AMCG00004378


Basic Information

Item Value
gene id AMCG00004378
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 45302565 ~ 45307246 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00004378
ATGAACAGTAGGCTGGAAGCTGAGTTGGTGATGCTCAAGTCAAACTACCAGTACAGCAGCTGTGGGGATGTGGTGGATCTACTGAAGACAATGGTGCCTGAGAATGATTGTAAGACACTCTTTAATGGAGCCCTGCTCGGGGAATCTCCTGTCTTAAGACAGAGAGTCCTGACCTTGGTCCAGCAGCATGCTTTTGGGACTGACCTGAATGGCGTCTGTGGGCCCAATCCCTTTGCATGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00004378 True 240 mRNA 0.50 4 45302565 45307246

Neighbor

gene id symbol gene type direction distance location
AMCG00004375 NA coding upstream 159116 45125924 ~ 45143449 (+)
AMCG00004374 NA coding upstream 205622 45068915 ~ 45096943 (+)
AMCG00004368 NA coding upstream 569966 44714025 ~ 44732599 (+)
AMCG00004367 LOC107691633,LOC105921217,LOC103395053 coding upstream 590991 44708013 ~ 44711574 (+)
AMCG00004352 NA coding upstream 750432 44549432 ~ 44552133 (+)
AMCG00004379 NA coding downstream 514655 45821901 ~ 45859274 (+)
AMCG00004384 NA coding downstream 674379 45981625 ~ 45999108 (+)
AMCG00004387 msantd2,LOC107588693 coding downstream 873292 46180538 ~ 46187407 (+)
AMCG00004388 NA coding downstream 929111 46236357 ~ 46254391 (+)
AMCG00004390 thyn1 coding downstream 978204 46285450 ~ 46289245 (+)
G7662 vps11,LOC107588528,LOC107578557,LOC107691631 non-coding upstream 685166 44616316 ~ 44617399 (+)
G7644 NA non-coding upstream 714581 44587706 ~ 44587984 (+)
G7638 NA non-coding upstream 727568 44574331 ~ 44574997 (+)
G7614 NA non-coding upstream 759422 44530340 ~ 44543143 (+)
G7584 NA non-coding upstream 965884 44336451 ~ 44336681 (+)
G7765 NA non-coding downstream 612144 45919390 ~ 45921805 (+)
G7879 NA non-coding downstream 1083142 46390388 ~ 46390751 (+)
G7906 NA non-coding downstream 1408532 46715778 ~ 46717255 (+)
G7911 NA non-coding downstream 1414583 46721829 ~ 46723088 (+)
G7949 NA non-coding downstream 1684971 46992217 ~ 46997805 (+)
AMCG00004355 hyou1,LOC100380749 other upstream 661833 44618185 ~ 44640732 (+)
G7329 fabp7,LOC108247051,LOC104945778 other upstream 2611456 42688779 ~ 42691109 (+)
AMCG00004304 NA other upstream 3086203 42210430 ~ 42216362 (+)
G7094 NA other upstream 3795334 41459576 ~ 41507231 (+)
AMCG00004257 dusp10,LOC106607590 other upstream 4961330 40326410 ~ 40341235 (+)
AMCG00004380 NA other downstream 654764 45962010 ~ 45968306 (+)
G7999 NA other downstream 2839642 48146888 ~ 48147156 (+)
AMCG00004421 NA other downstream 3589871 48897117 ~ 49026355 (+)
G8099 NA other downstream 3625204 48932450 ~ 48934095 (+)
AMCG00004424 NA other downstream 3736344 49043590 ~ 49060055 (+)

Expression


Co-expression Network