AMCG00003733 (kif28p)


Basic Information

Item Value
gene id AMCG00003733
gene name kif28p
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 16576388 ~ 16589499 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00003733
ATGGACCTGCTGTGTAAAAGCAAGATGGCGGCCGGGGGGCTGAAGGTGAGGGAGGAGCAGCAAAGGGGTTTCTATGTGGAGGGGCTGCGGACGGTGCCATGCGAGAGCTATGCCCAGATCGAGCAGCTGATGGAGCAGGGCACTCGCAGCCGCACCACCGCCAGCACCAACACCAACTCCTGCAGCAGCCGTTCGCACATGCTCCTCACCGTCCAGCTCAAACAGATCTTCTCCAAGGAGAACATCACCAAGCAGTCCAACATTAACCTGGTGGACCTGGCGGGCAGTGAGAGGCAGAGGACCGCGGGGTCGGAGGGGGACCGGCTGAAGGAAGGCATGGCTATCAACCTGAGTCTGACCACGCTGGGCAATGTCATCAGCTCTTTGGCAGATGTTGCTCTGGGCAAGAAAGCCATTCACATCCCATACAGAGACTCCATCCTCACCAAGCTGCTGCAGTCGGCCCTGGGAGGCAACAGCCGGACTGTCATGATCGCAGCCCTGAGCCCTGCTGATATCTGCTATGAGGAAACACTCTCGACGTTACGCTTTGCAGAGAGAGCGAAGAGGATCCAGAACAAGGCCGTGGTCAACGAGAGCCCCACGGAGCGGCTGATCAAGGAGCTGAAGTCCGAAAGCGCCAAACTTCTGCTCCGACTGTCCAAACTGGGGCAGGACGGACGGAGAACCGAGGACGAGACAAAGGAGCTGCGGCTGCTGCTGACCCAGAATGAGCTGCAGATCCAGGCGATCCAGACGCTGTGGCAGCAGCACCTGCAGGAGGCGTTGCAAGACTGGGAGCTGCAGTACGCCACCATCACGCAGGCACACAACCCGccggcgcacacacacacactggcccTGTGGCTGCAGAGAAAACGCCTTCACAGATTAATCACTGTAGTGTCCTATACCGAGAGGCGAATGATGCAGACGTACCCTTACATCCTGAACATCAACGAAGACCCCCAGCTCTCAGGAGTGGTGAAACTCTTTATCCAGGACGGCGAATGGGAAATCGGTCTATTGGACGGCACTCCCAATGTGATCACCATCAAAGGTCTGGGCATCCAAGAGAAACACGCCACCTTTACAAACACTGCTCGCAGAGTGAACATCACTCCCCGGTCTGAGGCCAAAGTGATTGTGAACGGAGCCCCCATCTCTAACAGAACGGAGCTGAGACATTTAGACCGTCTAATCCTGGGATCCAACAGCACTTACCTGTACATCGGCTTCCCCTCCGACCGCAGCGATGAGGACTGGAGCCGCTACGACTACGACTACTTCCAGTCAGAGCTGGCGGAGGCCGAAGGGTTTCATTTAGGGAAGCTGGGTGAGACTGGTGCTGCGGACGGCCCAGTGAACCCCAGCTTGCTGGCTGTCTTCCACGACTACATCAAGGTCATGCCCATGGTAGCAGAGGCAAACCAAATCAGCCAGGAGCTCAACAGGGGAGTGGAATTCAAGTTAGAGATCAAGAACCTGGCCATGTCCGACTCCAAAGGCCACGATCTGGAAAAGGAAATCGTCATCAAAGTGACACTCAGAGAAACAAAGCAGGTGTGGGTGTGGTCCAAAGCCAAGTTCGTGAATCGCAAGTTCCTGATGGAGGAGCTGTACCAGCAGCAGGCGGAGGGGGGTGCTGTCAATGTGGGGCCCGACAGAGACCCCTTCTGGGACCCGCTGGAGCCGGTGCACCTGGGCTGTGCACACATCTGGCTGCAGTCCCTGGCCTTCCGCATCCGCCTGGAGGAGCAGCTGGAGGTGCTGGGCTCCCAGGGCGGGGAGGAGGCCCTGCTGCAGGTCGAGCTGGTCCCCTGCTCCCGCGATGGCCAGGCCCTGGGGGAGGATGACATCATGATAGACCCCACAGAGCTGCTGGGCCGAAGGTTTGACTTCCAGATCCACGTGGCGCGCTGTTTCGGGGTGCGCTGGCTGAAGGAGGCCAGAGAGAGGGGCGTCCAGGTCGGGTTCAGCGTGTTCACTAACCCACAGCCCTTTTACACCGCACCTGTTTGGCACAACGTGAATCCCGTCTTGGAGCACAAAGTGCAAGTCACTGTTCCCAGCGTGTCGCAAGACTTCCTCAACTATCTGCAGACCAACGCCCTGGTCCTGGAGCTGTGGGGGCTGCAAGAGGGCTGCACTGAAAAGACCTCTCTAGAAAACGTGCTGGTCACTGAGGAAGGCAGCTTCATCATTGATGATGCCAGGACATCACCGTCCAGCAATGCTAACGCTGAACTGTGCAATGGCAGGGGCAGCGCCTACAGTCTTGGCCTGCCCAGTAAAGCGGAGCGGAGGGGCAGCCTGAGGACCAGCTGTGACGCAGAGTTTGCCCGAGCTCTCAAAGTCTTCTATCAGAGCATGAATGCAGTCAGGGGTCAGCTCCAGAGGCTAACACAGCACAGGCCTGGAGGCTTTCTTGAGGAGCAGGGGAGGATGCTGAGAGCGTTCGGCGAGCAGCTGGAGGGCTGTGTGACCAAGCTGAAGCAGGACGTGGCCGCCATCGTGAGGAGGAAGCGGGAGAGGTCTGGGGTCTGGTGA

Function

symbol description
kif28p Predicted to enable microtubule binding activity and microtubule motor activity. Predicted to be involved in mitochondrion organization and organelle transport along microtubule. Predicted to be located in mitochondrial membrane. Predicted to be part of kinesin complex. Predicted to be active in microtubule.

NR:

description
PREDICTED: kinesin-like protein KIF28P

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00003733 True 2550 mRNA 0.58 18 16576388 16589499

Neighbor

gene id symbol gene type direction distance location
AMCG00003729 NA coding upstream 6685 16547072 ~ 16569703 (+)
AMCG00003730 snap25,snap25a,LOC107698362,LOC107719097,LOC102796069,LOC103398514,LOC107599071 coding upstream 53802 16518106 ~ 16522586 (+)
AMCG00003727 NA coding upstream 148680 16415450 ~ 16427708 (+)
AMCG00003719 NA coding upstream 287686 16287662 ~ 16288702 (+)
AMCG00003720 mcm3 coding upstream 310690 16258454 ~ 16265698 (+)
AMCG00003737 NA coding downstream 62335 16651834 ~ 16660947 (+)
AMCG00003738 NA coding downstream 104071 16693570 ~ 16699348 (+)
AMCG00003739 NA coding downstream 258295 16847794 ~ 16850839 (+)
AMCG00003743 NA coding downstream 283144 16872643 ~ 16877245 (+)
AMCG00003745 hnrnpu,LOC107689318,LOC107729300,LOC107693167 coding downstream 426165 17015664 ~ 17029628 (+)
G2797 NA non-coding upstream 145833 16429034 ~ 16430555 (+)
G2755 NA non-coding upstream 344890 16229935 ~ 16231498 (+)
G2721 NA non-coding upstream 490396 16085140 ~ 16085992 (+)
G2719 NA non-coding upstream 491522 16081182 ~ 16084866 (+)
G2698 NA non-coding upstream 543453 16032708 ~ 16032935 (+)
G2833 NA non-coding downstream 3765 16593264 ~ 16597369 (+)
G2836 NA non-coding downstream 9559 16599058 ~ 16599329 (+)
G2861 NA non-coding downstream 278800 16868299 ~ 16934020 (+)
G2945 LOC104942205,LOC105908308,LOC105908357,LOC107592771,LOC107752785 non-coding downstream 618536 17208035 ~ 17210041 (+)
G2967 NA non-coding downstream 664767 17254266 ~ 17256450 (+)
AMCG00003712 extl3,LOC106571659,LOC106608199 other upstream 536748 16024871 ~ 16039640 (+)
AMCG00003702 NA other upstream 1258160 15301080 ~ 15318228 (+)
AMCG00003690 NA other upstream 1709630 14851752 ~ 14866758 (+)
G2440 NA other upstream 2156656 14418516 ~ 14419732 (+)
AMCG00003655 xdh other upstream 3369549 13155060 ~ 13206839 (+)
AMCG00003744 NA other downstream 443071 17032570 ~ 17042594 (+)
G3047 NA other downstream 1092318 17681817 ~ 17683988 (+)
AMCG00003779 ctsb,catb,LOC107381178 other downstream 1542420 18131919 ~ 18142633 (+)
G3108 NA other downstream 1557161 18146660 ~ 18152314 (+)
AMCG00003828 ctgf,ctgfa,moxd1,LOC106571301,LOC107683930,LOC106571350 other downstream 2682466 19271965 ~ 19397686 (+)

Expression


Co-expression Network