AMCG00003855


Basic Information

Item Value
gene id AMCG00003855
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 21950331 ~ 21958985 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00003855
CTTTAAACCAGCTTTAAACCCTGAAACTGTATAGTTACATATACAcagttggagagagagagtgagactaGCAATTTGACTGGATGAGGATTGAGGAAATGAGGAACTTGTTGGCAATATGATCAAGTACATAATACTTCagttaacattttacaaagacATTCATAACCAGTATGAATATACACTGTGTCATTCTGCTCATTTTTATTAGAGAAGCTGGTACTTTGCCAGCTACAGGCTCATTCAGCCCTGACTGTGTACAATTGTCATCTAAAAATCTAATAACAATTCTCCAATGGAAGCCAGGAAAGGGAAGCAGTAGCACAACTTTGtataatgtacaatacaaactatatgGAGAAAAGAAATGGATCAATGGCTGTCAGAATATCAGATATCTTTCTTGTGATCTAACGAAGGAAATCAATTTGAAAGATGAGTATACCGGACGTGTGCGGGCAATACACAACAAAGTTTACTCGGAGTGGgTTATAGAGGAAAGTCACATGATAAACAAGCAATCCAAAATGGGCCAAAAAGATAACAAAGTTAAAGCTGATGAAATTCCAGGAATAATCAActctaaacagaaaaaaaatcagtatgTTGCCTTGCCAGCAAATCAGATCCTACCGCTGAAGACATTCAGCGCTGACACTGATGAAGTAATGACCTTGATTTCAGATGCTTTCCCAACTCAGCTGTTTTCTCAGGCACTGCAGAACTCTGAATACATTGTAGGCTTTAGCTGTACAGGAGCACCGACAGACCCAGATCTGGGATTGGTTCAGATTTATGGAACAGTTCGCGAGTATGGAAATACACTCACCACAGTAGGGCTTCATGTTTATAGAAATACTCAAGATGAACAGAACAACCAGTATGCAAATGTGCAAAACACAATTCAGACTGATCCTGTGAATGCAATCATCAATGACCAGCAAAGAAATGGGAAGACCCTCCAGCATATATACAGCAATTTATCACCTTCATCCAACAACAATGAGTATAATAACTTGGGCCAAGCCTTGCAAATCGTCAACAAAGCATACACATAGTGTCAGTTTTAAAGGAATGTTATTTTCAACTTGCTCAtacttttacaaatataataacatttttgaaattatgtgaattattgtacattattatataGCTAGAATCTTTCAAACCTAACAATCTAGCAATCTTAAGATATATAGAAATTAGATATTTGAATGCCTTTTGTACTGTAAACTGAATGCACACCTCTTGGAATCTTGATTACTCGCATAATTTTCTGGtcccttttatttttgccttatttttacatttcacattttctcctGCAATCTACATTGATAAATCAATAGCCTGGTGTGTATACCCTTGCTTGATGTTTTAtctgacaaaaatataatttgtgcaACGTTTGAGTACAGAAAGAAAGTTTTGCAGACAAAACAACTAAACTTGTAAATtccaatattttgttttttgtttgcttgatgCATTGttcagtaaatgtattttgagaaaATGCCAGCATTTGtgtgaaaagttaaaaaataaacatgaattaattCAAAGAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00003855 True 1571 mRNA 0.35 4 21950331 21958985

Neighbor

gene id symbol gene type direction distance location
AMCG00003854 NA coding upstream 87532 21857490 ~ 21862799 (+)
AMCG00003847 NA coding upstream 414573 21491884 ~ 21535758 (+)
AMCG00003846 NA coding upstream 503210 21440114 ~ 21447121 (+)
AMCG00003845 NA coding upstream 511652 21348227 ~ 21438679 (+)
AMCG00003843 lama2 coding upstream 617107 21314074 ~ 21333224 (+)
AMCG00003856 NA coding downstream 11511 21970496 ~ 21981590 (+)
AMCG00003861 NA coding downstream 142303 22101288 ~ 22106730 (+)
AMCG00003873 NA coding downstream 516102 22475087 ~ 22498055 (+)
AMCG00003871 NA coding downstream 554750 22513735 ~ 22523525 (+)
AMCG00003872 NA coding downstream 569374 22528359 ~ 22536293 (+)
G3770 NA non-coding upstream 190532 21750527 ~ 21759799 (+)
G3767 NA non-coding upstream 217632 21732491 ~ 21732699 (+)
G3757 NA non-coding upstream 349471 21600632 ~ 21600860 (+)
G3754 NA non-coding upstream 351901 21595856 ~ 21598430 (+)
G3690 NA non-coding upstream 860077 21089595 ~ 21090254 (+)
G3845 NA non-coding downstream 118007 22076992 ~ 22077458 (+)
G3863 NA non-coding downstream 211355 22170340 ~ 22172105 (+)
G3871 NA non-coding downstream 224258 22183243 ~ 22184811 (+)
G3878 NA non-coding downstream 238329 22197314 ~ 22200678 (+)
G3884 NA non-coding downstream 265733 22224718 ~ 22225101 (+)
G3799 med23 other upstream 26544 21922636 ~ 21923787 (+)
AMCG00003853 NA other upstream 48466 21890523 ~ 21901865 (+)
G3771 NA other upstream 189701 21745850 ~ 21760630 (+)
G3751 NA other upstream 400798 21549201 ~ 21549533 (+)
AMCG00003828 ctgf,ctgfa,moxd1,LOC106571301,LOC107683930,LOC106571350 other upstream 2552645 19271965 ~ 19397686 (+)
AMCG00003874 NA other downstream 724031 22683016 ~ 22769227 (+)
AMCG00003884 NA other downstream 1373616 23332601 ~ 23338241 (+)
AMCG00003891 NA other downstream 1562841 23521826 ~ 23533875 (+)
AMCG00003898 LOC105418227,LOC108432361,LOC107549029,LOC107708771,LOC107571650,LOC107756347,LOC107656533 other downstream 1751044 23710029 ~ 23726144 (+)
AMCG00003902 NA other downstream 1879604 23838589 ~ 24042885 (+)

Expression


Co-expression Network