaaacatgaaaatgtagcctgcttctgtaattgtatatttattaccTTTTTACTCATAGAGATGGTGGCTTGTCAACATCCTCTGTGAGGAGCAACCTGTCGTAATAAAACATTTAGC

Function

symbol description
kif25 Predicted to enable ATP hydrolysis activity; microtubule binding activity; and microtubule motor activity. Predicted to be involved in microtubule-based movement. Predicted to be part of kinesin complex. Predicted to be active in microtubule. Orthologous to human KIF25 (kinesin family member 25).

NR:

description
PREDICTED: kinesin-like protein KIF25 isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00003643 True 2016 mRNA 0.49 14 12902566 12917002
TU2631 False 752 lncRNA 0.39 2 12902635 12903622

Neighbor

gene id symbol gene type direction distance location
AMCG00003642 NA coding upstream 608 12891168 ~ 12901958 (+)
AMCG00003633 trim67,LOC106571401 coding upstream 22209 12872513 ~ 12880357 (+)
AMCG00003639 exoc8 coding upstream 34095 12866417 ~ 12868471 (+)
AMCG00003634 NA coding upstream 47864 12850133 ~ 12854702 (+)
AMCG00003630 NA coding upstream 753667 12147640 ~ 12148899 (+)
AMCG00003641 NA coding downstream 1835 12918837 ~ 12926056 (+)
AMCG00003649 ccdc28a coding downstream 103375 13020377 ~ 13024239 (+)
AMCG00003647 NA coding downstream 136427 13053429 ~ 13055181 (+)
AMCG00003653 NA coding downstream 174091 13091093 ~ 13092094 (+)
AMCG00003654 cnih4,LOC106584110 coding downstream 325049 13242051 ~ 13246855 (+)
G2139 NA non-coding upstream 514508 12387603 ~ 12388058 (+)
G2125 NA non-coding upstream 642923 12220322 ~ 12259643 (+)
G2086 NA non-coding upstream 813580 12087537 ~ 12088986 (+)
G2042 NA non-coding upstream 874373 12026126 ~ 12028193 (+)
G2027 NA non-coding upstream 996378 11905983 ~ 11906188 (+)
G2250 NA non-coding downstream 157686 13074688 ~ 13080021 (+)
G2264 NA non-coding downstream 181559 13098561 ~ 13101316 (+)
G2267 NA non-coding downstream 185455 13102457 ~ 13102666 (+)
G2281 NA non-coding downstream 310233 13227235 ~ 13228357 (+)
G2294 NA non-coding downstream 330307 13247309 ~ 13254443 (+)
AMCG00003614 NA other upstream 1172575 11725083 ~ 11729991 (+)
G1989 cnr1,LOC104936193 other upstream 1325237 11573731 ~ 11577329 (+)
AMCG00003606 NA other upstream 1410969 11490185 ~ 11491597 (+)
AMCG00003604 NA other upstream 1419635 11461663 ~ 11482931 (+)
AMCG00003570 NA other upstream 3120810 9777508 ~ 9781756 (+)
AMCG00003648 LOC106571761 other downstream 108567 13025569 ~ 13042597 (+)
AMCG00003655 xdh other downstream 238058 13155060 ~ 13206839 (+)
G2440 NA other downstream 1501514 14418516 ~ 14419732 (+)
AMCG00003690 NA other downstream 1934750 14851752 ~ 14866758 (+)
AMCG00003702 NA other downstream 2384078 15301080 ~ 15318228 (+)

Expression


Co-expression Network