AMCG00004462 (slc37a4,LOC106612980,LOC107670393,LOC107593481)


Basic Information

Item Value
gene id AMCG00004462
gene name slc37a4,LOC106612980,LOC107670393,LOC107593481
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 50199505 ~ 50212190 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00004462
CAAAATGTAGATCTTGCACGTCCACTAgcgtttttatatatacatattgatcTAGCTTTACTGCAGAGGAAACGTTTGCATTGTATGAATAGGTGTGTTACTTCTTCAATGAACGGGTACTATTTGTGTCAGgttttttctgaaaatgcagTCGTGCCTTCGGTGTATGGATATGCTAACAGTTGTACACTCTTTATCGGCTACTGTTAATATGTCATAAAGACGTAAATCTCTATTTTCACCAGGTATGTCAACTCGGAGACCATTGGCTgTCCTTGCTGCTCTTTGCTTTCACCGCTCCCCCAATCACAAGGAGGCGCTGGCCAGCCCTGCGGTCACCGTTGGACTCCTAGGGTGAATCATTAActggagagaaaaggaaaacagacttGATAACATCCAGAGAGCAAACAGCAGTACTGGCTGGAGACAAACACGgaggaacagaaaaatcagTACAGCAAAGAATCAAGCACCCAAAGAAGCCAGCAAGGGAacgagagaaagaaagagacagtgATAAACACAGTCACCACGGCCCTCTCCTGCAGCAGCCACCTAAAAGCCAGATTAAAACCCAGTCTGACAAATTAGATGTGCTCCACTCTCCAGTGTGTGACCCTTCTTGCCGCCCTTTTTGCACAGGTCTGAAGACATAACTGAGCTGAAGTGTACTCCGTCAGAGCTGGGATTGATTGACCATTAACCCTCCTATTGATTGCACCATTGTTCTCCATGTAACCTTCTCTGCACTGTACCCAGGGCTCAGACACAAAGTTCACTGTGCTCTGCCATATCAGTGTCAGACTCTCAGGCTGGAGCAGAACAGAGCCAGTTGGGCTTAAAGCtgtgttcattttgtactgCTTTTATTCCTCTTCTctactgttttttaaattcttgtACAACATTGTTCTGGAACTGAGGGAACCATGGGGGCGACGGGATATGGATATTACCGCACCACCATTTTTCTGGCCATGTTTGTGGGCTACACGTTGTACTACTTCAACCGAAAGACTTTCTCCTTCGTAATGCCGTCGGTCATGGAAGAGGTTGAACTGGATAAAGATGACTTGGGTCTCATCACCAGCAGTCAGTCGGCAGCCTACGCCATCAGTAAGTTCATCAGTGGCGTGCTGTCAGACCAGATCAGCGCCCGCTGGCTCTTCTCCATCGGCCTTTTCCTGGTGGGCACCATAAACGTGGTCTTCTCCTGGTCCTCCAGTGTGGCCATGTTTGCAGTGCTGTGGTTCATCAACGGGCTGGGCCAGGGTCTGGGCTGGCCACCTTGTGGGAAGGTGCTGCGCAAGTGGTTCGAGCCGTCTCAGTTCGGGACCTGGTGGGCAGTGCTGTCCTGCAGTATGAACCTGGCAGGGGGGCTAGGCCCACTCATCGCCACAGTGATGGCACTCAGCTACAGCTGGAGGACCACATTGTCCCTGTCCGGCTTGGCCTGCATGGTCACTGCCTTCTTCTGCCTGCTGTTCATAAAGAACGAACCCTCTGACGTGGGGCTGGCCAACATCGAGCATGGCAGCAAGAAGGGCAAGCGAGgCCCCTCTAATGATGACAGCACACTGAAGGAGTTCCTCCTATCCCCCTACCTGTGGGTGCTGTCTTTCGGGTATCTTGTGGTGTTTGGGGTGAAGACGGCCTGCACCGACTGGGGGCAGCTCTTCCTCATCCAGGACAAGGCTCAGTCCGCCCTCATGGGCAGCTCTTACATGAGCGCCCTGGAAGTGGGAGGACTGGTGGGCAGTCTGGCCGCAGGATTCCTCTCTGACAGGGCGGTCGCTCGGAATGGTCTGCGAACCCATGGCAATCCTCGCCACAGCCTCTTGCTGTCCATGATGGCTGGGATGTGCTTGTCCATGTATCTTTTCCGGGTTACAATCACCCCCGAAAGCTCCAAGGTTTGGATTCTTACTCTGGGGGCTTTGTTTGGCTTCTCCTCATATGGACCAATCGCTTTGTTCGGGGTGATAGCCAACGAGAGTGCTCCGTCTAATTACTGTGGGACGTCACACGCCATTGTGGCTCTGATGGCCAATGTGGGCGGATTCCTCGCCGGACTCCCCTTCAGCTCCATTGCCAAGCACTACAGCTGGGACGTGGCATTCTGGGTAGCAGAGATCACCTGCGGCATCACGACCATCTGCTTCTTCCTGCTGCGCAACATGCGCACCAAGATGGGCCGGCTGCCCAGGAAGGCAGACTGAATGCAAACCCACCTGCCCCTCAACAGCCAATGAGAAGGGATCGTGTGCTCAACGAACACACTTAGCGTAgcgacacagacacacacattgtttcCCTCCTTTGTCAACGGTTGCTTGGCAGGTTGACTCACAAACCAGTACAAATTCTAGAAATCACAACACTGCCACCCAAGGGCCCCTTGCAAGCTTCACAAGAGGTTTTAGGATTATTTATTGAGGACACAACAATAGCCAAAGTAagaataatagtagtaataatcaTGTTCACGATAATGTACCTTATAACTTCTGTCATACAACTGATCTGTGGCACAGTCATGACTTGTACACATGCGCACCTTTCATTTTACTGTATGTACAAGTCACCTATAAGGAGGGGTCATTAAAAGCATTgtcatggttttaaaatattgaagtcATCTACAGTAAAGATCCCTACCTCCATTTCAAAAGGTGGAGGTATAAAGCTACCTGTATGCCTTTTGAAACACGCACTAGGTACAGTGTCGAGAGTCATCTGCTCGTTTTTTGAGAAGCAGCAAACTGTTTTTTGTGCCTTTATTTTACCAGCTCCTCATTCATGAGGCTTCCATCTATTCAGTACTAGGCCTGGATTCAATCCAAACTAAACCCACCTGCTAATCCTAAATCCAACCCCAGTCAGTGCTTGAGTGCCGCACCATGGTTTTATTTGGAAGTGACAGCTCATATGCACTGTGTGGGCTCCACAGTTTGTCACAGTATGTGAGTTGTGTTGTTAGGTATGTTGTCATGCAGCTCTTTTCTGAACAACAGACCAAagaaatttaaagaaaaaaacacaaaggagaCCACGGCACATTTTATCTGAAATTAcctgatgttttaatttgtatcaatGCACtcaattggaaaaaaaaggaCAAGAAAATGACTTATTTTTTACTTGTAAATTATTTCTGTTTACAATCATGAGACAGAGTTAGCACTGTGGTGTAGACATAAGAATATAGTATTTTAATCTATTGTAATTCAAAGCTGTTGACAGTGTGTTTGAAAGagaagtgttattttgttttcatcatctCAGTGTTAACTGGTGAACCACTGGATTTAAAGGGATAGTCACACATACATGTggttttccagttttattctCAAAGGATTACATATGTGTACTGTACAATGACAATGGAAAATGATTCATGACATGAATGAATCACATTGCTGCACATTTGCCAGATACACTTTATTAATCCACCTTCACCTCCATCCTAGAGATCAATAACTTAAGTCTCCACTAAAGGGGTGCATCTTATCTCTCAATCAGTCAGTGCCTAAGTCCCTGACTGTCCCAgttactgattaaaataaatataggccCAGATTCTTAATCTAAACTTCAACCCATGCTGCAACTCCCAATTCCAGTCTCCAGTACGTGGCTTTTAATGTCATATATGCATGAAGCAGACAAACAGAGCTGGATTCAAGTATCGGGCTTAGATTTGGAATATGCCACTGCCATTTGTGtcaaagtttttaattaaactggaatGTAAATAATCAGATTAAGGAATGTGTTTAAAATCTACAAAAGGGAAATGAATTTGAACAAGCACCACAACTGGATTGCCCTGTGTTATTGTGAATATGAAAACCTTGCCAGAACTAAGTCATCTATAGACAAAAAGCTTTATTTCTTCCACTTCCACCCTCTcaactgttattttaattaactgttttCCTGTGACTATAGTTTTAAAAGaatacttttaaatttaaaatcaaagtagctattttttttaaattgccagTGTATTTATAATGACTGTACAAAACTAAGTCATTCAGACACTGTATACAGAGAACTAACACTAATAAAGTGTCACAGCCATGTGGTTTAAATTTGGTTTGTCTCTGTGTCCATCCTTTCTTTTCCTTGATAGTACCTTTAATAATGCATAGGAAAATTTCAGAACATTTCCAAATTgagattcagtttttttttttaatgcagatatTTGGAAATCCTACTTAACAGGTTTCCTGAAATGCAATAACCTCTTAGTCTTTGCATAGGGgcaacacataaatacaaatcagattTATTGTAGGAGCAGTTTTTGCGGTGTTAACAGAACCCACTACACAAAGCTAATGACAGTCAATGGAAAGGCTGTATGTAGCAGCTGTAGAACATCACATGATTAGACAAGGCAAATTACTTCTAggtactttatttatacattatttacagattCGTATTCAAGGGAACTTgcacattcatatttacaatGCAGTGTGAAGACCACAAAAGAGTTTAGGTTGATGGAGGCAGATATCAGGTATGGTTttagttcacacacacacaaaaatttAGTTTTACAAAGCCCAAGATCACTTTGGACgattaagtttaatttaataggACTCTTTAGGATAtcatattttcttgtattttaaaaggataaGACTTTAAATTATCTCCAGTGAGGCAGGCTGCAGCTTTTCACCCCATATCCACAAATCAGCCCAAGTGGTTTTCTTCATACAGAGTTGAGAATTGCTTCACACAAAACCCCAGAAACGGGATCCCGCTGGCTCACTGCACCTGCTCTCAGCCCCACACTTGATCACGACCCTGGGCCAAACGTCCCCGCTTTCTCTGCAACCTCAAGGGAAGCCTTCAGATTCTGGTCAAAGAGCTCACACCTGATGGGCATCTCCAGAGAGTAAAAGGGGTTTTTGAGAGCGAAGTCAGAATAGATCTCGTAGATCTTTCGCAGCAGAGCATCAATCCCAGCCTGTCGAGGGTCTGCCAGCACTATGAACTTTATACCTGTGAGCGTCTGGAAGCAGTGCAGTTTAAACGTGTCAGTCTCCAGCATTTCAATCCCAGAGCTTCCCACCTCGGGCGACAACTGGGAGCCGATGGCAAACAGCCtgTGAAACATGGAGGCCAGCATCAGTTTCTCATTGGAGCTCAGTCGTGCCCGGCCGAACCGGATAGAGACGGGGTAGTTGGCCGGATCCTTCAGGTACTCGATGATCTCCTTCCCGTCTCCCGTGTACCTCCCGTTGACATCCACGCCGTTAATGGAGAGCACGGCATGGCCCACTCGGATCCCGTCCCGCTGGCCAAAGGAAACGATCACCCTTTCATCGTGGGTCTTCAGGACCAGATCCAAGGGGTAGCTGAAAGTCTTTTCGGCCTCTGCACGGGGCACGTAGTTGTCATATTGGTAGATTAATCCACCGGCTTTATTTACGACGTAAACACTGAAAATCGCCATGTTTACACGGACGCTCCTCCCCAGCTCACTGCATTACGTCTCTGCCGGAAAGGGCGTTGCTCTACAGTAAagcactacatttcccagaaacCCCTCGGGTCCGCCTGTTAAACTTCCGCGTTTCACGGATGTGCG

Function

symbol description
slc37a4 Enables glucose 6-phosphate:inorganic phosphate antiporter activity and glucose-6-phosphate transmembrane transporter activity. Involved in glucose homeostasis; glucose-6-phosphate transport; and phosphate ion transmembrane transport. Is integral component of endoplasmic reticulum membrane.

NR:

description
PREDICTED: glucose-6-phosphate translocase

GO:

id name namespace
GO:0055085 transmembrane transport biological_process
GO:0016021 integral component of membrane cellular_component
GO:0005215 transporter activity molecular_function

KEGG:

id description
K08171 SLC37A4; MFS transporter, OPA family, solute carrier family 37 (glycerol-6-phosphate transporter), member 4

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00004462 True 5632 mRNA 0.45 13 50199505 50212190

Neighbor

gene id symbol gene type direction distance location
AMCG00004459 NA coding upstream 12012 50184702 ~ 50187493 (+)
AMCG00004458 NA coding upstream 63671 50121429 ~ 50135834 (+)
AMCG00004455 LOC107601691 coding upstream 167163 50004310 ~ 50032342 (+)
AMCG00004453 kmt2a coding upstream 209841 49989275 ~ 49989664 (+)
AMCG00004448 LOC108233819,LOC107098727 coding upstream 212014 49984727 ~ 49987491 (+)
AMCG00004464 rps25,LOC107758587,LOC107583381,LOC107679519,LOC107565279 coding downstream 27 50212217 ~ 50214554 (+)
AMCG00004468 NA coding downstream 46641 50258831 ~ 50265447 (+)
AMCG00004469 tbrg1 coding downstream 60352 50272542 ~ 50281575 (+)
AMCG00004473 LOC100709321,LOC106581230,LOC102786114,LOC104941976 coding downstream 408789 50620979 ~ 50630765 (+)
AMCG00004472 ilvbl,LOC107758073,LOC107670636 coding downstream 449272 50661462 ~ 50670585 (+)
G8380 cbl,LOC102793573 non-coding upstream 27554 50171520 ~ 50171951 (+)
G8376 NA non-coding upstream 49963 50149325 ~ 50149542 (+)
G8375 cbl non-coding upstream 50384 50148884 ~ 50149121 (+)
G8374 NA non-coding upstream 51310 50147876 ~ 50148195 (+)
G8373 NA non-coding upstream 53682 50145371 ~ 50145823 (+)
G8443 NA non-coding downstream 72235 50284425 ~ 50288071 (+)
G8509 NA non-coding downstream 483034 50695224 ~ 50695567 (+)
G8538 NA non-coding downstream 546885 50759075 ~ 50759360 (+)
G8596 NA non-coding downstream 758766 50970956 ~ 50971302 (+)
G8605 NA non-coding downstream 902390 51114580 ~ 51114852 (+)
G8377 NA other upstream 41786 50151264 ~ 50157719 (+)
AMCG00004449 NA other upstream 247972 49938552 ~ 49951533 (+)
AMCG00004442 NA other upstream 385481 49806361 ~ 49814024 (+)
AMCG00004425 zbtb44,LOC106580932,LOC106612543,LOC102781915 other upstream 880670 49298736 ~ 49318835 (+)
AMCG00004424 NA other upstream 1139450 49043590 ~ 49060055 (+)
AMCG00004463 NA other downstream 24487 50236677 ~ 50243043 (+)
AMCG00004477 NA other downstream 529198 50741388 ~ 50753432 (+)
G8606 NA other downstream 902751 51114941 ~ 51115262 (+)
AMCG00004501 NA other downstream 1727359 51939549 ~ 51946818 (+)
AMCG00004509 NA other downstream 1777163 51989353 ~ 52013630 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location