AMCG00004368


Basic Information

Item Value
gene id AMCG00004368
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 44714025 ~ 44732599 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00004368
AGCCCAGGTCGACAGAAGGTGCCCAGGGCGGGGGCTTCCTATGGACGGCTGAAGGGGGTCCCCGAGGGGCCTTCCTCACTGGAGGAAGACCTGCACCTCAGTCTGTGGGACTCCCTGGAGTCCGACACCGAGAGCCTGGCCCAGGAGAGGCGATACCAGCTGGAACTGCAGAAGCGGATCCATGAGAGCAAGGAACTGCTGCTGAACCctgcggaggaggaggaggagagggaggaaggggagcagatGCAGGGGGGCTTCAGCAGACATGACAGTGGcgaggatgaggaggaagaggaggaggaggagagctaTGTGTTTGACAGCCTGGATGGAGTGGCTTTCAGGCCAGAGCAGAGACAGCCAGCATCAGATGACACACAGCCACGGGACGGGGCTCTGCAGGAGGGCACGGAGAGGACAAGTCAGGCCCACTGGGAGGATGAGTACGCAGAGCTGCGATACGACCCCAACTGGAGAAACAACTTGCAGGGAGCTGGGGTCTTCAGGGAGGACCAAGACCAGCCTGCCGCCAGCCCTGAGGAGACACGGGCACTTGGAGAGCCCAGGGAGGTGGCAGGGCTGGAGGTGAGCGGGGTGCGGGCGAGAGGGCAGCACAGCAGCCCATGTGTCCGCTTTAATGTGAGCGGGactgacaggcagacagacacctTGACCAGGCCGCCTCTCACTCCCCACCACCCCGGGCGTGGAAAGCCCCGTGAGGCTCTACAGCAGGAGGGCCCTGTGAGGAGCAGGGCTGGCAGGGCTCCCCGAAAGCAGGAACCAGAGCCTCCATGGGACGATCCTGTTGAGCTGTTCTCGGACAACAGAGAGGAGCGCTTTGATCAGCTGTACCACAACTACAGCAGGCAGCAACAGCGCACCCTGCAGCCGGAGCCTGGGTGGGGCGGCAGCCACCAGCCCTGTGCAAACAAGCAGCACAATAAGAGAGAGAGCCACGCTCATCGATCACGGGCCAACCCCCCAGGCCCCCGGCAGGACTTTGTGGAGCGCAACAAGCAGACCCTGGGGGTTAGTGCCCCCAAGCCAGGCTCGTACCTGCACACTCACGGCACCAGGAGGGAACAGAGTCACATCACACAGGTGATAGAAGCTGCAcaagagagcagcagcagccaggAGGGTGAAGAGAGCAACTCTGACCCAGAATATAGGTGGCAACGGAGAACACAGAAGCTGAAGGGATTCAGAGGGAAAGCGTCAGAGAGGCGAGGCCTACGTGCCACCTTCAGTGAAAAGAAGCCCTCCTGCATGCCAGGCACCCGGAACCCCTGGGGGGACGGTGCACCTTGGGGGAGCGAACAGACTCAGGCCCTGAACAGCCCCAGGGGGATACACGCGgcgcagaggagagagaggacagtCAGCGTGGGCAGGGCCCAGGTCCTGGTGATTGAGGAGGTAGATGGTCACGGGGCTGGAGCTGCACAGGACCTGGGCAACTCCCGCTCATCAGGAGTGTCAGCTGCCCCCTGGCCCAGCGACACGGCAATGGATCGCAGGGCCCCCGCGCTGCACCTGAACATCAACCTCAACACTTCTGCTGACCTGGTGCCCTACATCCCACACAGGCCCAGAGGCCCCACTCTACCCCCTCCTTATCCTGCCGGCAACTGGGCTGCAGACAGGGCAATGGAGGACCACAGAGCAAGGTTCACACTTCCACAATGGCAGGACCACACCCTCTCCCTAGGCTCCCAGGAGCCGGATGACCAGGCACACACTTACAGTCTGGGCTCTCAGGGGTCAAGGTCCTACGCTGTCCTGCCTCCTATTGGCCACACAGCAGGCAGTGACTCGCAGCTGAGTGGGCGAGCACGGGGGCACCTGAGAGGCGACATGCAGCGCAGCAGCTCAGAGGGGTACCTGGCCCAGCTGGAGAAACAGAAGCAGCTGAAGGAGAGAGCCAACTACAAGGCCTACACGCTGGAAGACTACAGGAACTTCAAGCAGGACGTGAAGCTTGGAGGTCTCGGACCCAATCACCAGGTGTCTGAAGAGACTGCGGAGAAGATGAGGCGCCAGAGGCAGTACTCAGAGCTGGTCCGGCAGCAGAACAGGACACTCAACAGAAACCCTCTCCAGCCCTCCAGTGTCCCAGCAGGCAAAGAGAGCCGGCCCTGTGCTCCTCGGAGGAAGGCTCTGGAGTATGCCAAGAACATTCCCAAACCCAGGCCGCCCCCTCAGCCCAAGGCCAATGAGAAGGCAGGAAGGATGGGCTACACTGAGCATACCCAGTACTTGGAGGACTTGGATCTGTCCCAGCTTGCAACGCTGGAGATACTACAGAAGAGACATGAAGAGGAGAAACAAATAGTGGCCAATTTGAAAGCCTTACATGCCATCTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00004368 True 2373 mRNA 0.61 8 44714025 44732599

Neighbor

gene id symbol gene type direction distance location
AMCG00004367 LOC107691633,LOC105921217,LOC103395053 coding upstream 2451 44708013 ~ 44711574 (+)
AMCG00004352 NA coding upstream 161892 44549432 ~ 44552133 (+)
AMCG00004353 NA coding upstream 201699 44511847 ~ 44512326 (+)
AMCG00004354 NA coding upstream 215118 44498428 ~ 44498907 (+)
AMCG00004351 NA coding upstream 302974 44410599 ~ 44411051 (+)
AMCG00004374 NA coding downstream 336316 45068915 ~ 45096943 (+)
AMCG00004375 NA coding downstream 393325 45125924 ~ 45143449 (+)
AMCG00004378 NA coding downstream 569966 45302565 ~ 45307246 (+)
AMCG00004379 NA coding downstream 1089302 45821901 ~ 45859274 (+)
AMCG00004384 NA coding downstream 1249026 45981625 ~ 45999108 (+)
G7662 vps11,LOC107588528,LOC107578557,LOC107691631 non-coding upstream 96626 44616316 ~ 44617399 (+)
G7644 NA non-coding upstream 126041 44587706 ~ 44587984 (+)
G7638 NA non-coding upstream 139028 44574331 ~ 44574997 (+)
G7614 NA non-coding upstream 170882 44530340 ~ 44543143 (+)
G7584 NA non-coding upstream 377344 44336451 ~ 44336681 (+)
G7765 NA non-coding downstream 1186791 45919390 ~ 45921805 (+)
G7879 NA non-coding downstream 1657789 46390388 ~ 46390751 (+)
G7906 NA non-coding downstream 1983179 46715778 ~ 46717255 (+)
G7911 NA non-coding downstream 1989230 46721829 ~ 46723088 (+)
G7949 NA non-coding downstream 2259618 46992217 ~ 46997805 (+)
AMCG00004355 hyou1,LOC100380749 other upstream 73293 44618185 ~ 44640732 (+)
G7329 fabp7,LOC108247051,LOC104945778 other upstream 2022916 42688779 ~ 42691109 (+)
AMCG00004304 NA other upstream 2497663 42210430 ~ 42216362 (+)
G7094 NA other upstream 3206794 41459576 ~ 41507231 (+)
AMCG00004257 dusp10,LOC106607590 other upstream 4372790 40326410 ~ 40341235 (+)
AMCG00004380 NA other downstream 1229411 45962010 ~ 45968306 (+)
G7999 NA other downstream 3414289 48146888 ~ 48147156 (+)
AMCG00004421 NA other downstream 4164518 48897117 ~ 49026355 (+)
G8099 NA other downstream 4199851 48932450 ~ 48934095 (+)
AMCG00004424 NA other downstream 4310991 49043590 ~ 49060055 (+)

Expression


Co-expression Network