Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00004576 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030121.1 |
| NCBI id | CM030121.1 |
| chromosome length | 57050121 |
| location | 54011849 ~ 54012342 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00004576 | True | 381 | mRNA | 0.46 | 2 | 54011849 | 54012342 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00004568 | NA | coding | upstream | 148632 | 53849628 ~ 53863217 (+) |
| AMCG00004566 | NA | coding | upstream | 163795 | 53826947 ~ 53848054 (+) |
| AMCG00004564 | NA | coding | upstream | 292074 | 53717067 ~ 53719775 (+) |
| AMCG00004565 | NA | coding | upstream | 303882 | 53707094 ~ 53707967 (+) |
| AMCG00004555 | NA | coding | upstream | 716638 | 53293103 ~ 53295211 (+) |
| AMCG00004577 | NA | coding | downstream | 4019 | 54016361 ~ 54024156 (+) |
| AMCG00004578 | NA | coding | downstream | 64822 | 54077164 ~ 54100748 (+) |
| AMCG00004580 | aplp2,LOC102785027 | coding | downstream | 245226 | 54257568 ~ 54281403 (+) |
| AMCG00004586 | NA | coding | downstream | 282592 | 54294934 ~ 54302577 (+) |
| AMCG00004584 | NA | coding | downstream | 295906 | 54308248 ~ 54311938 (+) |
| G9170 | NA | non-coding | upstream | 29866 | 53933169 ~ 53981983 (+) |
| G9160 | NA | non-coding | upstream | 145402 | 53864940 ~ 53866447 (+) |
| G9043 | NA | non-coding | upstream | 711977 | 53299663 ~ 53299872 (+) |
| G9000 | NA | non-coding | upstream | 866055 | 53145595 ~ 53145794 (+) |
| G8987 | NA | non-coding | upstream | 892153 | 53117197 ~ 53119696 (+) |
| G9191 | NA | non-coding | downstream | 484 | 54012826 ~ 54013029 (+) |
| G9243 | NA | non-coding | downstream | 191879 | 54204221 ~ 54204990 (+) |
| G9244 | NA | non-coding | downstream | 193676 | 54206018 ~ 54206971 (+) |
| G9245 | NA | non-coding | downstream | 194809 | 54207151 ~ 54207360 (+) |
| G9246 | NA | non-coding | downstream | 195279 | 54207621 ~ 54207935 (+) |
| G9129 | NA | other | upstream | 150321 | 53677564 ~ 53861528 (+) |
| G9128 | NA | other | upstream | 167990 | 53648011 ~ 53843859 (+) |
| G9132 | NA | other | upstream | 244739 | 53766543 ~ 53767110 (+) |
| AMCG00004563 | NA | other | upstream | 341327 | 53636039 ~ 53670522 (+) |
| G9118 | NA | other | upstream | 403951 | 53603761 ~ 53607898 (+) |
| G9197 | NA | other | downstream | 19689 | 54032031 ~ 54033307 (+) |
| AMCG00004585 | nfrkb,LOC107567165,LOC107715331,LOC107693532 | other | downstream | 301780 | 54314122 ~ 54327599 (+) |
| AMCG00004588 | NA | other | downstream | 334160 | 54346502 ~ 54354976 (+) |
| G9300 | sidt2 | other | downstream | 382449 | 54394791 ~ 54395300 (+) |
| AMCG00004595 | NA | other | downstream | 457676 | 54470018 ~ 54482791 (+) |
