AMCG00003854


Basic Information

Item Value
gene id AMCG00003854
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 21857490 ~ 21862799 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00003854
actgaaaatgtgcaaaagaaaaggaagaagaaaaatccCAAAATAAAAGCCAGAAAACAGAAAGTGAAGGCATCGGATTATTCTAACAGTCTTTTGGCTGAACTTCCTTttgcaaacacagaaataagaaagGAGTTTGGCATCAGTACCTCAGAAAAGAGTTTGAAAAAAAAGCGAAAGAGGAAAATTGCTGCAGGGATTGAAGAGGATGCAGatgagaaaaagaagaagaagaaagatcaTCGCCCAAACTATTTTGTGTCCATACCCATTACAAACCCTGAGATTAAAGGAGGTATTGAAGCTGTCCAAGACATTATTGTCCAGAAGGATCACAGGTTTTCTAAAGCAATGATTCCTGTTGGCAGCCTTCACATCACTCTGCTTGTGACCCACTTAGGCAATGAAGAAGAAGTCAACATGGCAGGTTGTGCGGTGACTGAGCTAAAGGAACTACTGCCTGACTTGCTGCAGGGGAAGGAGCTGGTACTGCCTTTCAGTGGAATCGCACATTTCAGAAACGAGGTTGCGTTTGTGCAGCTGGCAGAGGGGGAGCATGtgaaaacactacaaaatgttGCAGAGGCAGTGAGAAAGGCATTTGAAGAAAAGGGCATCCTAACTGGGGACAGCAAAGCTTTCAAGCCACACCTGACCTTCATGAAGCTGTCAAGGGCTCCAAAGCTGCGCAAT

Function

GO: NA

KEGG:

id description
K16524 AKAP7; A-kinase anchor protein 7

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00003854 True 693 mRNA 0.44 5 21857490 21862799

Neighbor

gene id symbol gene type direction distance location
AMCG00003847 NA coding upstream 321732 21491884 ~ 21535758 (+)
AMCG00003846 NA coding upstream 410369 21440114 ~ 21447121 (+)
AMCG00003845 NA coding upstream 418811 21348227 ~ 21438679 (+)
AMCG00003843 lama2 coding upstream 524266 21314074 ~ 21333224 (+)
AMCG00003844 lama2,LOC107653134 coding upstream 561272 21288460 ~ 21296218 (+)
AMCG00003855 NA coding downstream 87532 21950331 ~ 21958985 (+)
AMCG00003856 NA coding downstream 107697 21970496 ~ 21981590 (+)
AMCG00003861 NA coding downstream 238489 22101288 ~ 22106730 (+)
AMCG00003873 NA coding downstream 612288 22475087 ~ 22498055 (+)
AMCG00003871 NA coding downstream 650936 22513735 ~ 22523525 (+)
G3770 NA non-coding upstream 97691 21750527 ~ 21759799 (+)
G3767 NA non-coding upstream 124791 21732491 ~ 21732699 (+)
G3757 NA non-coding upstream 256630 21600632 ~ 21600860 (+)
G3754 NA non-coding upstream 259060 21595856 ~ 21598430 (+)
G3690 NA non-coding upstream 767236 21089595 ~ 21090254 (+)
G3798 NA non-coding downstream 54477 21917276 ~ 22016452 (+)
G3845 NA non-coding downstream 214193 22076992 ~ 22077458 (+)
G3863 NA non-coding downstream 307541 22170340 ~ 22172105 (+)
G3871 NA non-coding downstream 320444 22183243 ~ 22184811 (+)
G3878 NA non-coding downstream 334515 22197314 ~ 22200678 (+)
G3771 NA other upstream 96860 21745850 ~ 21760630 (+)
G3751 NA other upstream 307957 21549201 ~ 21549533 (+)
AMCG00003828 ctgf,ctgfa,moxd1,LOC106571301,LOC107683930,LOC106571350 other upstream 2459804 19271965 ~ 19397686 (+)
G3108 NA other upstream 3705176 18146660 ~ 18152314 (+)
AMCG00003779 ctsb,catb,LOC107381178 other upstream 3714857 18131919 ~ 18142633 (+)
AMCG00003853 NA other downstream 27724 21890523 ~ 21901865 (+)
G3799 med23 other downstream 59837 21922636 ~ 21923787 (+)
AMCG00003874 NA other downstream 820217 22683016 ~ 22769227 (+)
AMCG00003884 NA other downstream 1469802 23332601 ~ 23338241 (+)
AMCG00003891 NA other downstream 1659027 23521826 ~ 23533875 (+)

Expression


Co-expression Network